RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 STX17P56962 302 aa17.69■□□□□ 0.42
USP43-202ENST00000570475 CTDSPL2Q05D32 466 aa17.68■□□□□ 0.42
USP43-202ENST00000570475 KARSQ15046 597 aaKnown RBP17.68■□□□□ 0.42
USP43-202ENST00000570475 TSGA10IPQ3SY00 556 aa17.68■□□□□ 0.42
USP43-202ENST00000570475 VPS37DQ86XT2 251 aa17.68■□□□□ 0.42
USP43-202ENST00000570475 RASSF8Q8NHQ8 419 aa17.68■□□□□ 0.42
USP43-202ENST00000570475 PRDM4Q9UKN5 801 aa17.68■□□□□ 0.42
USP43-202ENST00000570475 SLC12A7Q9Y666 1083 aa17.68■□□□□ 0.42
USP43-202ENST00000570475 AKAP12Q02952 1782 aa17.68■□□□□ 0.42
USP43-202ENST00000570475 KIF28PB7ZC32 967 aa17.68■□□□□ 0.42
USP43-202ENST00000570475 ZBTB43O43298 467 aa17.68■□□□□ 0.42
USP43-202ENST00000570475 GNG11P61952 73 aa17.68■□□□□ 0.42
USP43-202ENST00000570475 KRT40Q6A162 431 aa17.68■□□□□ 0.42
USP43-202ENST00000570475 KRT222Q8N1A0 295 aa17.68■□□□□ 0.42
USP43-202ENST00000570475 ZNF274Q96GC6 653 aaPredicted RBP17.68■□□□□ 0.42
USP43-202ENST00000570475 AFMP43652 599 aa17.68■□□□□ 0.42
USP43-202ENST00000570475 MIGA1Q8NAN2 632 aa17.68■□□□□ 0.42
USP43-202ENST00000570475 ERICH2A1L162 156 aa17.67■□□□□ 0.42
USP43-202ENST00000570475 FOXO4P98177 505 aa17.67■□□□□ 0.42
USP43-202ENST00000570475 FMR1NBQ8N0W7 255 aaPredicted RBP17.67■□□□□ 0.42
USP43-202ENST00000570475 ZNF397Q8NF99 534 aaPredicted RBP17.67■□□□□ 0.42
USP43-202ENST00000570475 EPC1Q9H2F5 836 aa17.67■□□□□ 0.42
USP43-202ENST00000570475 FBXO38Q6PIJ6 1188 aa17.67■□□□□ 0.42
USP43-202ENST00000570475 TMOD3Q9NYL9 352 aa17.67■□□□□ 0.42
USP43-202ENST00000570475 COBLO75128 1261 aa17.67■□□□□ 0.42
USP43-202ENST00000570475 CCDC102BQ68D86 513 aa17.67■□□□□ 0.42
USP43-202ENST00000570475 KMT5BQ4FZB7 885 aa17.66■□□□□ 0.42
USP43-202ENST00000570475 ZFP91Q96JP5 570 aaPredicted RBP17.66■□□□□ 0.42
USP43-202ENST00000570475 FANCLQ9NW38 375 aa17.66■□□□□ 0.42
USP43-202ENST00000570475 EXOSC10Q01780 885 aaKnown RBP17.66■□□□□ 0.42
USP43-202ENST00000570475 SKIDA1Q1XH10 827 aa17.66■□□□□ 0.42
USP43-202ENST00000570475 DNAJC10Q8IXB1 793 aa17.66■□□□□ 0.42
USP43-202ENST00000570475 GRAMD1CQ8IYS0 662 aa17.66■□□□□ 0.42
USP43-202ENST00000570475 FEZ1Q99689 392 aa17.66■□□□□ 0.42
USP43-202ENST00000570475 SENP2Q9HC62 589 aa17.66■□□□□ 0.42
USP43-202ENST00000570475 RTEL1Q9NZ71 1219 aa17.66■□□□□ 0.42
USP43-202ENST00000570475 ADKP55263 362 aaKnown RBP17.65■□□□□ 0.42
USP43-202ENST00000570475 APPBP2Q92624 585 aa17.65■□□□□ 0.42
USP43-202ENST00000570475 STAMQ92783 540 aa17.65■□□□□ 0.42
USP43-202ENST00000570475 CARD6Q9BX69 1037 aa17.65■□□□□ 0.42
USP43-202ENST00000570475 ANKARQ7Z5J8 1434 aa17.65■□□□□ 0.42
USP43-202ENST00000570475 CCDC150Q8NCX0 1101 aa17.65■□□□□ 0.42
USP43-202ENST00000570475 GTPBP4Q9BZE4 634 aaKnown RBP17.65■□□□□ 0.42
USP43-202ENST00000570475 UTYO14607 1347 aa17.65■□□□□ 0.42
USP43-202ENST00000570475 SH3TC1Q8TE82 1336 aa17.65■□□□□ 0.42
USP43-202ENST00000570475 ITGA6P23229 1130 aa17.65■□□□□ 0.42
USP43-202ENST00000570475 CCZ1BP86790 482 aa17.65■□□□□ 0.42
USP43-202ENST00000570475 CCZ1P86791 482 aaPredicted RBP17.65■□□□□ 0.42
USP43-202ENST00000570475 ILDR1Q86SU0 546 aaPredicted RBP17.65■□□□□ 0.42
USP43-202ENST00000570475 C19orf44Q9H6X5 657 aa17.65■□□□□ 0.42
USP43-202ENST00000570475 CDKL5O76039 1030 aa17.64■□□□□ 0.42
USP43-202ENST00000570475 NLRP12P59046 1061 aa17.64■□□□□ 0.42
USP43-202ENST00000570475 TRIM22Q8IYM9 498 aa17.64■□□□□ 0.42
USP43-202ENST00000570475 ANKRD7Q92527 254 aa17.64■□□□□ 0.42
USP43-202ENST00000570475 ERO1AQ96HE7 468 aa17.64■□□□□ 0.42
USP43-202ENST00000570475 CCDC34Q96HJ3 373 aa17.64■□□□□ 0.42
USP43-202ENST00000570475 PPP1R13BQ96KQ4 1090 aa17.64■□□□□ 0.42
USP43-202ENST00000570475 MPHOSPH8Q99549 860 aa17.64■□□□□ 0.42
USP43-202ENST00000570475 DESI2Q9BSY9 194 aa17.64■□□□□ 0.42
USP43-202ENST00000570475 ARGLU1Q9NWB6 273 aaPredicted RBP17.64■□□□□ 0.42
USP43-202ENST00000570475 LRP2BPQ9P2M1 347 aa17.64■□□□□ 0.42
USP43-202ENST00000570475 ANGEL1Q9UNK9 670 aaKnown RBP17.64■□□□□ 0.42
USP43-202ENST00000570475 WDHD1O75717 1129 aaPredicted RBP17.64■□□□□ 0.41
USP43-202ENST00000570475 SSRP1Q08945 709 aaKnown RBP17.64■□□□□ 0.41
USP43-202ENST00000570475 TMCO3Q6UWJ1 677 aa17.64■□□□□ 0.41
USP43-202ENST00000570475 CCDC191Q8NCU4 936 aa17.64■□□□□ 0.41
USP43-202ENST00000570475 DPF2Q92785 391 aa17.64■□□□□ 0.41
USP43-202ENST00000570475 TMEM232C9JQI7 657 aa17.64■□□□□ 0.41
USP43-202ENST00000570475 H7C1W4 665 aa17.64■□□□□ 0.41
USP43-202ENST00000570475 FOXN1O15353 648 aa17.64■□□□□ 0.41
USP43-202ENST00000570475 ARMCX5Q6P1M9 558 aa17.64■□□□□ 0.41
USP43-202ENST00000570475 ANKRD18BA2A2Z9 1011 aa17.63■□□□□ 0.41
USP43-202ENST00000570475 BTBD18B2RXH4 712 aa17.63■□□□□ 0.41
USP43-202ENST00000570475 MAGEB6Q8N7X4 407 aa17.63■□□□□ 0.41
USP43-202ENST00000570475 ENGASEQ8NFI3 743 aa17.63■□□□□ 0.41
USP43-202ENST00000570475 ARMT1Q9H993 441 aa17.63■□□□□ 0.41
USP43-202ENST00000570475 LZTFL1Q9NQ48 299 aa17.63■□□□□ 0.41
USP43-202ENST00000570475 ZNF532Q9HCE3 1301 aa17.63■□□□□ 0.41
USP43-202ENST00000570475 PIK3C2AO00443 1686 aa17.63■□□□□ 0.41
USP43-202ENST00000570475 POLR2DO15514 142 aaKnown RBP17.63■□□□□ 0.41
USP43-202ENST00000570475 CTIFO43310 598 aaKnown RBP17.63■□□□□ 0.41
USP43-202ENST00000570475 KIF23Q02241 960 aaPredicted RBP17.63■□□□□ 0.41
USP43-202ENST00000570475 RABL6Q3YEC7 729 aaPredicted RBP17.63■□□□□ 0.41
USP43-202ENST00000570475 BRAPQ7Z569 592 aa17.63■□□□□ 0.41
USP43-202ENST00000570475 LRRN4CLQ8ND94 238 aa17.63■□□□□ 0.41
USP43-202ENST00000570475 HOOK1Q9UJC3 728 aaKnown RBP17.63■□□□□ 0.41
USP43-202ENST00000570475 KCNH3Q9ULD8 1083 aa17.63■□□□□ 0.41
USP43-202ENST00000570475 MYL5Q02045 173 aa17.63■□□□□ 0.41
USP43-202ENST00000570475 GREM2Q9H772 168 aa17.63■□□□□ 0.41
USP43-202ENST00000570475 CBFA2T2O43439 604 aa17.62■□□□□ 0.41
USP43-202ENST00000570475 ZFYP08048 801 aaPredicted RBP17.62■□□□□ 0.41
USP43-202ENST00000570475 RBM43Q6ZSC3 357 aaKnown RBP17.62■□□□□ 0.41
USP43-202ENST00000570475 ALDH8A1Q9H2A2 487 aaPredicted RBP17.62■□□□□ 0.41
USP43-202ENST00000570475 PCDHA5Q9Y5H7 936 aa17.62■□□□□ 0.41
USP43-202ENST00000570475 MBD4O95243 580 aa17.62■□□□□ 0.41
USP43-202ENST00000570475 SETD1AO15047 1707 aaKnown RBP17.62■□□□□ 0.41
USP43-202ENST00000570475 PHKA1P46020 1223 aa17.61■□□□□ 0.41
USP43-202ENST00000570475 E4F1Q66K89 784 aaPredicted RBP17.61■□□□□ 0.41
USP43-202ENST00000570475 DHX58Q96C10 678 aa17.61■□□□□ 0.41
USP43-202ENST00000570475 RNF216Q9NWF9 866 aaPredicted RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms