RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 OLFM4Q6UX06 510 aa8□□□□□ -1.13
CTDNEP1-204ENST00000570484 PSMD1Q99460 953 aa8□□□□□ -1.13
CTDNEP1-204ENST00000570484 SYT17Q9BSW7 474 aa8□□□□□ -1.13
CTDNEP1-204ENST00000570484 STAP2Q9UGK3 403 aa8□□□□□ -1.13
CTDNEP1-204ENST00000570484 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8□□□□□ -1.13
CTDNEP1-204ENST00000570484 SALL3Q9BXA9 1300 aa8□□□□□ -1.13
CTDNEP1-204ENST00000570484 SNAP23O00161 211 aa7.99□□□□□ -1.13
CTDNEP1-204ENST00000570484 SNPHO15079 494 aa7.99□□□□□ -1.13
CTDNEP1-204ENST00000570484 ATP5JP18859 108 aa7.99□□□□□ -1.13
CTDNEP1-204ENST00000570484 KLRK1P26718 216 aa7.99□□□□□ -1.13
CTDNEP1-204ENST00000570484 ARID4AP29374 1257 aaPredicted RBP7.99□□□□□ -1.13
CTDNEP1-204ENST00000570484 MLLT3P42568 568 aaPredicted RBP7.99□□□□□ -1.13
CTDNEP1-204ENST00000570484 PHKA1P46020 1223 aa7.99□□□□□ -1.13
CTDNEP1-204ENST00000570484 TTF1Q15361 905 aaPredicted RBP7.99□□□□□ -1.13
CTDNEP1-204ENST00000570484 BMP2KLQ5H9B9 411 aa7.99□□□□□ -1.13
CTDNEP1-204ENST00000570484 SLC51AQ86UW1 340 aa7.99□□□□□ -1.13
CTDNEP1-204ENST00000570484 NIM1KQ8IY84 436 aa7.99□□□□□ -1.13
CTDNEP1-204ENST00000570484 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.99□□□□□ -1.13
CTDNEP1-204ENST00000570484 FBXW7Q969H0 707 aa7.99□□□□□ -1.13
CTDNEP1-204ENST00000570484 RILPL2Q969X0 211 aa7.99□□□□□ -1.13
CTDNEP1-204ENST00000570484 GPR101Q96P66 508 aaPredicted RBP7.99□□□□□ -1.13
CTDNEP1-204ENST00000570484 FSD1Q9BTV5 496 aa7.99□□□□□ -1.13
CTDNEP1-204ENST00000570484 COA1Q9GZY4 146 aa7.99□□□□□ -1.13
CTDNEP1-204ENST00000570484 BOLA2Q9H3K6 86 aa7.99□□□□□ -1.13
CTDNEP1-204ENST00000570484 OSBPL3Q9H4L5 887 aa7.99□□□□□ -1.13
CTDNEP1-204ENST00000570484 PAG1Q9NWQ8 432 aa7.99□□□□□ -1.13
CTDNEP1-204ENST00000570484 POLLQ9UGP5 575 aa7.99□□□□□ -1.13
CTDNEP1-204ENST00000570484 DENND2AQ9ULE3 1009 aa7.99□□□□□ -1.13
CTDNEP1-204ENST00000570484 A0A1B0GUL6 1792 aa7.98□□□□□ -1.13
CTDNEP1-204ENST00000570484 GOLIM4O00461 696 aa7.98□□□□□ -1.13
CTDNEP1-204ENST00000570484 BCAMP50895 628 aa7.98□□□□□ -1.13
CTDNEP1-204ENST00000570484 KIAA2012Q0VF49 1180 aa7.98□□□□□ -1.13
CTDNEP1-204ENST00000570484 CHAF1AQ13111 956 aaPredicted RBP7.98□□□□□ -1.13
CTDNEP1-204ENST00000570484 RASGRF1Q13972 1273 aa7.98□□□□□ -1.13
CTDNEP1-204ENST00000570484 GPR162Q16538 588 aa7.98□□□□□ -1.13
CTDNEP1-204ENST00000570484 AOC3Q16853 763 aa7.98□□□□□ -1.13
CTDNEP1-204ENST00000570484 SMYD5Q6GMV2 418 aa7.98□□□□□ -1.13
CTDNEP1-204ENST00000570484 C15orf52Q6ZUT6 534 aaKnown RBP7.98□□□□□ -1.13
CTDNEP1-204ENST00000570484 LARGE2Q8N3Y3 721 aa7.98□□□□□ -1.13
CTDNEP1-204ENST00000570484 ZGPATQ8N5A5 531 aaKnown RBP7.98□□□□□ -1.13
CTDNEP1-204ENST00000570484 SPATA5Q8NB90 893 aa7.98□□□□□ -1.13
CTDNEP1-204ENST00000570484 PI4K2BQ8TCG2 481 aa7.98□□□□□ -1.13
CTDNEP1-204ENST00000570484 C7orf43Q8WVR3 580 aa7.98□□□□□ -1.13
CTDNEP1-204ENST00000570484 JDP2Q8WYK2 163 aa7.98□□□□□ -1.13
CTDNEP1-204ENST00000570484 EVI5LQ96CN4 794 aa7.98□□□□□ -1.13
CTDNEP1-204ENST00000570484 ZNF512BQ96KM6 892 aaPredicted RBP7.98□□□□□ -1.13
CTDNEP1-204ENST00000570484 HAUS7Q99871 368 aa7.98□□□□□ -1.13
CTDNEP1-204ENST00000570484 RTFDC1Q9BY42 306 aaPredicted RBP7.98□□□□□ -1.13
CTDNEP1-204ENST00000570484 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.98□□□□□ -1.13
CTDNEP1-204ENST00000570484 DIAPH3Q9NSV4 1193 aa7.98□□□□□ -1.13
CTDNEP1-204ENST00000570484 IQSEC3Q9UPP2 1182 aaPredicted RBP7.98□□□□□ -1.13
CTDNEP1-204ENST00000570484 PDS5AQ29RF7 1337 aaKnown RBP7.98□□□□□ -1.13
CTDNEP1-204ENST00000570484 LTBP3Q9NS15 1303 aa7.98□□□□□ -1.13
CTDNEP1-204ENST00000570484 LTBP1Q14766 1721 aa7.98□□□□□ -1.13
CTDNEP1-204ENST00000570484 RFX7Q2KHR2 1363 aa7.97□□□□□ -1.13
CTDNEP1-204ENST00000570484 SNED1Q8TER0 1413 aa7.97□□□□□ -1.13
CTDNEP1-204ENST00000570484 ECE2O60344 883 aa7.97□□□□□ -1.13
CTDNEP1-204ENST00000570484 CDC45O75419 566 aa7.97□□□□□ -1.13
CTDNEP1-204ENST00000570484 MAP4K4O95819 1239 aaPredicted RBP7.97□□□□□ -1.13
CTDNEP1-204ENST00000570484 GSPT1P15170 499 aaKnown RBP7.97□□□□□ -1.13
CTDNEP1-204ENST00000570484 IARSP41252 1262 aaKnown RBP7.97□□□□□ -1.13
CTDNEP1-204ENST00000570484 MCAMP43121 646 aa7.97□□□□□ -1.13
CTDNEP1-204ENST00000570484 ZSCAN25Q6NSZ9 544 aa7.97□□□□□ -1.13
CTDNEP1-204ENST00000570484 ARHGAP27Q6ZUM4 889 aa7.97□□□□□ -1.13
CTDNEP1-204ENST00000570484 FAM84BQ96KN1 310 aaPredicted RBP7.97□□□□□ -1.13
CTDNEP1-204ENST00000570484 VPS33BQ9H267 617 aa7.97□□□□□ -1.13
CTDNEP1-204ENST00000570484 DBNDD1Q9H9R9 158 aa7.97□□□□□ -1.13
CTDNEP1-204ENST00000570484 CD209Q9NNX6 404 aa7.97□□□□□ -1.13
CTDNEP1-204ENST00000570484 SNRKQ9NRH2 765 aa7.97□□□□□ -1.13
CTDNEP1-204ENST00000570484 ZNF277Q9NRM2 450 aaPredicted RBP7.97□□□□□ -1.13
CTDNEP1-204ENST00000570484 CACNA1SQ13698 1873 aa7.97□□□□□ -1.13
CTDNEP1-204ENST00000570484 COL1A1P02452 1464 aaPredicted RBP7.96□□□□□ -1.13
CTDNEP1-204ENST00000570484 NFKBIEO00221 500 aa7.96□□□□□ -1.14
CTDNEP1-204ENST00000570484 HIP1O00291 1037 aa7.96□□□□□ -1.14
CTDNEP1-204ENST00000570484 EIF5BO60841 1220 aaKnown RBP7.96□□□□□ -1.14
CTDNEP1-204ENST00000570484 IDH1O75874 414 aaKnown RBP7.96□□□□□ -1.14
CTDNEP1-204ENST00000570484 IL1R1P14778 569 aa7.96□□□□□ -1.14
CTDNEP1-204ENST00000570484 SDSP20132 328 aa7.96□□□□□ -1.14
CTDNEP1-204ENST00000570484 ZAP70P43403 619 aa7.96□□□□□ -1.14
CTDNEP1-204ENST00000570484 RASSF7Q02833 373 aa7.96□□□□□ -1.14
CTDNEP1-204ENST00000570484 MAP3K12Q12852 859 aa7.96□□□□□ -1.14
CTDNEP1-204ENST00000570484 SPTY2D1Q68D10 685 aaPredicted RBP7.96□□□□□ -1.14
CTDNEP1-204ENST00000570484 PI16Q6UXB8 463 aa7.96□□□□□ -1.14
CTDNEP1-204ENST00000570484 PODNQ7Z5L7 613 aa7.96□□□□□ -1.14
CTDNEP1-204ENST00000570484 FBXO33Q7Z6M2 555 aa7.96□□□□□ -1.14
CTDNEP1-204ENST00000570484 TXNRD3Q86VQ6 643 aa7.96□□□□□ -1.14
CTDNEP1-204ENST00000570484 DZIP1Q86YF9 867 aaKnown RBP7.96□□□□□ -1.14
CTDNEP1-204ENST00000570484 WDR66Q8TBY9 1149 aa7.96□□□□□ -1.14
CTDNEP1-204ENST00000570484 TBC1D22AQ8WUA7 517 aa7.96□□□□□ -1.14
CTDNEP1-204ENST00000570484 HMG20BQ9P0W2 317 aa7.96□□□□□ -1.14
CTDNEP1-204ENST00000570484 LRP2BPQ9P2M1 347 aa7.96□□□□□ -1.14
CTDNEP1-204ENST00000570484 ABCF2Q9UG63 623 aa7.96□□□□□ -1.14
CTDNEP1-204ENST00000570484 SLX4Q8IY92 1834 aa7.96□□□□□ -1.14
CTDNEP1-204ENST00000570484 WTIPA6NIX2 430 aaPredicted RBP7.95□□□□□ -1.14
CTDNEP1-204ENST00000570484 GRIN3BO60391 1043 aa7.95□□□□□ -1.14
CTDNEP1-204ENST00000570484 OSBPP22059 807 aa7.95□□□□□ -1.14
CTDNEP1-204ENST00000570484 SCARF1Q14162 830 aa7.95□□□□□ -1.14
CTDNEP1-204ENST00000570484 MFSD14BQ5SR56 506 aa7.95□□□□□ -1.14
CTDNEP1-204ENST00000570484 KBTBD3Q8NAB2 608 aa7.95□□□□□ -1.14
CTDNEP1-204ENST00000570484 TDRD7Q8NHU6 1098 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms