RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 ATF7IPQ6VMQ6 1270 aa17.14■□□□□ 0.33
RAB40B-204ENST00000571554 CDAN1Q8IWY9 1227 aa17.14■□□□□ 0.33
RAB40B-204ENST00000571554 LPIN2Q92539 896 aa17.14■□□□□ 0.33
RAB40B-204ENST00000571554 ABHD8Q96I13 439 aa17.14■□□□□ 0.33
RAB40B-204ENST00000571554 CEP126Q9P2H0 1117 aa17.14■□□□□ 0.33
RAB40B-204ENST00000571554 IPO8O15397 1037 aaKnown RBP17.13■□□□□ 0.33
RAB40B-204ENST00000571554 CIAO1O76071 339 aa17.13■□□□□ 0.33
RAB40B-204ENST00000571554 CACNB3P54284 484 aa17.13■□□□□ 0.33
RAB40B-204ENST00000571554 SPDYE2Q495Y8 402 aa17.13■□□□□ 0.33
RAB40B-204ENST00000571554 TBC1D22AQ8WUA7 517 aa17.13■□□□□ 0.33
RAB40B-204ENST00000571554 CLMNQ96JQ2 1002 aa17.13■□□□□ 0.33
RAB40B-204ENST00000571554 SRGAP3O43295 1099 aa17.12■□□□□ 0.33
RAB40B-204ENST00000571554 GNAI3P08754 354 aa17.12■□□□□ 0.33
RAB40B-204ENST00000571554 ADORA1P30542 326 aa17.12■□□□□ 0.33
RAB40B-204ENST00000571554 SAGE1Q9NXZ1 904 aa17.12■□□□□ 0.33
RAB40B-204ENST00000571554 PPP2R3BQ9Y5P8 575 aa17.12■□□□□ 0.33
RAB40B-204ENST00000571554 IL15P40933 162 aaPredicted RBP17.11■□□□□ 0.33
RAB40B-204ENST00000571554 LDLRAD1Q5T700 205 aa17.11■□□□□ 0.33
RAB40B-204ENST00000571554 TMEM57Q8N5G2 664 aa17.11■□□□□ 0.33
RAB40B-204ENST00000571554 TEKT1Q969V4 418 aa17.11■□□□□ 0.33
RAB40B-204ENST00000571554 TMEM39BQ9GZU3 492 aa17.11■□□□□ 0.33
RAB40B-204ENST00000571554 COPRSQ9NQ92 184 aa17.11■□□□□ 0.33
RAB40B-204ENST00000571554 HDAC5Q9UQL6 1122 aa17.11■□□□□ 0.33
RAB40B-204ENST00000571554 OTOFQ9HC10 1997 aa17.11■□□□□ 0.33
RAB40B-204ENST00000571554 PPP1R12BO60237 982 aaPredicted RBP17.1■□□□□ 0.33
RAB40B-204ENST00000571554 PHKA1P46020 1223 aa17.1■□□□□ 0.33
RAB40B-204ENST00000571554 DGKZQ13574 1117 aa17.1■□□□□ 0.33
RAB40B-204ENST00000571554 SUPT20HL1Q3ZLR7 823 aa17.1■□□□□ 0.33
RAB40B-204ENST00000571554 MCOLN1Q9GZU1 580 aa17.1■□□□□ 0.33
RAB40B-204ENST00000571554 FBXO3Q9UK99 471 aa17.1■□□□□ 0.33
RAB40B-204ENST00000571554 TBC1D8O95759 1140 aa17.09■□□□□ 0.33
RAB40B-204ENST00000571554 TNFAIP1Q13829 316 aa17.09■□□□□ 0.33
RAB40B-204ENST00000571554 SPRYD7Q5W111 196 aa17.09■□□□□ 0.33
RAB40B-204ENST00000571554 ZKSCAN2Q63HK3 967 aa17.09■□□□□ 0.33
RAB40B-204ENST00000571554 SLC10A4Q96EP9 437 aa17.09■□□□□ 0.33
RAB40B-204ENST00000571554 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.09■□□□□ 0.33
RAB40B-204ENST00000571554 CCDC85CA6NKD9 419 aa17.08■□□□□ 0.32
RAB40B-204ENST00000571554 USP2O75604 605 aaPredicted RBP17.08■□□□□ 0.32
RAB40B-204ENST00000571554 GNAI2P04899 355 aa17.08■□□□□ 0.32
RAB40B-204ENST00000571554 TIMM10P62072 90 aa17.08■□□□□ 0.32
RAB40B-204ENST00000571554 TFCP2Q12800 502 aa17.08■□□□□ 0.32
RAB40B-204ENST00000571554 DIXDC1Q155Q3 683 aa17.08■□□□□ 0.32
RAB40B-204ENST00000571554 MAP3K11Q16584 847 aa17.08■□□□□ 0.32
RAB40B-204ENST00000571554 WDR66Q8TBY9 1149 aa17.08■□□□□ 0.32
RAB40B-204ENST00000571554 TEPSINQ96N21 525 aa17.08■□□□□ 0.32
RAB40B-204ENST00000571554 MAST3O60307 1309 aa17.07■□□□□ 0.32
RAB40B-204ENST00000571554 PNMA6EA0A0J9YXQ4 647 aa17.07■□□□□ 0.32
RAB40B-204ENST00000571554 PRDX5P30044 214 aa17.07■□□□□ 0.32
RAB40B-204ENST00000571554 IREB2P48200 963 aaKnown RBP17.07■□□□□ 0.32
RAB40B-204ENST00000571554 TNNI2P48788 182 aa17.07■□□□□ 0.32
RAB40B-204ENST00000571554 HDLBPQ00341 1268 aaKnown RBP17.07■□□□□ 0.32
RAB40B-204ENST00000571554 APOBEC3HQ6NTF7 200 aaKnown RBP17.07■□□□□ 0.32
RAB40B-204ENST00000571554 REM2Q8IYK8 340 aaPredicted RBP17.07■□□□□ 0.32
RAB40B-204ENST00000571554 WNK4Q96J92 1243 aa17.07■□□□□ 0.32
RAB40B-204ENST00000571554 ZDHHC15Q96MV8 337 aa17.07■□□□□ 0.32
RAB40B-204ENST00000571554 C1orf115Q9H7X2 142 aa17.07■□□□□ 0.32
RAB40B-204ENST00000571554 A0A1B0GUL7 405 aa17.06■□□□□ 0.32
RAB40B-204ENST00000571554 GJA5P36382 358 aa17.06■□□□□ 0.32
RAB40B-204ENST00000571554 TM4SF4P48230 202 aa17.06■□□□□ 0.32
RAB40B-204ENST00000571554 MTX1Q13505 466 aa17.06■□□□□ 0.32
RAB40B-204ENST00000571554 CCDC102BQ68D86 513 aa17.06■□□□□ 0.32
RAB40B-204ENST00000571554 ELP3Q9H9T3 547 aa17.06■□□□□ 0.32
RAB40B-204ENST00000571554 GNL3LQ9NVN8 582 aaKnown RBP17.06■□□□□ 0.32
RAB40B-204ENST00000571554 TMOD2Q9NZR1 351 aa17.06■□□□□ 0.32
RAB40B-204ENST00000571554 RLBP1P12271 317 aa17.05■□□□□ 0.32
RAB40B-204ENST00000571554 SREBF2Q12772 1141 aa17.05■□□□□ 0.32
RAB40B-204ENST00000571554 FTSJ3Q8IY81 847 aaKnown RBP17.05■□□□□ 0.32
RAB40B-204ENST00000571554 R3HDMLQ9H3Y0 253 aa17.05■□□□□ 0.32
RAB40B-204ENST00000571554 SUGT1Q9Y2Z0 365 aa17.05■□□□□ 0.32
RAB40B-204ENST00000571554 ZBED9Q6R2W3 1325 aa17.04■□□□□ 0.32
RAB40B-204ENST00000571554 LDHBP07195 334 aaKnown RBP17.04■□□□□ 0.32
RAB40B-204ENST00000571554 RASGRF1Q13972 1273 aa17.04■□□□□ 0.32
RAB40B-204ENST00000571554 HHIPL2Q6UWX4 724 aa17.04■□□□□ 0.32
RAB40B-204ENST00000571554 ITPRIPQ8IWB1 547 aa17.04■□□□□ 0.32
RAB40B-204ENST00000571554 ANKRD13AQ8IZ07 590 aa17.04■□□□□ 0.32
RAB40B-204ENST00000571554 CNKSR2Q8WXI2 1034 aa17.04■□□□□ 0.32
RAB40B-204ENST00000571554 XAGE2Q96GT9 111 aa17.04■□□□□ 0.32
RAB40B-204ENST00000571554 NEUROD6Q96NK8 337 aa17.04■□□□□ 0.32
RAB40B-204ENST00000571554 DENND2AQ9ULE3 1009 aa17.04■□□□□ 0.32
RAB40B-204ENST00000571554 DAGLAQ9Y4D2 1042 aa17.04■□□□□ 0.32
RAB40B-204ENST00000571554 MYH2Q9UKX2 1941 aa17.02■□□□□ 0.32
RAB40B-204ENST00000571554 ZBTB48P10074 688 aaPredicted RBP17.02■□□□□ 0.32
RAB40B-204ENST00000571554 TCP10Q12799 353 aa17.02■□□□□ 0.32
RAB40B-204ENST00000571554 VGLL4Q14135 290 aa17.02■□□□□ 0.32
RAB40B-204ENST00000571554 CDC42EP5Q6NZY7 148 aa17.02■□□□□ 0.32
RAB40B-204ENST00000571554 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.02■□□□□ 0.32
RAB40B-204ENST00000571554 ZNF296Q8WUU4 475 aaPredicted RBP17.02■□□□□ 0.32
RAB40B-204ENST00000571554 OPTNQ96CV9 577 aa17.02■□□□□ 0.32
RAB40B-204ENST00000571554 MRIQ9BWK5 157 aa17.02■□□□□ 0.32
RAB40B-204ENST00000571554 ABCF2Q9UG63 623 aa17.02■□□□□ 0.32
RAB40B-204ENST00000571554 AK9Q5TCS8 1911 aa17.02■□□□□ 0.31
RAB40B-204ENST00000571554 MANSC4A6NHS7 340 aaPredicted RBP17.01■□□□□ 0.31
RAB40B-204ENST00000571554 IGF2BP3O00425 579 aaKnown RBP eCLIP17.01■□□□□ 0.31
RAB40B-204ENST00000571554 SEMA3EO15041 775 aa17.01■□□□□ 0.31
RAB40B-204ENST00000571554 NFIAQ12857 509 aa17.01■□□□□ 0.31
RAB40B-204ENST00000571554 G3BP1Q13283 466 aaKnown RBP eCLIP17.01■□□□□ 0.31
RAB40B-204ENST00000571554 PI16Q6UXB8 463 aa17.01■□□□□ 0.31
RAB40B-204ENST00000571554 IFNL1Q8IU54 200 aa17.01■□□□□ 0.31
RAB40B-204ENST00000571554 AKAP2Q9Y2D5 859 aa17.01■□□□□ 0.31
RAB40B-204ENST00000571554 LAMB1P07942 1786 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms