RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 MCMDC2Q4G0Z9 681 aa18.56■□□□□ 0.56
HERPUD1-219ENST00000570273 NAA16Q6N069 864 aaPredicted RBP18.56■□□□□ 0.56
HERPUD1-219ENST00000570273 SEC62Q99442 399 aaKnown RBP18.56■□□□□ 0.56
HERPUD1-219ENST00000570273 ZNRF3Q9ULT6 936 aa18.56■□□□□ 0.56
HERPUD1-219ENST00000570273 MAST3O60307 1309 aa18.55■□□□□ 0.56
HERPUD1-219ENST00000570273 MYO5AQ9Y4I1 1855 aaKnown RBP18.55■□□□□ 0.56
HERPUD1-219ENST00000570273 M0R2C6 588 aa18.55■□□□□ 0.56
HERPUD1-219ENST00000570273 IGSF3O75054 1194 aa18.55■□□□□ 0.56
HERPUD1-219ENST00000570273 DACT2Q5SW24 774 aa18.55■□□□□ 0.56
HERPUD1-219ENST00000570273 ZNF589Q86UQ0 364 aaPredicted RBP18.55■□□□□ 0.56
HERPUD1-219ENST00000570273 CERS5Q8N5B7 392 aa18.55■□□□□ 0.56
HERPUD1-219ENST00000570273 OSBP2Q969R2 916 aa18.55■□□□□ 0.56
HERPUD1-219ENST00000570273 NSUN4Q96CB9 384 aaKnown RBP18.55■□□□□ 0.56
HERPUD1-219ENST00000570273 MXD3Q9BW11 206 aa18.55■□□□□ 0.56
HERPUD1-219ENST00000570273 UPF2Q9HAU5 1272 aaKnown RBP18.55■□□□□ 0.56
HERPUD1-219ENST00000570273 ANO2Q9NQ90 1003 aa18.55■□□□□ 0.56
HERPUD1-219ENST00000570273 SCN9AQ15858 1988 aa18.54■□□□□ 0.56
HERPUD1-219ENST00000570273 RAD17O75943 681 aa18.54■□□□□ 0.56
HERPUD1-219ENST00000570273 PRELPP51888 382 aa18.54■□□□□ 0.56
HERPUD1-219ENST00000570273 GSTO1P78417 241 aa18.54■□□□□ 0.56
HERPUD1-219ENST00000570273 CCDC129Q6ZRS4 1044 aa18.54■□□□□ 0.56
HERPUD1-219ENST00000570273 KIAA1211Q6ZU35 1233 aa18.54■□□□□ 0.56
HERPUD1-219ENST00000570273 SUGT1Q9Y2Z0 365 aa18.54■□□□□ 0.56
HERPUD1-219ENST00000570273 CCDC171Q6TFL3 1326 aa18.54■□□□□ 0.56
HERPUD1-219ENST00000570273 GRIN3BO60391 1043 aa18.53■□□□□ 0.56
HERPUD1-219ENST00000570273 FKBP1AP62942 108 aaKnown RBP18.53■□□□□ 0.56
HERPUD1-219ENST00000570273 TMED8Q6PL24 325 aaPredicted RBP18.53■□□□□ 0.56
HERPUD1-219ENST00000570273 ZNF384Q8TF68 577 aa18.53■□□□□ 0.56
HERPUD1-219ENST00000570273 PUS7LQ9H0K6 701 aaKnown RBP18.53■□□□□ 0.56
HERPUD1-219ENST00000570273 DCAF8L1A6NGE4 600 aa18.52■□□□□ 0.56
HERPUD1-219ENST00000570273 F8W031 263 aaPredicted RBP18.52■□□□□ 0.56
HERPUD1-219ENST00000570273 LMNB1P20700 586 aa18.52■□□□□ 0.56
HERPUD1-219ENST00000570273 AIDAQ96BJ3 306 aa18.52■□□□□ 0.56
HERPUD1-219ENST00000570273 PSMD14O00487 310 aa18.51■□□□□ 0.55
HERPUD1-219ENST00000570273 GPAA1O43292 621 aa18.51■□□□□ 0.55
HERPUD1-219ENST00000570273 MBD4O95243 580 aa18.51■□□□□ 0.55
HERPUD1-219ENST00000570273 DIXDC1Q155Q3 683 aa18.51■□□□□ 0.55
HERPUD1-219ENST00000570273 ADGRA1Q86SQ6 560 aa18.51■□□□□ 0.55
HERPUD1-219ENST00000570273 MIGA1Q8NAN2 632 aa18.51■□□□□ 0.55
HERPUD1-219ENST00000570273 TTF2Q9UNY4 1162 aaKnown RBP18.51■□□□□ 0.55
HERPUD1-219ENST00000570273 ZNF646O15015 1829 aaPredicted RBP18.51■□□□□ 0.55
HERPUD1-219ENST00000570273 LDHCP07864 332 aa18.5■□□□□ 0.55
HERPUD1-219ENST00000570273 CIAPIN1Q6FI81 312 aa18.5■□□□□ 0.55
HERPUD1-219ENST00000570273 RSBN1LQ6PCB5 846 aaPredicted RBP18.5■□□□□ 0.55
HERPUD1-219ENST00000570273 SLF2Q8IX21 1173 aa18.5■□□□□ 0.55
HERPUD1-219ENST00000570273 LSG1Q9H089 658 aaKnown RBP18.5■□□□□ 0.55
HERPUD1-219ENST00000570273 MROH7-TTC4A0A0A0MT08 1334 aa18.5■□□□□ 0.55
HERPUD1-219ENST00000570273 MYO3BQ8WXR4 1341 aa18.5■□□□□ 0.55
HERPUD1-219ENST00000570273 PSME4Q14997 1843 aa18.5■□□□□ 0.55
HERPUD1-219ENST00000570273 SBF1O95248 1867 aa18.5■□□□□ 0.55
HERPUD1-219ENST00000570273 MAGEB6P1A0A0J9YX57 407 aa18.49■□□□□ 0.55
HERPUD1-219ENST00000570273 VIL1P09327 827 aaKnown RBP18.49■□□□□ 0.55
HERPUD1-219ENST00000570273 EIF6P56537 245 aaKnown RBP18.49■□□□□ 0.55
HERPUD1-219ENST00000570273 CXCL9Q07325 125 aa18.49■□□□□ 0.55
HERPUD1-219ENST00000570273 KIAA0825Q8IV33 1275 aa18.49■□□□□ 0.55
HERPUD1-219ENST00000570273 NOL10Q9BSC4 688 aaKnown RBP18.49■□□□□ 0.55
HERPUD1-219ENST00000570273 ARMT1Q9H993 441 aa18.49■□□□□ 0.55
HERPUD1-219ENST00000570273 CCDC88AQ3V6T2 1871 aa18.49■□□□□ 0.55
HERPUD1-219ENST00000570273 TNIP1Q15025 636 aa18.49■□□□□ 0.55
HERPUD1-219ENST00000570273 LCORLQ8N3X6 602 aa18.49■□□□□ 0.55
HERPUD1-219ENST00000570273 FZD9O00144 591 aa18.48■□□□□ 0.55
HERPUD1-219ENST00000570273 SCNN1DP51172 638 aa18.48■□□□□ 0.55
HERPUD1-219ENST00000570273 DYNLL1P63167 89 aaKnown RBP18.48■□□□□ 0.55
HERPUD1-219ENST00000570273 PTH1RQ03431 593 aa18.48■□□□□ 0.55
HERPUD1-219ENST00000570273 USP26Q9BXU7 913 aa18.48■□□□□ 0.55
HERPUD1-219ENST00000570273 RNF181Q9P0P0 153 aa18.48■□□□□ 0.55
HERPUD1-219ENST00000570273 GAKO14976 1311 aa18.47■□□□□ 0.55
HERPUD1-219ENST00000570273 STRBPQ96SI9 672 aaKnown RBP18.47■□□□□ 0.55
HERPUD1-219ENST00000570273 RIOK1Q9BRS2 568 aaKnown RBP18.47■□□□□ 0.55
HERPUD1-219ENST00000570273 C22orf23Q9BZE7 217 aa18.47■□□□□ 0.55
HERPUD1-219ENST00000570273 TSHZ2Q9NRE2 1034 aa18.47■□□□□ 0.55
HERPUD1-219ENST00000570273 AATFQ9NY61 560 aaKnown RBP eCLIP18.47■□□□□ 0.55
HERPUD1-219ENST00000570273 DAGLAQ9Y4D2 1042 aa18.47■□□□□ 0.55
HERPUD1-219ENST00000570273 ZNF541Q9H0D2 1346 aa18.46■□□□□ 0.55
HERPUD1-219ENST00000570273 EPB41L2O43491 1005 aaKnown RBP18.46■□□□□ 0.55
HERPUD1-219ENST00000570273 BAG3O95817 575 aa18.46■□□□□ 0.55
HERPUD1-219ENST00000570273 MCCP23508 829 aa18.46■□□□□ 0.55
HERPUD1-219ENST00000570273 BTDP43251 543 aa18.46■□□□□ 0.55
HERPUD1-219ENST00000570273 VPS53Q5VIR6 699 aa18.46■□□□□ 0.55
HERPUD1-219ENST00000570273 AGBL3Q8NEM8 1001 aa18.46■□□□□ 0.55
HERPUD1-219ENST00000570273 TEKT1Q969V4 418 aa18.46■□□□□ 0.55
HERPUD1-219ENST00000570273 DSCC1Q9BVC3 393 aa18.46■□□□□ 0.55
HERPUD1-219ENST00000570273 ZBTB12Q9Y330 459 aaPredicted RBP18.46■□□□□ 0.55
HERPUD1-219ENST00000570273 HSPD1P10809 573 aaKnown RBP18.45■□□□□ 0.54
HERPUD1-219ENST00000570273 GNAT2P19087 354 aa18.45■□□□□ 0.54
HERPUD1-219ENST00000570273 CRKP46108 304 aa18.45■□□□□ 0.54
HERPUD1-219ENST00000570273 C9orf131Q5VYM1 1079 aa18.45■□□□□ 0.54
HERPUD1-219ENST00000570273 FAM163AQ96GL9 167 aaPredicted RBP18.45■□□□□ 0.54
HERPUD1-219ENST00000570273 TBC1D32Q96NH3 1257 aa18.45■□□□□ 0.54
HERPUD1-219ENST00000570273 GMLQ99445 158 aa18.45■□□□□ 0.54
HERPUD1-219ENST00000570273 RBM8AQ9Y5S9 174 aaKnown RBP18.45■□□□□ 0.54
HERPUD1-219ENST00000570273 GJA3Q9Y6H8 435 aa18.45■□□□□ 0.54
HERPUD1-219ENST00000570273 SLC4A4Q9Y6R1 1079 aa18.45■□□□□ 0.54
HERPUD1-219ENST00000570273 TIAM2Q8IVF5 1701 aa18.44■□□□□ 0.54
HERPUD1-219ENST00000570273 HDLBPQ00341 1268 aaKnown RBP18.44■□□□□ 0.54
HERPUD1-219ENST00000570273 HHIPL2Q6UWX4 724 aa18.44■□□□□ 0.54
HERPUD1-219ENST00000570273 MAP4K1Q92918 833 aa18.44■□□□□ 0.54
HERPUD1-219ENST00000570273 CRNKL1Q9BZJ0 848 aaKnown RBP18.44■□□□□ 0.54
HERPUD1-219ENST00000570273 HDAC9Q9UKV0 1011 aa18.44■□□□□ 0.54
HERPUD1-219ENST00000570273 U3KPZ7 1027 aaPredicted RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms