RNA–Protein interactions for RNA: ENST00000572270.1

CCDC40-208, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 460 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-208ENST00000572270 TFRCP02786 760 aaKnown RBP16.85■□□□□ 0.29
CCDC40-208ENST00000572270 CTGFP29279 349 aa16.85■□□□□ 0.29
CCDC40-208ENST00000572270 TMPOP42166 694 aaKnown RBP16.85■□□□□ 0.29
CCDC40-208ENST00000572270 TNNI2P48788 182 aa16.85■□□□□ 0.29
CCDC40-208ENST00000572270 FKBP1AP62942 108 aaKnown RBP16.85■□□□□ 0.29
CCDC40-208ENST00000572270 MPHOSPH8Q99549 860 aa16.85■□□□□ 0.29
CCDC40-208ENST00000572270 UNC93B1Q9H1C4 597 aa16.85■□□□□ 0.29
CCDC40-208ENST00000572270 AOX1Q06278 1338 aa16.85■□□□□ 0.29
CCDC40-208ENST00000572270 ALPK3Q96L96 1907 aa16.84■□□□□ 0.29
CCDC40-208ENST00000572270 BCAMP50895 628 aa16.84■□□□□ 0.29
CCDC40-208ENST00000572270 SPDYE2Q495Y8 402 aa16.84■□□□□ 0.29
CCDC40-208ENST00000572270 ERO1BQ86YB8 467 aa16.84■□□□□ 0.29
CCDC40-208ENST00000572270 PHAXQ9H814 394 aaKnown RBP16.84■□□□□ 0.29
CCDC40-208ENST00000572270 PRDM6Q9NQX0 595 aa16.84■□□□□ 0.29
CCDC40-208ENST00000572270 ZNF70Q9UC06 446 aaPredicted RBP16.84■□□□□ 0.29
CCDC40-208ENST00000572270 DDX58O95786 925 aaKnown RBP16.83■□□□□ 0.28
CCDC40-208ENST00000572270 DUSP27Q5VZP5 1158 aa16.83■□□□□ 0.28
CCDC40-208ENST00000572270 ZNF804AQ7Z570 1209 aa16.83■□□□□ 0.28
CCDC40-208ENST00000572270 TDHQ8IZJ6 230 aa16.83■□□□□ 0.28
CCDC40-208ENST00000572270 TEPSINQ96N21 525 aa16.83■□□□□ 0.28
CCDC40-208ENST00000572270 METTL22Q9BUU2 404 aaPredicted RBP16.83■□□□□ 0.28
CCDC40-208ENST00000572270 TCP10L2B9ZVM9 353 aa16.82■□□□□ 0.28
CCDC40-208ENST00000572270 IRF6O14896 467 aa16.82■□□□□ 0.28
CCDC40-208ENST00000572270 FCGRTP55899 365 aa16.82■□□□□ 0.28
CCDC40-208ENST00000572270 PRKCZQ05513 592 aa16.82■□□□□ 0.28
CCDC40-208ENST00000572270 CDAN1Q8IWY9 1227 aa16.82■□□□□ 0.28
CCDC40-208ENST00000572270 C7orf61Q8IZ16 206 aa16.82■□□□□ 0.28
CCDC40-208ENST00000572270 TDRD3Q9H7E2 651 aaKnown RBP16.82■□□□□ 0.28
CCDC40-208ENST00000572270 SNCAIPQ9Y6H5 919 aa16.82■□□□□ 0.28
CCDC40-208ENST00000572270 VCANP13611 3396 aa16.82■□□□□ 0.28
CCDC40-208ENST00000572270 MGAMO43451 1857 aa16.82■□□□□ 0.28
CCDC40-208ENST00000572270 RPTORQ8N122 1335 aa16.81■□□□□ 0.28
CCDC40-208ENST00000572270 PPIL2Q13356 520 aa16.81■□□□□ 0.28
CCDC40-208ENST00000572270 NEUROD2Q15784 382 aa16.81■□□□□ 0.28
CCDC40-208ENST00000572270 NECAB2Q7Z6G3 386 aa16.81■□□□□ 0.28
CCDC40-208ENST00000572270 WRNIP1Q96S55 665 aa16.81■□□□□ 0.28
CCDC40-208ENST00000572270 TMEM39BQ9GZU3 492 aa16.81■□□□□ 0.28
CCDC40-208ENST00000572270 ZMYND8Q9ULU4 1186 aaPredicted RBP16.81■□□□□ 0.28
CCDC40-208ENST00000572270 ADGRA2Q96PE1 1338 aa16.8■□□□□ 0.28
CCDC40-208ENST00000572270 IL1R1P14778 569 aa16.8■□□□□ 0.28
CCDC40-208ENST00000572270 CHRNDQ07001 517 aa16.8■□□□□ 0.28
CCDC40-208ENST00000572270 PAWRQ96IZ0 340 aaKnown RBP16.8■□□□□ 0.28
CCDC40-208ENST00000572270 DEFB118Q96PH6 123 aa16.8■□□□□ 0.28
CCDC40-208ENST00000572270 JAG2Q9Y219 1238 aa16.8■□□□□ 0.28
CCDC40-208ENST00000572270 PDHXO00330 501 aa16.79■□□□□ 0.28
CCDC40-208ENST00000572270 ADCY3O60266 1144 aa16.79■□□□□ 0.28
CCDC40-208ENST00000572270 INHAP05111 366 aa16.79■□□□□ 0.28
CCDC40-208ENST00000572270 ITGA6P23229 1130 aa16.79■□□□□ 0.28
CCDC40-208ENST00000572270 ANKRD23Q86SG2 305 aa16.79■□□□□ 0.28
CCDC40-208ENST00000572270 SERPINA10Q9UK55 444 aa16.79■□□□□ 0.28
CCDC40-208ENST00000572270 C15orf52Q6ZUT6 534 aaKnown RBP16.78■□□□□ 0.28
CCDC40-208ENST00000572270 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.78■□□□□ 0.28
CCDC40-208ENST00000572270 ZKSCAN4Q969J2 545 aaPredicted RBP16.78■□□□□ 0.28
CCDC40-208ENST00000572270 HOOK2Q96ED9 719 aa16.78■□□□□ 0.28
CCDC40-208ENST00000572270 UBE2OQ9C0C9 1292 aaKnown RBP16.78■□□□□ 0.28
CCDC40-208ENST00000572270 TTF2Q9UNY4 1162 aaKnown RBP16.78■□□□□ 0.28
CCDC40-208ENST00000572270 FAM205AQ6ZU69 1335 aa16.77■□□□□ 0.28
CCDC40-208ENST00000572270 MAGEA10P43363 369 aaPredicted RBP16.77■□□□□ 0.28
CCDC40-208ENST00000572270 NEXNQ0ZGT2 675 aa16.77■□□□□ 0.28
CCDC40-208ENST00000572270 DZIP1LQ8IYY4 767 aaKnown RBP16.77■□□□□ 0.28
CCDC40-208ENST00000572270 PARK7Q99497 189 aaKnown RBP16.77■□□□□ 0.28
CCDC40-208ENST00000572270 GABRQQ9UN88 632 aa16.77■□□□□ 0.28
CCDC40-208ENST00000572270 MAP3K2Q9Y2U5 619 aa16.77■□□□□ 0.28
CCDC40-208ENST00000572270 IRS2Q9Y4H2 1338 aa16.76■□□□□ 0.27
CCDC40-208ENST00000572270 SYN1P17600 705 aa16.76■□□□□ 0.27
CCDC40-208ENST00000572270 PPATQ06203 517 aa16.76■□□□□ 0.27
CCDC40-208ENST00000572270 PAK6Q9NQU5 681 aaPredicted RBP16.76■□□□□ 0.27
CCDC40-208ENST00000572270 A0A1B0GUL6 1792 aa16.76■□□□□ 0.27
CCDC40-208ENST00000572270 SNAP23O00161 211 aa16.75■□□□□ 0.27
CCDC40-208ENST00000572270 TAF5LO75529 589 aa16.75■□□□□ 0.27
CCDC40-208ENST00000572270 ELNP15502 786 aa16.75■□□□□ 0.27
CCDC40-208ENST00000572270 MFSD14BQ5SR56 506 aa16.75■□□□□ 0.27
CCDC40-208ENST00000572270 UBE3BQ7Z3V4 1068 aa16.75■□□□□ 0.27
CCDC40-208ENST00000572270 PXYLP1Q8TE99 480 aa16.75■□□□□ 0.27
CCDC40-208ENST00000572270 DIS3LQ8TF46 1054 aaKnown RBP16.75■□□□□ 0.27
CCDC40-208ENST00000572270 CRISPLD2Q9H0B8 497 aa16.75■□□□□ 0.27
CCDC40-208ENST00000572270 SPTBN5Q9NRC6 3674 aaKnown RBP16.75■□□□□ 0.27
CCDC40-208ENST00000572270 EYSQ5T1H1 3165 aa16.74■□□□□ 0.27
CCDC40-208ENST00000572270 IGKV5-2P06315 115 aa16.74■□□□□ 0.27
CCDC40-208ENST00000572270 FLT3LGP49771 235 aa16.74■□□□□ 0.27
CCDC40-208ENST00000572270 DCAF15Q66K64 600 aa16.74■□□□□ 0.27
CCDC40-208ENST00000572270 ANKLE1Q8NAG6 615 aa16.74■□□□□ 0.27
CCDC40-208ENST00000572270 BCRP11274 1271 aa16.73■□□□□ 0.27
CCDC40-208ENST00000572270 COL9A1P20849 921 aa16.73■□□□□ 0.27
CCDC40-208ENST00000572270 CRKP46108 304 aa16.73■□□□□ 0.27
CCDC40-208ENST00000572270 CCER1Q8TC90 406 aaPredicted RBP16.73■□□□□ 0.27
CCDC40-208ENST00000572270 GUCD1Q96NT3 240 aa16.73■□□□□ 0.27
CCDC40-208ENST00000572270 TMOD2Q9NZR1 351 aa16.73■□□□□ 0.27
CCDC40-208ENST00000572270 TAOK2Q9UL54 1235 aa16.73■□□□□ 0.27
CCDC40-208ENST00000572270 ANKRD18BA2A2Z9 1011 aa16.72■□□□□ 0.27
CCDC40-208ENST00000572270 CWF19L2Q2TBE0 894 aaKnown RBP16.72■□□□□ 0.27
CCDC40-208ENST00000572270 FAM109BQ6ICB4 259 aaPredicted RBP16.72■□□□□ 0.27
CCDC40-208ENST00000572270 ZNF341Q9BYN7 854 aa16.72■□□□□ 0.27
CCDC40-208ENST00000572270 NBPF3Q9H094 633 aa16.72■□□□□ 0.27
CCDC40-208ENST00000572270 MBIPQ9NS73 344 aa16.72■□□□□ 0.27
CCDC40-208ENST00000572270 TRIM35Q9UPQ4 493 aa16.72■□□□□ 0.27
CCDC40-208ENST00000572270 PI4KAP2A4QPH2 592 aa16.71■□□□□ 0.27
CCDC40-208ENST00000572270 ELL2O00472 640 aaPredicted RBP16.71■□□□□ 0.27
CCDC40-208ENST00000572270 TNPO2O14787 897 aaKnown RBP16.71■□□□□ 0.27
CCDC40-208ENST00000572270 IRF5Q13568 498 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms