RNA–Protein interactions for RNA: ENST00000571186.5

CIITA-205, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 1,041 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-205ENST00000571186 TESPA1A2RU30 521 aaPredicted RBP18.09■□□□□ 0.49
CIITA-205ENST00000571186 TCP10L2B9ZVM9 353 aa18.09■□□□□ 0.49
CIITA-205ENST00000571186 SLC4A10Q6U841 1118 aa18.09■□□□□ 0.49
CIITA-205ENST00000571186 DZIP1LQ8IYY4 767 aaKnown RBP18.09■□□□□ 0.49
CIITA-205ENST00000571186 SERPINA10Q9UK55 444 aa18.09■□□□□ 0.49
CIITA-205ENST00000571186 FAM84BQ96KN1 310 aaPredicted RBP18.08■□□□□ 0.48
CIITA-205ENST00000571186 RBBP6Q7Z6E9 1792 aaKnown RBP18.08■□□□□ 0.48
CIITA-205ENST00000571186 ZNF521Q96K83 1311 aa18.07■□□□□ 0.48
CIITA-205ENST00000571186 EN2P19622 333 aaPredicted RBP18.07■□□□□ 0.48
CIITA-205ENST00000571186 CRKP46108 304 aa18.07■□□□□ 0.48
CIITA-205ENST00000571186 TNNI2P48788 182 aa18.07■□□□□ 0.48
CIITA-205ENST00000571186 CDAN1Q8IWY9 1227 aa18.07■□□□□ 0.48
CIITA-205ENST00000571186 CNKSR2Q8WXI2 1034 aa18.07■□□□□ 0.48
CIITA-205ENST00000571186 MS4A4AQ96JQ5 239 aa18.07■□□□□ 0.48
CIITA-205ENST00000571186 PUS3Q9BZE2 481 aaKnown RBP18.07■□□□□ 0.48
CIITA-205ENST00000571186 TMEM39BQ9GZU3 492 aa18.07■□□□□ 0.48
CIITA-205ENST00000571186 BRCA2P51587 3418 aa18.07■□□□□ 0.48
CIITA-205ENST00000571186 MAP3K9P80192 1104 aa18.06■□□□□ 0.48
CIITA-205ENST00000571186 CAP1Q01518 475 aa18.06■□□□□ 0.48
CIITA-205ENST00000571186 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.06■□□□□ 0.48
CIITA-205ENST00000571186 VPS37DQ86XT2 251 aa18.06■□□□□ 0.48
CIITA-205ENST00000571186 ARMC5Q96C12 935 aa18.06■□□□□ 0.48
CIITA-205ENST00000571186 TEPSINQ96N21 525 aa18.06■□□□□ 0.48
CIITA-205ENST00000571186 SRCIN1Q9C0H9 1055 aa18.06■□□□□ 0.48
CIITA-205ENST00000571186 IQSEC3Q9UPP2 1182 aaPredicted RBP18.06■□□□□ 0.48
CIITA-205ENST00000571186 CSADQ9Y600 493 aa18.06■□□□□ 0.48
CIITA-205ENST00000571186 AK9Q5TCS8 1911 aa18.06■□□□□ 0.48
CIITA-205ENST00000571186 CCL15-CCL14A0A0B4J2E2 113 aa18.05■□□□□ 0.48
CIITA-205ENST00000571186 FRAT2O75474 233 aaPredicted RBP18.05■□□□□ 0.48
CIITA-205ENST00000571186 ALDH1L1O75891 902 aa18.05■□□□□ 0.48
CIITA-205ENST00000571186 GTF2A2P52657 109 aa18.05■□□□□ 0.48
CIITA-205ENST00000571186 CHAF1AQ13111 956 aaPredicted RBP18.05■□□□□ 0.48
CIITA-205ENST00000571186 ARHGEF6Q15052 776 aa18.05■□□□□ 0.48
CIITA-205ENST00000571186 TAF1CQ15572 869 aaPredicted RBP18.05■□□□□ 0.48
CIITA-205ENST00000571186 CCL15Q16663 113 aa18.05■□□□□ 0.48
CIITA-205ENST00000571186 BRI3BPQ8WY22 251 aa18.05■□□□□ 0.48
CIITA-205ENST00000571186 SUCLG2Q96I99 432 aa18.05■□□□□ 0.48
CIITA-205ENST00000571186 TMEM106CQ9BVX2 250 aa18.05■□□□□ 0.48
CIITA-205ENST00000571186 ZFYVE28Q9HCC9 887 aa18.05■□□□□ 0.48
CIITA-205ENST00000571186 ARAP2Q8WZ64 1704 aa18.05■□□□□ 0.48
CIITA-205ENST00000571186 CEP290O15078 2479 aa18.05■□□□□ 0.48
CIITA-205ENST00000571186 VGLL4Q14135 290 aa18.04■□□□□ 0.48
CIITA-205ENST00000571186 HABP4Q5JVS0 413 aaKnown RBP18.04■□□□□ 0.48
CIITA-205ENST00000571186 OTUD5Q96G74 571 aa18.04■□□□□ 0.48
CIITA-205ENST00000571186 RIPOR2Q9Y4F9 1068 aa18.04■□□□□ 0.48
CIITA-205ENST00000571186 GRIK5Q16478 980 aa18.03■□□□□ 0.48
CIITA-205ENST00000571186 NBPF11Q86T75 865 aa18.03■□□□□ 0.48
CIITA-205ENST00000571186 MROH5Q6ZUA9 1318 aa18.02■□□□□ 0.48
CIITA-205ENST00000571186 SLC9C1Q4G0N8 1177 aa18.02■□□□□ 0.48
CIITA-205ENST00000571186 CAVIN4Q5BKX8 364 aa18.02■□□□□ 0.48
CIITA-205ENST00000571186 FBXO33Q7Z6M2 555 aa18.02■□□□□ 0.48
CIITA-205ENST00000571186 FAM43AQ8N2R8 423 aa18.02■□□□□ 0.48
CIITA-205ENST00000571186 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.02■□□□□ 0.48
CIITA-205ENST00000571186 KAZALD1Q96I82 304 aa18.02■□□□□ 0.48
CIITA-205ENST00000571186 WDHD1O75717 1129 aaPredicted RBP18.01■□□□□ 0.47
CIITA-205ENST00000571186 NBPF7P0C2Y1 421 aaPredicted RBP18.01■□□□□ 0.47
CIITA-205ENST00000571186 CACNB3P54284 484 aa18.01■□□□□ 0.47
CIITA-205ENST00000571186 SLC4A8Q2Y0W8 1093 aa18.01■□□□□ 0.47
CIITA-205ENST00000571186 METTL24Q5JXM2 366 aa18.01■□□□□ 0.47
CIITA-205ENST00000571186 TBC1D22AQ8WUA7 517 aa18.01■□□□□ 0.47
CIITA-205ENST00000571186 TEKT1Q969V4 418 aa18.01■□□□□ 0.47
CIITA-205ENST00000571186 PTCH2Q9Y6C5 1203 aa18.01■□□□□ 0.47
CIITA-205ENST00000571186 MYCP01106 439 aaPredicted RBP18■□□□□ 0.47
CIITA-205ENST00000571186 HDLBPQ00341 1268 aaKnown RBP18■□□□□ 0.47
CIITA-205ENST00000571186 LRRC24Q50LG9 513 aa18■□□□□ 0.47
CIITA-205ENST00000571186 CDCA7LQ96GN5 454 aa18■□□□□ 0.47
CIITA-205ENST00000571186 ZNF333Q96JL9 665 aa18■□□□□ 0.47
CIITA-205ENST00000571186 BICC1Q9H694 974 aaKnown RBP18■□□□□ 0.47
CIITA-205ENST00000571186 TMOD2Q9NZR1 351 aa18■□□□□ 0.47
CIITA-205ENST00000571186 CETPP11597 493 aa17.99■□□□□ 0.47
CIITA-205ENST00000571186 KIF22Q14807 665 aa17.99■□□□□ 0.47
CIITA-205ENST00000571186 ERO1BQ86YB8 467 aa17.99■□□□□ 0.47
CIITA-205ENST00000571186 WRNIP1Q96S55 665 aa17.99■□□□□ 0.47
CIITA-205ENST00000571186 MYH13Q9UKX3 1938 aa17.99■□□□□ 0.47
CIITA-205ENST00000571186 ZSWIM8A7E2V4 1837 aa17.98■□□□□ 0.47
CIITA-205ENST00000571186 SPDYE5A6NIY4 337 aa17.98■□□□□ 0.47
CIITA-205ENST00000571186 BCAMP50895 628 aa17.98■□□□□ 0.47
CIITA-205ENST00000571186 ZKSCAN4Q969J2 545 aaPredicted RBP17.98■□□□□ 0.47
CIITA-205ENST00000571186 BTBD19C9JJ37 291 aa17.97■□□□□ 0.47
CIITA-205ENST00000571186 PDE8BO95263 885 aa17.97■□□□□ 0.47
CIITA-205ENST00000571186 SLFN5Q08AF3 891 aa17.97■□□□□ 0.47
CIITA-205ENST00000571186 FAM83AQ86UY5 434 aa17.97■□□□□ 0.47
CIITA-205ENST00000571186 HOOK2Q96ED9 719 aa17.97■□□□□ 0.47
CIITA-205ENST00000571186 ZDHHC15Q96MV8 337 aa17.97■□□□□ 0.47
CIITA-205ENST00000571186 SNCAIPQ9Y6H5 919 aa17.97■□□□□ 0.47
CIITA-205ENST00000571186 UTYO14607 1347 aa17.97■□□□□ 0.47
CIITA-205ENST00000571186 IRF6O14896 467 aa17.96■□□□□ 0.47
CIITA-205ENST00000571186 TLR2O60603 784 aa17.96■□□□□ 0.47
CIITA-205ENST00000571186 ECM2O94769 699 aaPredicted RBP17.96■□□□□ 0.47
CIITA-205ENST00000571186 SNAPC2Q13487 334 aa17.96■□□□□ 0.47
CIITA-205ENST00000571186 SH3TC2Q8TF17 1288 aa17.96■□□□□ 0.47
CIITA-205ENST00000571186 MRIQ9BWK5 157 aa17.96■□□□□ 0.47
CIITA-205ENST00000571186 ARHGAP39Q9C0H5 1083 aa17.96■□□□□ 0.47
CIITA-205ENST00000571186 E9PSI1 815 aa17.95■□□□□ 0.46
CIITA-205ENST00000571186 LACTBP83111 547 aaPredicted RBP17.95■□□□□ 0.46
CIITA-205ENST00000571186 RABL6Q3YEC7 729 aaPredicted RBP17.95■□□□□ 0.46
CIITA-205ENST00000571186 FKBP1CQ5VVH2 108 aa17.95■□□□□ 0.46
CIITA-205ENST00000571186 DCAF15Q66K64 600 aa17.95■□□□□ 0.46
CIITA-205ENST00000571186 APOBEC3HQ6NTF7 200 aaKnown RBP17.95■□□□□ 0.46
CIITA-205ENST00000571186 MIGA2Q7L4E1 593 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms