RNA–Protein interactions for RNA: ENST00000571346.1

PRPF8-202, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-202ENST00000571346 SPDYE2Q495Y8 402 aa16.99■□□□□ 0.31
PRPF8-202ENST00000571346 INTS3Q68E01 1043 aaKnown RBP16.99■□□□□ 0.31
PRPF8-202ENST00000571346 ATF7IPQ6VMQ6 1270 aa16.99■□□□□ 0.31
PRPF8-202ENST00000571346 CSRNP1Q96S65 589 aa16.99■□□□□ 0.31
PRPF8-202ENST00000571346 RNF186Q9NXI6 227 aa16.99■□□□□ 0.31
PRPF8-202ENST00000571346 OTOFQ9HC10 1997 aa16.98■□□□□ 0.31
PRPF8-202ENST00000571346 SRGAP3O43295 1099 aa16.98■□□□□ 0.31
PRPF8-202ENST00000571346 PPP1R12BO60237 982 aaPredicted RBP16.98■□□□□ 0.31
PRPF8-202ENST00000571346 RASA3Q14644 834 aa16.98■□□□□ 0.31
PRPF8-202ENST00000571346 DZIP1LQ8IYY4 767 aaKnown RBP16.98■□□□□ 0.31
PRPF8-202ENST00000571346 TEKT1Q969V4 418 aa16.98■□□□□ 0.31
PRPF8-202ENST00000571346 ABHD8Q96I13 439 aa16.98■□□□□ 0.31
PRPF8-202ENST00000571346 TDRD3Q9H7E2 651 aaKnown RBP16.98■□□□□ 0.31
PRPF8-202ENST00000571346 CEP126Q9P2H0 1117 aa16.98■□□□□ 0.31
PRPF8-202ENST00000571346 ZNF70Q9UC06 446 aaPredicted RBP16.98■□□□□ 0.31
PRPF8-202ENST00000571346 MAST3O60307 1309 aa16.97■□□□□ 0.31
PRPF8-202ENST00000571346 TCP10L2B9ZVM9 353 aa16.97■□□□□ 0.31
PRPF8-202ENST00000571346 IL15P40933 162 aaPredicted RBP16.97■□□□□ 0.31
PRPF8-202ENST00000571346 SUPT20HL1Q3ZLR7 823 aa16.97■□□□□ 0.31
PRPF8-202ENST00000571346 REM2Q8IYK8 340 aaPredicted RBP16.97■□□□□ 0.31
PRPF8-202ENST00000571346 FBXO3Q9UK99 471 aa16.97■□□□□ 0.31
PRPF8-202ENST00000571346 NBPF12Q5TAG4 269 aaPredicted RBP16.96■□□□□ 0.31
PRPF8-202ENST00000571346 IREB2P48200 963 aaKnown RBP16.95■□□□□ 0.3
PRPF8-202ENST00000571346 TNNI2P48788 182 aa16.95■□□□□ 0.3
PRPF8-202ENST00000571346 CACNB3P54284 484 aa16.95■□□□□ 0.3
PRPF8-202ENST00000571346 SREBF2Q12772 1141 aa16.95■□□□□ 0.3
PRPF8-202ENST00000571346 ZKSCAN2Q63HK3 967 aa16.95■□□□□ 0.3
PRPF8-202ENST00000571346 CDAN1Q8IWY9 1227 aa16.95■□□□□ 0.3
PRPF8-202ENST00000571346 CLMNQ96JQ2 1002 aa16.95■□□□□ 0.3
PRPF8-202ENST00000571346 COPRSQ9NQ92 184 aa16.95■□□□□ 0.3
PRPF8-202ENST00000571346 GNL3LQ9NVN8 582 aaKnown RBP16.95■□□□□ 0.3
PRPF8-202ENST00000571346 TMOD2Q9NZR1 351 aa16.95■□□□□ 0.3
PRPF8-202ENST00000571346 GNAI2P04899 355 aa16.94■□□□□ 0.3
PRPF8-202ENST00000571346 ADORA1P30542 326 aa16.94■□□□□ 0.3
PRPF8-202ENST00000571346 DGKZQ13574 1117 aa16.94■□□□□ 0.3
PRPF8-202ENST00000571346 LDLRAD1Q5T700 205 aa16.94■□□□□ 0.3
PRPF8-202ENST00000571346 FTSJ3Q8IY81 847 aaKnown RBP16.94■□□□□ 0.3
PRPF8-202ENST00000571346 TMEM57Q8N5G2 664 aa16.94■□□□□ 0.3
PRPF8-202ENST00000571346 WDR66Q8TBY9 1149 aa16.94■□□□□ 0.3
PRPF8-202ENST00000571346 MCOLN1Q9GZU1 580 aa16.94■□□□□ 0.3
PRPF8-202ENST00000571346 TMEM39BQ9GZU3 492 aa16.94■□□□□ 0.3
PRPF8-202ENST00000571346 ZBED9Q6R2W3 1325 aa16.94■□□□□ 0.3
PRPF8-202ENST00000571346 PHKA1P46020 1223 aa16.93■□□□□ 0.3
PRPF8-202ENST00000571346 HDLBPQ00341 1268 aaKnown RBP16.93■□□□□ 0.3
PRPF8-202ENST00000571346 SPRYD7Q5W111 196 aa16.93■□□□□ 0.3
PRPF8-202ENST00000571346 SLC10A4Q96EP9 437 aa16.93■□□□□ 0.3
PRPF8-202ENST00000571346 SUGT1Q9Y2Z0 365 aa16.93■□□□□ 0.3
PRPF8-202ENST00000571346 CCDC85CA6NKD9 419 aa16.92■□□□□ 0.3
PRPF8-202ENST00000571346 MAP3K11Q16584 847 aa16.92■□□□□ 0.3
PRPF8-202ENST00000571346 WNK4Q96J92 1243 aa16.92■□□□□ 0.3
PRPF8-202ENST00000571346 ZDHHC15Q96MV8 337 aa16.92■□□□□ 0.3
PRPF8-202ENST00000571346 PRDX5P30044 214 aa16.91■□□□□ 0.3
PRPF8-202ENST00000571346 TFCP2Q12800 502 aa16.91■□□□□ 0.3
PRPF8-202ENST00000571346 MTX1Q13505 466 aa16.91■□□□□ 0.3
PRPF8-202ENST00000571346 DIXDC1Q155Q3 683 aa16.91■□□□□ 0.3
PRPF8-202ENST00000571346 DENND2AQ9ULE3 1009 aa16.91■□□□□ 0.3
PRPF8-202ENST00000571346 LAMB1P07942 1786 aa16.91■□□□□ 0.3
PRPF8-202ENST00000571346 A0A1B0GUL7 405 aa16.9■□□□□ 0.3
PRPF8-202ENST00000571346 TBC1D8O95759 1140 aa16.9■□□□□ 0.3
PRPF8-202ENST00000571346 LDHBP07195 334 aaKnown RBP16.9■□□□□ 0.3
PRPF8-202ENST00000571346 ZBTB48P10074 688 aaPredicted RBP16.9■□□□□ 0.3
PRPF8-202ENST00000571346 CCDC102BQ68D86 513 aa16.9■□□□□ 0.3
PRPF8-202ENST00000571346 APOBEC3HQ6NTF7 200 aaKnown RBP16.9■□□□□ 0.3
PRPF8-202ENST00000571346 ITPRIPQ8IWB1 547 aa16.9■□□□□ 0.3
PRPF8-202ENST00000571346 ANKRD13AQ8IZ07 590 aa16.9■□□□□ 0.3
PRPF8-202ENST00000571346 TEPSINQ96N21 525 aa16.9■□□□□ 0.3
PRPF8-202ENST00000571346 ELP3Q9H9T3 547 aa16.9■□□□□ 0.3
PRPF8-202ENST00000571346 PNMA6EA0A0J9YXQ4 647 aa16.89■□□□□ 0.29
PRPF8-202ENST00000571346 SEMA3EO15041 775 aa16.89■□□□□ 0.29
PRPF8-202ENST00000571346 USP2O75604 605 aaPredicted RBP16.89■□□□□ 0.29
PRPF8-202ENST00000571346 HHIPL2Q6UWX4 724 aa16.89■□□□□ 0.29
PRPF8-202ENST00000571346 C1orf115Q9H7X2 142 aa16.89■□□□□ 0.29
PRPF8-202ENST00000571346 AKAP2Q9Y2D5 859 aa16.89■□□□□ 0.29
PRPF8-202ENST00000571346 DAGLAQ9Y4D2 1042 aa16.89■□□□□ 0.29
PRPF8-202ENST00000571346 MANSC4A6NHS7 340 aaPredicted RBP16.88■□□□□ 0.29
PRPF8-202ENST00000571346 TM4SF4P48230 202 aa16.88■□□□□ 0.29
PRPF8-202ENST00000571346 TIMM10P62072 90 aa16.88■□□□□ 0.29
PRPF8-202ENST00000571346 RASGRF1Q13972 1273 aa16.88■□□□□ 0.29
PRPF8-202ENST00000571346 MVPQ14764 893 aaKnown RBP16.88■□□□□ 0.29
PRPF8-202ENST00000571346 DZIP1Q86YF9 867 aaKnown RBP16.88■□□□□ 0.29
PRPF8-202ENST00000571346 XAGE2Q96GT9 111 aa16.88■□□□□ 0.29
PRPF8-202ENST00000571346 NEUROD6Q96NK8 337 aa16.88■□□□□ 0.29
PRPF8-202ENST00000571346 RPAP1Q9BWH6 1393 aaPredicted RBP16.88■□□□□ 0.29
PRPF8-202ENST00000571346 UNCXA6NJT0 531 aa16.87■□□□□ 0.29
PRPF8-202ENST00000571346 G3BP1Q13283 466 aaKnown RBP eCLIP16.87■□□□□ 0.296e-8■□□□□ 10.5
PRPF8-202ENST00000571346 OS9Q13438 667 aaPredicted RBP16.87■□□□□ 0.29
PRPF8-202ENST00000571346 VGLL4Q14135 290 aa16.87■□□□□ 0.29
PRPF8-202ENST00000571346 GORABQ5T7V8 394 aa16.87■□□□□ 0.29
PRPF8-202ENST00000571346 ZGPATQ8N5A5 531 aaKnown RBP16.87■□□□□ 0.29
PRPF8-202ENST00000571346 OPTNQ96CV9 577 aa16.87■□□□□ 0.29
PRPF8-202ENST00000571346 ABCF2Q9UG63 623 aa16.87■□□□□ 0.29
PRPF8-202ENST00000571346 CSADQ9Y600 493 aa16.87■□□□□ 0.29
PRPF8-202ENST00000571346 SALL1Q9NSC2 1324 aa16.87■□□□□ 0.29
PRPF8-202ENST00000571346 MYH2Q9UKX2 1941 aa16.86■□□□□ 0.29
PRPF8-202ENST00000571346 GJA5P36382 358 aa16.86■□□□□ 0.29
PRPF8-202ENST00000571346 CTU1Q7Z7A3 348 aaKnown RBP16.86■□□□□ 0.29
PRPF8-202ENST00000571346 FAM83AQ86UY5 434 aa16.86■□□□□ 0.29
PRPF8-202ENST00000571346 ZNF296Q8WUU4 475 aaPredicted RBP16.86■□□□□ 0.29
PRPF8-202ENST00000571346 MRIQ9BWK5 157 aa16.86■□□□□ 0.29
PRPF8-202ENST00000571346 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms