RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 TEPSINQ96N21 525 aa18.58■□□□□ 0.56
NDE1-203ENST00000570727 IGF2BP3O00425 579 aaKnown RBP eCLIP18.57■□□□□ 0.56
NDE1-203ENST00000570727 FKTNO75072 461 aa18.57■□□□□ 0.56
NDE1-203ENST00000570727 ALDH1A1P00352 501 aa18.57■□□□□ 0.56
NDE1-203ENST00000570727 IREB2P48200 963 aaKnown RBP18.57■□□□□ 0.56
NDE1-203ENST00000570727 BCAMP50895 628 aa18.57■□□□□ 0.56
NDE1-203ENST00000570727 VPS37DQ86XT2 251 aa18.57■□□□□ 0.56
NDE1-203ENST00000570727 CDAN1Q8IWY9 1227 aa18.57■□□□□ 0.56
NDE1-203ENST00000570727 TRMT2AQ8IZ69 625 aaKnown RBP18.57■□□□□ 0.56
NDE1-203ENST00000570727 HTTP42858 3142 aa18.56■□□□□ 0.56
NDE1-203ENST00000570727 FGFR2P21802 821 aa18.56■□□□□ 0.56
NDE1-203ENST00000570727 RFX5P48382 616 aaPredicted RBP18.56■□□□□ 0.56
NDE1-203ENST00000570727 CHAF1AQ13111 956 aaPredicted RBP18.56■□□□□ 0.56
NDE1-203ENST00000570727 ALDH1L2Q3SY69 923 aa18.56■□□□□ 0.56
NDE1-203ENST00000570727 CAVIN4Q5BKX8 364 aa18.56■□□□□ 0.56
NDE1-203ENST00000570727 ANKRD13AQ8IZ07 590 aa18.56■□□□□ 0.56
NDE1-203ENST00000570727 TCP10L2B9ZVM9 353 aa18.55■□□□□ 0.56
NDE1-203ENST00000570727 HDLBPQ00341 1268 aaKnown RBP18.55■□□□□ 0.56
NDE1-203ENST00000570727 TNFAIP1Q13829 316 aa18.55■□□□□ 0.56
NDE1-203ENST00000570727 TBC1D22AQ8WUA7 517 aa18.55■□□□□ 0.56
NDE1-203ENST00000570727 PDE4DIPQ5VU43 2346 aa18.54■□□□□ 0.56
NDE1-203ENST00000570727 OTOFQ9HC10 1997 aa18.54■□□□□ 0.56
NDE1-203ENST00000570727 TESPA1A2RU30 521 aaPredicted RBP18.54■□□□□ 0.56
NDE1-203ENST00000570727 FRAT2O75474 233 aaPredicted RBP18.54■□□□□ 0.56
NDE1-203ENST00000570727 FBXO46Q6PJ61 603 aaPredicted RBP18.54■□□□□ 0.56
NDE1-203ENST00000570727 PTPN18Q99952 460 aa18.54■□□□□ 0.56
NDE1-203ENST00000570727 MRIQ9BWK5 157 aa18.54■□□□□ 0.56
NDE1-203ENST00000570727 TMEM39BQ9GZU3 492 aa18.54■□□□□ 0.56
NDE1-203ENST00000570727 CENPFP49454 3210 aa18.54■□□□□ 0.56
NDE1-203ENST00000570727 EYA2O00167 538 aa18.53■□□□□ 0.56
NDE1-203ENST00000570727 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.53■□□□□ 0.56
NDE1-203ENST00000570727 KIF16BQ96L93 1317 aa18.52■□□□□ 0.56
NDE1-203ENST00000570727 IFIT1P09914 478 aaKnown RBP18.52■□□□□ 0.56
NDE1-203ENST00000570727 PUM3Q15397 648 aaKnown RBP18.52■□□□□ 0.56
NDE1-203ENST00000570727 ATG9AQ7Z3C6 839 aa18.52■□□□□ 0.56
NDE1-203ENST00000570727 TEKT1Q969V4 418 aa18.52■□□□□ 0.56
NDE1-203ENST00000570727 MS4A4AQ96JQ5 239 aa18.52■□□□□ 0.56
NDE1-203ENST00000570727 ZDHHC15Q96MV8 337 aa18.52■□□□□ 0.56
NDE1-203ENST00000570727 ELP3Q9H9T3 547 aa18.52■□□□□ 0.56
NDE1-203ENST00000570727 SMC4Q9NTJ3 1288 aa18.52■□□□□ 0.56
NDE1-203ENST00000570727 TNNI2P48788 182 aa18.51■□□□□ 0.55
NDE1-203ENST00000570727 CACNB3P54284 484 aa18.51■□□□□ 0.55
NDE1-203ENST00000570727 APOBEC3HQ6NTF7 200 aaKnown RBP18.51■□□□□ 0.55
NDE1-203ENST00000570727 CNKSR2Q8WXI2 1034 aa18.51■□□□□ 0.55
NDE1-203ENST00000570727 OPTNQ96CV9 577 aa18.51■□□□□ 0.55
NDE1-203ENST00000570727 MAP3K9P80192 1104 aa18.5■□□□□ 0.55
NDE1-203ENST00000570727 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.5■□□□□ 0.55
NDE1-203ENST00000570727 NOB1Q9ULX3 412 aaKnown RBP18.5■□□□□ 0.55
NDE1-203ENST00000570727 SUGT1Q9Y2Z0 365 aa18.5■□□□□ 0.55
NDE1-203ENST00000570727 CRHR2Q13324 411 aa18.49■□□□□ 0.55
NDE1-203ENST00000570727 VGLL4Q14135 290 aa18.49■□□□□ 0.55
NDE1-203ENST00000570727 OTUD7BQ6GQQ9 843 aa18.49■□□□□ 0.55
NDE1-203ENST00000570727 LPIN2Q92539 896 aa18.49■□□□□ 0.55
NDE1-203ENST00000570727 SLC5A1P13866 664 aa18.48■□□□□ 0.55
NDE1-203ENST00000570727 FKBP1CQ5VVH2 108 aa18.48■□□□□ 0.55
NDE1-203ENST00000570727 HHIPL2Q6UWX4 724 aa18.48■□□□□ 0.55
NDE1-203ENST00000570727 OTOP1Q7RTM1 612 aa18.48■□□□□ 0.55
NDE1-203ENST00000570727 FAM83AQ86UY5 434 aa18.48■□□□□ 0.55
NDE1-203ENST00000570727 TRIM17Q9Y577 477 aa18.48■□□□□ 0.55
NDE1-203ENST00000570727 MYH13Q9UKX3 1938 aa18.48■□□□□ 0.55
NDE1-203ENST00000570727 CT47B1P0C2W7 299 aaPredicted RBP18.47■□□□□ 0.55
NDE1-203ENST00000570727 UBTFL1P0CB47 393 aaPredicted RBP18.47■□□□□ 0.55
NDE1-203ENST00000570727 CAP1Q01518 475 aa18.47■□□□□ 0.55
NDE1-203ENST00000570727 BRI3BPQ8WY22 251 aa18.47■□□□□ 0.55
NDE1-203ENST00000570727 SIL1Q9H173 461 aa18.47■□□□□ 0.55
NDE1-203ENST00000570727 MKI67P46013 3256 aaKnown RBP18.47■□□□□ 0.55
NDE1-203ENST00000570727 MAST3O60307 1309 aa18.47■□□□□ 0.55
NDE1-203ENST00000570727 CIAO1O76071 339 aa18.46■□□□□ 0.55
NDE1-203ENST00000570727 SLC34A2O95436 690 aa18.46■□□□□ 0.55
NDE1-203ENST00000570727 WDR66Q8TBY9 1149 aa18.46■□□□□ 0.55
NDE1-203ENST00000570727 CD99L2Q8TCZ2 262 aa18.46■□□□□ 0.55
NDE1-203ENST00000570727 FBXO3Q9UK99 471 aa18.46■□□□□ 0.55
NDE1-203ENST00000570727 ERO1AQ96HE7 468 aa18.45■□□□□ 0.54
NDE1-203ENST00000570727 TMOD2Q9NZR1 351 aa18.45■□□□□ 0.54
NDE1-203ENST00000570727 CEP126Q9P2H0 1117 aa18.45■□□□□ 0.54
NDE1-203ENST00000570727 CSADQ9Y600 493 aa18.45■□□□□ 0.54
NDE1-203ENST00000570727 SNCAIPQ9Y6H5 919 aa18.45■□□□□ 0.54
NDE1-203ENST00000570727 GTF2A2P52657 109 aa18.44■□□□□ 0.54
NDE1-203ENST00000570727 SP3Q02447 781 aa18.44■□□□□ 0.54
NDE1-203ENST00000570727 ATP2B3Q16720 1220 aa18.44■□□□□ 0.54
NDE1-203ENST00000570727 ZKSCAN4Q969J2 545 aaPredicted RBP18.44■□□□□ 0.54
NDE1-203ENST00000570727 OTUD5Q96G74 571 aa18.44■□□□□ 0.54
NDE1-203ENST00000570727 API5Q9BZZ5 524 aaKnown RBP18.44■□□□□ 0.54
NDE1-203ENST00000570727 PA2G4Q9UQ80 394 aaKnown RBP18.44■□□□□ 0.54
NDE1-203ENST00000570727 PTPN22Q9Y2R2 807 aa18.44■□□□□ 0.54
NDE1-203ENST00000570727 LRRFIP2Q9Y608 721 aaKnown RBP18.44■□□□□ 0.54
NDE1-203ENST00000570727 CCL15-CCL14A0A0B4J2E2 113 aa18.43■□□□□ 0.54
NDE1-203ENST00000570727 SPDYE5A6NIY4 337 aa18.43■□□□□ 0.54
NDE1-203ENST00000570727 RARSP54136 660 aaKnown RBP18.43■□□□□ 0.54
NDE1-203ENST00000570727 CCL15Q16663 113 aa18.43■□□□□ 0.54
NDE1-203ENST00000570727 FAM43AQ8N2R8 423 aa18.43■□□□□ 0.54
NDE1-203ENST00000570727 WRNIP1Q96S55 665 aa18.43■□□□□ 0.54
NDE1-203ENST00000570727 DAGLAQ9Y4D2 1042 aa18.43■□□□□ 0.54
NDE1-203ENST00000570727 BRCA2P51587 3418 aa18.42■□□□□ 0.54
NDE1-203ENST00000570727 PRDX5P30044 214 aa18.42■□□□□ 0.54
NDE1-203ENST00000570727 IL15P40933 162 aaPredicted RBP18.42■□□□□ 0.54
NDE1-203ENST00000570727 PHKA1P46020 1223 aa18.42■□□□□ 0.54
NDE1-203ENST00000570727 DIXDC1Q155Q3 683 aa18.42■□□□□ 0.54
NDE1-203ENST00000570727 CDC42EP5Q6NZY7 148 aa18.42■□□□□ 0.54
NDE1-203ENST00000570727 MIGA2Q7L4E1 593 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms