RNA–Protein interactions for RNA: ENST00000571880.1

RAB40B-205, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,020 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-205ENST00000571880 PA2G4Q9UQ80 394 aaKnown RBP20.75■□□□□ 0.91
RAB40B-205ENST00000571880 TNNQ9UQP3 1299 aa20.75■□□□□ 0.91
RAB40B-205ENST00000571880 PPP1R12BO60237 982 aaPredicted RBP20.74■□□□□ 0.91
RAB40B-205ENST00000571880 IFIT1P09914 478 aaKnown RBP20.74■□□□□ 0.91
RAB40B-205ENST00000571880 FGFR2P21802 821 aa20.74■□□□□ 0.91
RAB40B-205ENST00000571880 SOX10P56693 466 aa20.74■□□□□ 0.91
RAB40B-205ENST00000571880 SREBF2Q12772 1141 aa20.74■□□□□ 0.91
RAB40B-205ENST00000571880 ATG9AQ7Z3C6 839 aa20.74■□□□□ 0.91
RAB40B-205ENST00000571880 REM2Q8IYK8 340 aaPredicted RBP20.74■□□□□ 0.91
RAB40B-205ENST00000571880 ZNF296Q8WUU4 475 aaPredicted RBP20.74■□□□□ 0.91
RAB40B-205ENST00000571880 SLC10A4Q96EP9 437 aa20.74■□□□□ 0.91
RAB40B-205ENST00000571880 SLC5A1P13866 664 aa20.73■□□□□ 0.91
RAB40B-205ENST00000571880 GJA5P36382 358 aa20.73■□□□□ 0.91
RAB40B-205ENST00000571880 SUPT20HL1Q3ZLR7 823 aa20.73■□□□□ 0.91
RAB40B-205ENST00000571880 CTU1Q7Z7A3 348 aaKnown RBP20.73■□□□□ 0.91
RAB40B-205ENST00000571880 API5Q9BZZ5 524 aaKnown RBP20.73■□□□□ 0.91
RAB40B-205ENST00000571880 DOCK2Q92608 1830 aa20.72■□□□□ 0.91
RAB40B-205ENST00000571880 USP2O75604 605 aaPredicted RBP20.72■□□□□ 0.91
RAB40B-205ENST00000571880 TM4SF4P48230 202 aa20.72■□□□□ 0.91
RAB40B-205ENST00000571880 RARSP54136 660 aaKnown RBP20.72■□□□□ 0.91
RAB40B-205ENST00000571880 TNFAIP1Q13829 316 aa20.72■□□□□ 0.91
RAB40B-205ENST00000571880 ELP3Q9H9T3 547 aa20.72■□□□□ 0.91
RAB40B-205ENST00000571880 ZSWIM8A7E2V4 1837 aa20.71■□□□□ 0.91
RAB40B-205ENST00000571880 IREB2P48200 963 aaKnown RBP20.71■□□□□ 0.91
RAB40B-205ENST00000571880 MAP3K11Q16584 847 aa20.71■□□□□ 0.91
RAB40B-205ENST00000571880 TBC1D22AQ8WUA7 517 aa20.71■□□□□ 0.91
RAB40B-205ENST00000571880 CNKSR2Q8WXI2 1034 aa20.71■□□□□ 0.91
RAB40B-205ENST00000571880 TEKT1Q969V4 418 aa20.71■□□□□ 0.91
RAB40B-205ENST00000571880 TEPSINQ96N21 525 aa20.71■□□□□ 0.91
RAB40B-205ENST00000571880 GPR25O00155 361 aa20.7■□□□□ 0.9
RAB40B-205ENST00000571880 IGF2BP3O00425 579 aaKnown RBP eCLIP20.7■□□□□ 0.9
RAB40B-205ENST00000571880 ATP2B3Q16720 1220 aa20.7■□□□□ 0.9
RAB40B-205ENST00000571880 CT47B1P0C2W7 299 aaPredicted RBP20.69■□□□□ 0.9
RAB40B-205ENST00000571880 ADORA1P30542 326 aa20.69■□□□□ 0.9
RAB40B-205ENST00000571880 LPIN2Q92539 896 aa20.69■□□□□ 0.9
RAB40B-205ENST00000571880 KIF16BQ96L93 1317 aa20.69■□□□□ 0.9
RAB40B-205ENST00000571880 MANSC4A6NHS7 340 aaPredicted RBP20.68■□□□□ 0.9
RAB40B-205ENST00000571880 MLLT1Q03111 559 aaPredicted RBP20.68■□□□□ 0.9
RAB40B-205ENST00000571880 IFNL1Q8IU54 200 aa20.68■□□□□ 0.9
RAB40B-205ENST00000571880 FRAT1Q92837 279 aaPredicted RBP20.68■□□□□ 0.9
RAB40B-205ENST00000571880 ZBTB48P10074 688 aaPredicted RBP20.67■□□□□ 0.9
RAB40B-205ENST00000571880 PHKA1P46020 1223 aa20.67■□□□□ 0.9
RAB40B-205ENST00000571880 TNNI2P48788 182 aa20.67■□□□□ 0.9
RAB40B-205ENST00000571880 DIXDC1Q155Q3 683 aa20.67■□□□□ 0.9
RAB40B-205ENST00000571880 ANKRD13AQ8IZ07 590 aa20.67■□□□□ 0.9
RAB40B-205ENST00000571880 OPTNQ96CV9 577 aa20.67■□□□□ 0.9
RAB40B-205ENST00000571880 TMOD2Q9NZR1 351 aa20.67■□□□□ 0.9
RAB40B-205ENST00000571880 BCAR3O75815 825 aa20.66■□□□□ 0.9
RAB40B-205ENST00000571880 PRDX5P30044 214 aa20.66■□□□□ 0.9
RAB40B-205ENST00000571880 VGLL4Q14135 290 aa20.66■□□□□ 0.9
RAB40B-205ENST00000571880 CLUAP1Q96AJ1 413 aa20.66■□□□□ 0.9
RAB40B-205ENST00000571880 ZDHHC15Q96MV8 337 aa20.66■□□□□ 0.9
RAB40B-205ENST00000571880 CEP126Q9P2H0 1117 aa20.66■□□□□ 0.9
RAB40B-205ENST00000571880 HPS5Q9UPZ3 1129 aa20.66■□□□□ 0.9
RAB40B-205ENST00000571880 MAST3O60307 1309 aa20.66■□□□□ 0.9
RAB40B-205ENST00000571880 FKTNO75072 461 aa20.65■□□□□ 0.9
RAB40B-205ENST00000571880 CIAO1O76071 339 aa20.65■□□□□ 0.9
RAB40B-205ENST00000571880 APOBEC3HQ6NTF7 200 aaKnown RBP20.65■□□□□ 0.9
RAB40B-205ENST00000571880 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.65■□□□□ 0.9
RAB40B-205ENST00000571880 TRIM27P14373 513 aa20.64■□□□□ 0.89
RAB40B-205ENST00000571880 HDLBPQ00341 1268 aaKnown RBP20.64■□□□□ 0.89
RAB40B-205ENST00000571880 OTUD5Q96G74 571 aa20.64■□□□□ 0.89
RAB40B-205ENST00000571880 DAGLAQ9Y4D2 1042 aa20.64■□□□□ 0.89
RAB40B-205ENST00000571880 MYO5AQ9Y4I1 1855 aaKnown RBP20.64■□□□□ 0.89
RAB40B-205ENST00000571880 SRGAP3O43295 1099 aa20.63■□□□□ 0.89
RAB40B-205ENST00000571880 IL15P40933 162 aaPredicted RBP20.63■□□□□ 0.89
RAB40B-205ENST00000571880 CRHR2Q13324 411 aa20.63■□□□□ 0.89
RAB40B-205ENST00000571880 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.63■□□□□ 0.89
RAB40B-205ENST00000571880 WDR66Q8TBY9 1149 aa20.63■□□□□ 0.89
RAB40B-205ENST00000571880 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.63■□□□□ 0.89
RAB40B-205ENST00000571880 TNRC18O15417 2968 aaPredicted RBP20.63■□□□□ 0.89
RAB40B-205ENST00000571880 PDE4DIPQ5VU43 2346 aa20.62■□□□□ 0.89
RAB40B-205ENST00000571880 RGS19P49795 217 aa20.62■□□□□ 0.89
RAB40B-205ENST00000571880 TCP10Q12799 353 aa20.62■□□□□ 0.89
RAB40B-205ENST00000571880 INTS3Q68E01 1043 aaKnown RBP20.62■□□□□ 0.89
RAB40B-205ENST00000571880 MIER1Q8N108 512 aa20.62■□□□□ 0.89
RAB40B-205ENST00000571880 WRNIP1Q96S55 665 aa20.62■□□□□ 0.89
RAB40B-205ENST00000571880 PTPN18Q99952 460 aa20.62■□□□□ 0.89
RAB40B-205ENST00000571880 CSADQ9Y600 493 aa20.62■□□□□ 0.89
RAB40B-205ENST00000571880 ALDH1A1P00352 501 aa20.61■□□□□ 0.89
RAB40B-205ENST00000571880 HNRNPUQ00839 825 aaKnown RBP eCLIP20.61■□□□□ 0.89
RAB40B-205ENST00000571880 TFCP2Q12800 502 aa20.61■□□□□ 0.89
RAB40B-205ENST00000571880 MIGA2Q7L4E1 593 aa20.61■□□□□ 0.89
RAB40B-205ENST00000571880 ZKSCAN4Q969J2 545 aaPredicted RBP20.61■□□□□ 0.89
RAB40B-205ENST00000571880 COPRSQ9NQ92 184 aa20.61■□□□□ 0.89
RAB40B-205ENST00000571880 LDHBP07195 334 aaKnown RBP20.6■□□□□ 0.89
RAB40B-205ENST00000571880 MAP3K9P80192 1104 aa20.6■□□□□ 0.89
RAB40B-205ENST00000571880 NFIAQ12857 509 aa20.6■□□□□ 0.89
RAB40B-205ENST00000571880 CCDC102BQ68D86 513 aa20.6■□□□□ 0.89
RAB40B-205ENST00000571880 CDC42EP5Q6NZY7 148 aa20.6■□□□□ 0.89
RAB40B-205ENST00000571880 HHIPL2Q6UWX4 724 aa20.6■□□□□ 0.89
RAB40B-205ENST00000571880 CD99L2Q8TCZ2 262 aa20.6■□□□□ 0.89
RAB40B-205ENST00000571880 BRI3BPQ8WY22 251 aa20.6■□□□□ 0.89
RAB40B-205ENST00000571880 CFHR5Q9BXR6 569 aa20.6■□□□□ 0.89
RAB40B-205ENST00000571880 GNL3LQ9NVN8 582 aaKnown RBP20.6■□□□□ 0.89
RAB40B-205ENST00000571880 FBXO3Q9UK99 471 aa20.6■□□□□ 0.89
RAB40B-205ENST00000571880 SUGT1Q9Y2Z0 365 aa20.6■□□□□ 0.89
RAB40B-205ENST00000571880 TRIM17Q9Y577 477 aa20.6■□□□□ 0.89
RAB40B-205ENST00000571880 SNCAIPQ9Y6H5 919 aa20.6■□□□□ 0.89
RAB40B-205ENST00000571880 RPAP1Q9BWH6 1393 aaPredicted RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms