RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 NBPF9Q3BBW0 867 aa17.11■□□□□ 0.33
RPAIN-211ENST00000572174 HHIPL2Q6UWX4 724 aa17.11■□□□□ 0.33
RPAIN-211ENST00000572174 USP48Q86UV5 1035 aa17.11■□□□□ 0.33
RPAIN-211ENST00000572174 ZNF512BQ96KM6 892 aaPredicted RBP17.11■□□□□ 0.33
RPAIN-211ENST00000572174 ABT1Q9ULW3 272 aaKnown RBP17.11■□□□□ 0.33
RPAIN-211ENST00000572174 CRKP46108 304 aa17.1■□□□□ 0.33
RPAIN-211ENST00000572174 FKBP1BP68106 108 aa17.1■□□□□ 0.33
RPAIN-211ENST00000572174 RASGRF1Q13972 1273 aa17.1■□□□□ 0.33
RPAIN-211ENST00000572174 RHPN1Q8TCX5 695 aa17.1■□□□□ 0.33
RPAIN-211ENST00000572174 KLRG1Q96E93 195 aa17.1■□□□□ 0.33
RPAIN-211ENST00000572174 DOCK2Q92608 1830 aa17.1■□□□□ 0.33
RPAIN-211ENST00000572174 TRAF5O00463 557 aa17.09■□□□□ 0.33
RPAIN-211ENST00000572174 TNNI2P48788 182 aa17.09■□□□□ 0.33
RPAIN-211ENST00000572174 DZIP1Q86YF9 867 aaKnown RBP17.09■□□□□ 0.33
RPAIN-211ENST00000572174 C2orf69Q8N8R5 385 aa17.09■□□□□ 0.33
RPAIN-211ENST00000572174 SPATA5Q8NB90 893 aa17.09■□□□□ 0.33
RPAIN-211ENST00000572174 HHIPL1Q96JK4 782 aa17.09■□□□□ 0.33
RPAIN-211ENST00000572174 ZDHHC15Q96MV8 337 aa17.09■□□□□ 0.33
RPAIN-211ENST00000572174 ZNF408Q9H9D4 720 aa17.09■□□□□ 0.33
RPAIN-211ENST00000572174 CNTNAP1P78357 1384 aa17.09■□□□□ 0.33
RPAIN-211ENST00000572174 MYH7P12883 1935 aa17.08■□□□□ 0.33
RPAIN-211ENST00000572174 MYO5AQ9Y4I1 1855 aaKnown RBP17.08■□□□□ 0.33
RPAIN-211ENST00000572174 RASSF10A6NK89 507 aa17.08■□□□□ 0.32
RPAIN-211ENST00000572174 ECE1P42892 770 aa17.08■□□□□ 0.32
RPAIN-211ENST00000572174 SPDYE2Q495Y8 402 aa17.08■□□□□ 0.32
RPAIN-211ENST00000572174 ERICH6Q7L0X2 663 aa17.08■□□□□ 0.32
RPAIN-211ENST00000572174 AACSQ86V21 672 aa17.08■□□□□ 0.32
RPAIN-211ENST00000572174 SIRT2Q8IXJ6 389 aa17.08■□□□□ 0.32
RPAIN-211ENST00000572174 TLL2Q9Y6L7 1015 aa17.08■□□□□ 0.32
RPAIN-211ENST00000572174 ADM5C9JUS6 153 aa17.07■□□□□ 0.32
RPAIN-211ENST00000572174 IFIT2P09913 472 aaKnown RBP17.07■□□□□ 0.32
RPAIN-211ENST00000572174 GSTO1P78417 241 aa17.07■□□□□ 0.32
RPAIN-211ENST00000572174 TMED8Q6PL24 325 aaPredicted RBP17.07■□□□□ 0.32
RPAIN-211ENST00000572174 CDCA5Q96FF9 252 aa17.07■□□□□ 0.32
RPAIN-211ENST00000572174 DBNDD2Q9BQY9 259 aa17.07■□□□□ 0.32
RPAIN-211ENST00000572174 LRRCC1Q9C099 1032 aa17.07■□□□□ 0.32
RPAIN-211ENST00000572174 GBA2Q9HCG7 927 aaPredicted RBP17.07■□□□□ 0.32
RPAIN-211ENST00000572174 ABCF2Q9UG63 623 aa17.07■□□□□ 0.32
RPAIN-211ENST00000572174 ASTN2O75129 1339 aaPredicted RBP17.06■□□□□ 0.32
RPAIN-211ENST00000572174 PRDX5P30044 214 aa17.06■□□□□ 0.32
RPAIN-211ENST00000572174 DEFB115Q30KQ5 88 aa17.06■□□□□ 0.32
RPAIN-211ENST00000572174 PRMT6Q96LA8 375 aaPredicted RBP17.06■□□□□ 0.32
RPAIN-211ENST00000572174 VEZTQ9HBM0 779 aa17.06■□□□□ 0.32
RPAIN-211ENST00000572174 ZBTB47Q9UFB7 747 aaPredicted RBP17.06■□□□□ 0.32
RPAIN-211ENST00000572174 DBNLQ9UJU6 430 aaKnown RBP17.06■□□□□ 0.32
RPAIN-211ENST00000572174 THSD7BQ9C0I4 1608 aa17.06■□□□□ 0.32
RPAIN-211ENST00000572174 LDHCP07864 332 aa17.05■□□□□ 0.32
RPAIN-211ENST00000572174 MCAMP43121 646 aa17.05■□□□□ 0.32
RPAIN-211ENST00000572174 SUPT20HL1Q3ZLR7 823 aa17.05■□□□□ 0.32
RPAIN-211ENST00000572174 FKBP1CQ5VVH2 108 aa17.05■□□□□ 0.32
RPAIN-211ENST00000572174 CST9Q5W186 159 aa17.05■□□□□ 0.32
RPAIN-211ENST00000572174 DNAJC5GQ8N7S2 189 aa17.05■□□□□ 0.32
RPAIN-211ENST00000572174 EAF2Q96CJ1 260 aaPredicted RBP17.05■□□□□ 0.32
RPAIN-211ENST00000572174 HOOK2Q96ED9 719 aa17.05■□□□□ 0.32
RPAIN-211ENST00000572174 CRBNQ96SW2 442 aa17.05■□□□□ 0.32
RPAIN-211ENST00000572174 DEFB129Q9H1M3 183 aa17.05■□□□□ 0.32
RPAIN-211ENST00000572174 HMG20BQ9P0W2 317 aa17.05■□□□□ 0.32
RPAIN-211ENST00000572174 ZNF70Q9UC06 446 aaPredicted RBP17.05■□□□□ 0.32
RPAIN-211ENST00000572174 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.05■□□□□ 0.32
RPAIN-211ENST00000572174 MAP4K4O95819 1239 aaPredicted RBP17.04■□□□□ 0.32
RPAIN-211ENST00000572174 SAPCD2Q86UD0 394 aa17.04■□□□□ 0.32
RPAIN-211ENST00000572174 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.04■□□□□ 0.32
RPAIN-211ENST00000572174 NOL10Q9BSC4 688 aaKnown RBP17.04■□□□□ 0.32
RPAIN-211ENST00000572174 IL1RAPL2Q9NP60 686 aa17.04■□□□□ 0.32
RPAIN-211ENST00000572174 LRP2BPQ9P2M1 347 aa17.04■□□□□ 0.32
RPAIN-211ENST00000572174 CEP350Q5VT06 3117 aa17.04■□□□□ 0.32
RPAIN-211ENST00000572174 RPAP1Q9BWH6 1393 aaPredicted RBP17.03■□□□□ 0.32
RPAIN-211ENST00000572174 FOCADQ5VW36 1801 aa17.03■□□□□ 0.32
RPAIN-211ENST00000572174 CLRN2A0PK11 232 aa17.03■□□□□ 0.32
RPAIN-211ENST00000572174 APBB1O00213 710 aa17.03■□□□□ 0.32
RPAIN-211ENST00000572174 HTRA3P83110 453 aa17.03■□□□□ 0.32
RPAIN-211ENST00000572174 TTF1Q15361 905 aaPredicted RBP17.03■□□□□ 0.32
RPAIN-211ENST00000572174 PAXIP1Q6ZW49 1069 aaPredicted RBP17.03■□□□□ 0.32
RPAIN-211ENST00000572174 ARMC9Q7Z3E5 817 aa17.03■□□□□ 0.32
RPAIN-211ENST00000572174 GPATCH3Q96I76 525 aa17.03■□□□□ 0.32
RPAIN-211ENST00000572174 CCDC8Q9H0W5 538 aaPredicted RBP17.03■□□□□ 0.32
RPAIN-211ENST00000572174 DCTPP1Q9H773 170 aa17.03■□□□□ 0.32
RPAIN-211ENST00000572174 TDRD3Q9H7E2 651 aaKnown RBP17.03■□□□□ 0.32
RPAIN-211ENST00000572174 MKRN1Q9UHC7 482 aaKnown RBP17.03■□□□□ 0.32
RPAIN-211ENST00000572174 DAGLAQ9Y4D2 1042 aa17.03■□□□□ 0.32
RPAIN-211ENST00000572174 GAKO14976 1311 aa17.02■□□□□ 0.32
RPAIN-211ENST00000572174 CDK5RAP2Q96SN8 1893 aa17.02■□□□□ 0.32
RPAIN-211ENST00000572174 PPP1R12BO60237 982 aaPredicted RBP17.02■□□□□ 0.32
RPAIN-211ENST00000572174 HUNKP57058 714 aa17.02■□□□□ 0.32
RPAIN-211ENST00000572174 TTLL12Q14166 644 aaPredicted RBP17.02■□□□□ 0.32
RPAIN-211ENST00000572174 FAM83AQ86UY5 434 aa17.02■□□□□ 0.32
RPAIN-211ENST00000572174 CERS3Q8IU89 383 aa17.02■□□□□ 0.32
RPAIN-211ENST00000572174 JMYQ8N9B5 988 aa17.02■□□□□ 0.32
RPAIN-211ENST00000572174 FAM163AQ96GL9 167 aaPredicted RBP17.02■□□□□ 0.32
RPAIN-211ENST00000572174 RAI14Q9P0K7 980 aa17.02■□□□□ 0.32
RPAIN-211ENST00000572174 MROH7-TTC4A0A0A0MT08 1334 aa17.01■□□□□ 0.31
RPAIN-211ENST00000572174 UNCXA6NJT0 531 aa17.01■□□□□ 0.31
RPAIN-211ENST00000572174 FMR1Q06787 632 aaKnown RBP eCLIP17.01■□□□□ 0.31
RPAIN-211ENST00000572174 GRIK5Q16478 980 aa17.01■□□□□ 0.31
RPAIN-211ENST00000572174 TLR7Q9NYK1 1049 aaKnown RBP17.01■□□□□ 0.31
RPAIN-211ENST00000572174 SUPT16HQ9Y5B9 1047 aaKnown RBP17.01■□□□□ 0.31
RPAIN-211ENST00000572174 LAMB1P07942 1786 aa17■□□□□ 0.31
RPAIN-211ENST00000572174 PLCG2P16885 1265 aa17■□□□□ 0.31
RPAIN-211ENST00000572174 MECOMQ03112 1051 aa17■□□□□ 0.31
RPAIN-211ENST00000572174 RASA3Q14644 834 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms