RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 ZNF157P51786 506 aaPredicted RBP18■□□□□ 0.47
LITAF-208ENST00000571627 MAP2K1Q02750 393 aaPredicted RBP18■□□□□ 0.47
LITAF-208ENST00000571627 PRKG1Q13976 671 aa18■□□□□ 0.47
LITAF-208ENST00000571627 TTLL12Q14166 644 aaPredicted RBP18■□□□□ 0.47
LITAF-208ENST00000571627 COL13A1Q5TAT6 717 aaPredicted RBP18■□□□□ 0.47
LITAF-208ENST00000571627 GOLGA6L2Q8N9W4 650 aaPredicted RBP18■□□□□ 0.47
LITAF-208ENST00000571627 WDR66Q8TBY9 1149 aa18■□□□□ 0.47
LITAF-208ENST00000571627 XAGE2Q96GT9 111 aa18■□□□□ 0.47
LITAF-208ENST00000571627 NEUROD6Q96NK8 337 aa18■□□□□ 0.47
LITAF-208ENST00000571627 ZNF70Q9UC06 446 aaPredicted RBP18■□□□□ 0.47
LITAF-208ENST00000571627 FZD1Q9UP38 647 aa18■□□□□ 0.47
LITAF-208ENST00000571627 AKAP2Q9Y2D5 859 aa18■□□□□ 0.47
LITAF-208ENST00000571627 FAM155AB1AL88 458 aaPredicted RBP17.99■□□□□ 0.47
LITAF-208ENST00000571627 UBE2Q2LH0YL09 131 aa17.99■□□□□ 0.47
LITAF-208ENST00000571627 NF2P35240 595 aa17.99■□□□□ 0.47
LITAF-208ENST00000571627 MAP2K2P36507 400 aa17.99■□□□□ 0.47
LITAF-208ENST00000571627 FKBP1BP68106 108 aa17.99■□□□□ 0.47
LITAF-208ENST00000571627 SPDYE2Q495Y8 402 aa17.99■□□□□ 0.47
LITAF-208ENST00000571627 TEKT1Q969V4 418 aa17.99■□□□□ 0.47
LITAF-208ENST00000571627 COG6Q9Y2V7 657 aa17.99■□□□□ 0.47
LITAF-208ENST00000571627 MYH2Q9UKX2 1941 aa17.98■□□□□ 0.47
LITAF-208ENST00000571627 PRDX5P30044 214 aa17.98■□□□□ 0.47
LITAF-208ENST00000571627 NOGQ13253 232 aa17.98■□□□□ 0.47
LITAF-208ENST00000571627 OS9Q13438 667 aaPredicted RBP17.98■□□□□ 0.47
LITAF-208ENST00000571627 RASGRF1Q13972 1273 aa17.98■□□□□ 0.47
LITAF-208ENST00000571627 MVPQ14764 893 aaKnown RBP17.98■□□□□ 0.47
LITAF-208ENST00000571627 CEP85Q6P2H3 762 aa17.98■□□□□ 0.47
LITAF-208ENST00000571627 DENND2AQ9ULE3 1009 aa17.98■□□□□ 0.47
LITAF-208ENST00000571627 MAST3O60307 1309 aa17.98■□□□□ 0.47
LITAF-208ENST00000571627 TCP10L2B9ZVM9 353 aa17.97■□□□□ 0.47
LITAF-208ENST00000571627 SEMA3EO15041 775 aa17.97■□□□□ 0.47
LITAF-208ENST00000571627 SURF6O75683 361 aaKnown RBP17.97■□□□□ 0.47
LITAF-208ENST00000571627 SLC10A3P09131 477 aa17.97■□□□□ 0.47
LITAF-208ENST00000571627 CACNB3P54284 484 aa17.97■□□□□ 0.47
LITAF-208ENST00000571627 HDLBPQ00341 1268 aaKnown RBP17.97■□□□□ 0.47
LITAF-208ENST00000571627 RASA3Q14644 834 aa17.97■□□□□ 0.47
LITAF-208ENST00000571627 RASAL3Q86YV0 1011 aa17.97■□□□□ 0.47
LITAF-208ENST00000571627 SUGT1Q9Y2Z0 365 aa17.97■□□□□ 0.47
LITAF-208ENST00000571627 PPP2R3BQ9Y5P8 575 aa17.97■□□□□ 0.47
LITAF-208ENST00000571627 OTOFQ9HC10 1997 aa17.97■□□□□ 0.47
LITAF-208ENST00000571627 DIXDC1Q155Q3 683 aa17.96■□□□□ 0.47
LITAF-208ENST00000571627 NBPF12Q5TAG4 269 aaPredicted RBP17.96■□□□□ 0.47
LITAF-208ENST00000571627 C20orf194Q5TEA3 1177 aa17.96■□□□□ 0.47
LITAF-208ENST00000571627 CDAN1Q8IWY9 1227 aa17.96■□□□□ 0.47
LITAF-208ENST00000571627 CCDC102AQ96A19 550 aa17.96■□□□□ 0.47
LITAF-208ENST00000571627 ZDHHC15Q96MV8 337 aa17.96■□□□□ 0.47
LITAF-208ENST00000571627 TSKSQ9UJT2 592 aa17.96■□□□□ 0.47
LITAF-208ENST00000571627 LDHBP07195 334 aaKnown RBP17.95■□□□□ 0.46
LITAF-208ENST00000571627 CTCFP49711 727 aaPredicted RBP17.95■□□□□ 0.46
LITAF-208ENST00000571627 LBX1P52954 281 aa17.95■□□□□ 0.46
LITAF-208ENST00000571627 GORABQ5T7V8 394 aa17.95■□□□□ 0.46
LITAF-208ENST00000571627 APOBEC3HQ6NTF7 200 aaKnown RBP17.95■□□□□ 0.46
LITAF-208ENST00000571627 PI16Q6UXB8 463 aa17.95■□□□□ 0.46
LITAF-208ENST00000571627 BEGAINQ9BUH8 593 aa17.95■□□□□ 0.46
LITAF-208ENST00000571627 ANGEL1Q9UNK9 670 aaKnown RBP17.95■□□□□ 0.46
LITAF-208ENST00000571627 AKAP11Q9UKA4 1901 aa17.95■□□□□ 0.46
LITAF-208ENST00000571627 SALL1Q9NSC2 1324 aa17.95■□□□□ 0.46
LITAF-208ENST00000571627 HSPA8P11142 646 aaKnown RBP17.94■□□□□ 0.46
LITAF-208ENST00000571627 KIF23Q02241 960 aaPredicted RBP17.94■□□□□ 0.46
LITAF-208ENST00000571627 TNFAIP1Q13829 316 aa17.94■□□□□ 0.46
LITAF-208ENST00000571627 TMEM39BQ9GZU3 492 aa17.94■□□□□ 0.46
LITAF-208ENST00000571627 CHMP4BQ9H444 224 aaKnown RBP17.94■□□□□ 0.46
LITAF-208ENST00000571627 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.94■□□□□ 0.46
LITAF-208ENST00000571627 DDX19BQ9UMR2 479 aa17.94■□□□□ 0.46
LITAF-208ENST00000571627 NOP58Q9Y2X3 529 aaKnown RBP17.94■□□□□ 0.46
LITAF-208ENST00000571627 DAGLAQ9Y4D2 1042 aa17.94■□□□□ 0.46
LITAF-208ENST00000571627 PDE3AQ14432 1141 aa17.93■□□□□ 0.46
LITAF-208ENST00000571627 TNNI3KQ59H18 835 aa17.93■□□□□ 0.46
LITAF-208ENST00000571627 HHIPL2Q6UWX4 724 aa17.93■□□□□ 0.46
LITAF-208ENST00000571627 ARMC9Q7Z3E5 817 aa17.93■□□□□ 0.46
LITAF-208ENST00000571627 MRIQ9BWK5 157 aa17.93■□□□□ 0.46
LITAF-208ENST00000571627 EXOC6BQ9Y2D4 811 aa17.93■□□□□ 0.46
LITAF-208ENST00000571627 FPGT-TNNI3KV9GXZ4 949 aa17.93■□□□□ 0.46
LITAF-208ENST00000571627 PDS5AQ29RF7 1337 aaKnown RBP17.93■□□□□ 0.46
LITAF-208ENST00000571627 MYO5AQ9Y4I1 1855 aaKnown RBP17.92■□□□□ 0.46
LITAF-208ENST00000571627 ZBTB22O15209 634 aa17.92■□□□□ 0.46
LITAF-208ENST00000571627 MKRN3Q13064 507 aaKnown RBP17.92■□□□□ 0.46
LITAF-208ENST00000571627 SUPT20HL1Q3ZLR7 823 aa17.92■□□□□ 0.46
LITAF-208ENST00000571627 TEPSINQ96N21 525 aa17.92■□□□□ 0.46
LITAF-208ENST00000571627 DBNDD2Q9BQY9 259 aa17.92■□□□□ 0.46
LITAF-208ENST00000571627 ZBTB40Q9NUA8 1239 aa17.92■□□□□ 0.46
LITAF-208ENST00000571627 HMG20BQ9P0W2 317 aa17.92■□□□□ 0.46
LITAF-208ENST00000571627 ABCF2Q9UG63 623 aa17.92■□□□□ 0.46
LITAF-208ENST00000571627 AK9Q5TCS8 1911 aa17.92■□□□□ 0.46
LITAF-208ENST00000571627 ARID4AP29374 1257 aaPredicted RBP17.91■□□□□ 0.46
LITAF-208ENST00000571627 TNNI2P48788 182 aa17.91■□□□□ 0.46
LITAF-208ENST00000571627 LDLRAD1Q5T700 205 aa17.91■□□□□ 0.46
LITAF-208ENST00000571627 ZGPATQ8N5A5 531 aaKnown RBP17.91■□□□□ 0.46
LITAF-208ENST00000571627 SPATA5Q8NB90 893 aa17.91■□□□□ 0.46
LITAF-208ENST00000571627 CLMNQ96JQ2 1002 aa17.91■□□□□ 0.46
LITAF-208ENST00000571627 GPR108Q9NPR9 543 aa17.91■□□□□ 0.46
LITAF-208ENST00000571627 TMOD2Q9NZR1 351 aa17.91■□□□□ 0.46
LITAF-208ENST00000571627 PPP1R12BO60237 982 aaPredicted RBP17.9■□□□□ 0.46
LITAF-208ENST00000571627 MCAMP43121 646 aa17.9■□□□□ 0.46
LITAF-208ENST00000571627 DZIP1Q86YF9 867 aaKnown RBP17.9■□□□□ 0.46
LITAF-208ENST00000571627 SIRT2Q8IXJ6 389 aa17.9■□□□□ 0.46
LITAF-208ENST00000571627 PRDM10Q9NQV6 1147 aa17.9■□□□□ 0.46
LITAF-208ENST00000571627 TLR7Q9NYK1 1049 aaKnown RBP17.9■□□□□ 0.46
LITAF-208ENST00000571627 CASP8AP2Q9UKL3 1982 aa17.9■□□□□ 0.46
LITAF-208ENST00000571627 USP2O75604 605 aaPredicted RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms