RNA–Protein interactions for RNA: ENST00000570124.1

SIN3A-215, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-215ENST00000570124 SIX5Q8N196 739 aa6.85□□□□□ -1.31
SIN3A-215ENST00000570124 SNIP1Q8TAD8 396 aaKnown RBP6.85□□□□□ -1.31
SIN3A-215ENST00000570124 ACSBG1Q96GR2 724 aa6.85□□□□□ -1.31
SIN3A-215ENST00000570124 MIS18AQ9NYP9 233 aa6.85□□□□□ -1.31
SIN3A-215ENST00000570124 BRCA1P38398 1863 aaKnown RBP6.84□□□□□ -1.31
SIN3A-215ENST00000570124 TTC24A2A3L6 582 aaPredicted RBP6.84□□□□□ -1.31
SIN3A-215ENST00000570124 KCNQ3O43525 872 aa6.84□□□□□ -1.31
SIN3A-215ENST00000570124 HTATSF1O43719 755 aaKnown RBP6.84□□□□□ -1.31
SIN3A-215ENST00000570124 ZNF853P0CG23 659 aa6.84□□□□□ -1.31
SIN3A-215ENST00000570124 SERPINB4P48594 390 aa6.84□□□□□ -1.31
SIN3A-215ENST00000570124 PDE3BQ13370 1112 aa6.84□□□□□ -1.31
SIN3A-215ENST00000570124 RTF1Q92541 710 aaKnown RBP6.84□□□□□ -1.31
SIN3A-215ENST00000570124 DCAF5Q96JK2 942 aa6.84□□□□□ -1.31
SIN3A-215ENST00000570124 OSBPL3Q9H4L5 887 aa6.84□□□□□ -1.31
SIN3A-215ENST00000570124 PGPEP1Q9NXJ5 209 aa6.84□□□□□ -1.31
SIN3A-215ENST00000570124 KIF13BQ9NQT8 1826 aa6.84□□□□□ -1.31
SIN3A-215ENST00000570124 DLEC1Q9Y238 1755 aa6.84□□□□□ -1.31
SIN3A-215ENST00000570124 MYH13Q9UKX3 1938 aa6.84□□□□□ -1.32
SIN3A-215ENST00000570124 SFI1A8K8P3 1242 aa6.83□□□□□ -1.32
SIN3A-215ENST00000570124 GDF9O60383 454 aa6.83□□□□□ -1.32
SIN3A-215ENST00000570124 DKK1O94907 266 aa6.83□□□□□ -1.32
SIN3A-215ENST00000570124 SEC13P55735 322 aa6.83□□□□□ -1.32
SIN3A-215ENST00000570124 SLFN5Q08AF3 891 aa6.83□□□□□ -1.32
SIN3A-215ENST00000570124 COL19A1Q14993 1142 aa6.83□□□□□ -1.32
SIN3A-215ENST00000570124 KRT24Q2M2I5 525 aa6.83□□□□□ -1.32
SIN3A-215ENST00000570124 WDR63Q8IWG1 891 aa6.83□□□□□ -1.32
SIN3A-215ENST00000570124 ZSCAN29Q8IWY8 852 aaPredicted RBP6.83□□□□□ -1.32
SIN3A-215ENST00000570124 TRMT2AQ8IZ69 625 aaKnown RBP6.83□□□□□ -1.32
SIN3A-215ENST00000570124 CYP4X1Q8N118 509 aa6.83□□□□□ -1.32
SIN3A-215ENST00000570124 TSR2Q969E8 191 aaKnown RBP6.83□□□□□ -1.32
SIN3A-215ENST00000570124 SLC52A2Q9HAB3 445 aa6.83□□□□□ -1.32
SIN3A-215ENST00000570124 LAS1LQ9Y4W2 734 aaKnown RBP6.83□□□□□ -1.32
SIN3A-215ENST00000570124 AK9Q5TCS8 1911 aa6.82□□□□□ -1.32
SIN3A-215ENST00000570124 ERVV-2B6SEH9 535 aa6.82□□□□□ -1.32
SIN3A-215ENST00000570124 J3QL48 77 aa6.82□□□□□ -1.32
SIN3A-215ENST00000570124 SMARCA5O60264 1052 aaPredicted RBP6.82□□□□□ -1.32
SIN3A-215ENST00000570124 LILRA1O75019 489 aa6.82□□□□□ -1.32
SIN3A-215ENST00000570124 HSP90AB1P08238 724 aaKnown RBP6.82□□□□□ -1.32
SIN3A-215ENST00000570124 SLC39A6Q13433 755 aa6.82□□□□□ -1.32
SIN3A-215ENST00000570124 TAF7Q15545 349 aaPredicted RBP6.82□□□□□ -1.32
SIN3A-215ENST00000570124 NAALADL2Q58DX5 795 aa6.82□□□□□ -1.32
SIN3A-215ENST00000570124 PIGBQ92521 554 aa6.82□□□□□ -1.32
SIN3A-215ENST00000570124 MBIPQ9NS73 344 aa6.82□□□□□ -1.32
SIN3A-215ENST00000570124 ASAP1Q9ULH1 1129 aa6.82□□□□□ -1.32
SIN3A-215ENST00000570124 HEG1Q9ULI3 1381 aa6.82□□□□□ -1.32
SIN3A-215ENST00000570124 KIAA1551Q9HCM1 1747 aa6.81□□□□□ -1.32
SIN3A-215ENST00000570124 NRXN2Q9P2S2 1712 aa6.81□□□□□ -1.32
SIN3A-215ENST00000570124 IL16Q14005 1332 aa6.81□□□□□ -1.32
SIN3A-215ENST00000570124 FANCIQ9NVI1 1328 aa6.81□□□□□ -1.32
SIN3A-215ENST00000570124 PRAMEF22A3QJZ6 481 aa6.81□□□□□ -1.32
SIN3A-215ENST00000570124 BTBD11A6QL63 1104 aa6.81□□□□□ -1.32
SIN3A-215ENST00000570124 CHL1O00533 1208 aa6.81□□□□□ -1.32
SIN3A-215ENST00000570124 CABP4P57796 275 aa6.81□□□□□ -1.32
SIN3A-215ENST00000570124 LMOD3Q0VAK6 560 aa6.81□□□□□ -1.32
SIN3A-215ENST00000570124 TEFQ10587 303 aa6.81□□□□□ -1.32
SIN3A-215ENST00000570124 NOM1Q5C9Z4 860 aaKnown RBP6.81□□□□□ -1.32
SIN3A-215ENST00000570124 DUSP27Q5VZP5 1158 aa6.81□□□□□ -1.32
SIN3A-215ENST00000570124 ILDR2Q71H61 639 aa6.81□□□□□ -1.32
SIN3A-215ENST00000570124 CYP2U1Q7Z449 544 aa6.81□□□□□ -1.32
SIN3A-215ENST00000570124 ANKRD13AQ8IZ07 590 aa6.81□□□□□ -1.32
SIN3A-215ENST00000570124 NGEFQ8N5V2 710 aa6.81□□□□□ -1.32
SIN3A-215ENST00000570124 SYTL4Q96C24 671 aaPredicted RBP6.81□□□□□ -1.32
SIN3A-215ENST00000570124 ATG3Q9NT62 314 aa6.81□□□□□ -1.32
SIN3A-215ENST00000570124 COL11A2P13942 1736 aaPredicted RBP6.81□□□□□ -1.32
SIN3A-215ENST00000570124 TRIM37O94972 964 aa6.8□□□□□ -1.32
SIN3A-215ENST00000570124 STAU1O95793 577 aaKnown RBP6.8□□□□□ -1.32
SIN3A-215ENST00000570124 ADD1P35611 737 aaKnown RBP6.8□□□□□ -1.32
SIN3A-215ENST00000570124 GNAI1P63096 354 aa6.8□□□□□ -1.32
SIN3A-215ENST00000570124 EXOSC9Q06265 439 aaKnown RBP6.8□□□□□ -1.32
SIN3A-215ENST00000570124 FAM196AQ6ZSG2 479 aa6.8□□□□□ -1.32
SIN3A-215ENST00000570124 TRIM67Q6ZTA4 783 aa6.8□□□□□ -1.32
SIN3A-215ENST00000570124 TSPYL6Q8N831 410 aa6.8□□□□□ -1.32
SIN3A-215ENST00000570124 C8orf58Q8NAV2 365 aa6.8□□□□□ -1.32
SIN3A-215ENST00000570124 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.8□□□□□ -1.32
SIN3A-215ENST00000570124 SLC4A9Q96Q91 983 aa6.8□□□□□ -1.32
SIN3A-215ENST00000570124 CHMP4AQ9BY43 222 aa6.8□□□□□ -1.32
SIN3A-215ENST00000570124 IFT57Q9NWB7 429 aa6.8□□□□□ -1.32
SIN3A-215ENST00000570124 TOR4AQ9NXH8 423 aa6.8□□□□□ -1.32
SIN3A-215ENST00000570124 TMOD3Q9NYL9 352 aa6.8□□□□□ -1.32
SIN3A-215ENST00000570124 PPP1R1BQ9UD71 204 aaPredicted RBP6.8□□□□□ -1.32
SIN3A-215ENST00000570124 TSPYL4Q9UJ04 414 aa6.8□□□□□ -1.32
SIN3A-215ENST00000570124 MYO5AQ9Y4I1 1855 aaKnown RBP6.79□□□□□ -1.32
SIN3A-215ENST00000570124 TMEM229AB2RXF0 380 aa6.79□□□□□ -1.32
SIN3A-215ENST00000570124 ZIC2O95409 532 aaPredicted RBP6.79□□□□□ -1.32
SIN3A-215ENST00000570124 RECKO95980 971 aa6.79□□□□□ -1.32
SIN3A-215ENST00000570124 SCNN1DP51172 638 aa6.79□□□□□ -1.32
SIN3A-215ENST00000570124 GDF10P55107 478 aa6.79□□□□□ -1.32
SIN3A-215ENST00000570124 KCNQ4P56696 695 aa6.79□□□□□ -1.32
SIN3A-215ENST00000570124 WDR4P57081 412 aaKnown RBP6.79□□□□□ -1.32
SIN3A-215ENST00000570124 EIF4A1P60842 406 aaKnown RBP6.79□□□□□ -1.32
SIN3A-215ENST00000570124 PRR20EP86478 221 aa6.79□□□□□ -1.32
SIN3A-215ENST00000570124 PRR20CP86479 221 aa6.79□□□□□ -1.32
SIN3A-215ENST00000570124 PRR20DP86480 221 aa6.79□□□□□ -1.32
SIN3A-215ENST00000570124 PRR20BP86481 221 aa6.79□□□□□ -1.32
SIN3A-215ENST00000570124 PRR20AP86496 221 aa6.79□□□□□ -1.32
SIN3A-215ENST00000570124 FGD1P98174 961 aa6.79□□□□□ -1.32
SIN3A-215ENST00000570124 ZNF790Q6PG37 636 aa6.79□□□□□ -1.32
SIN3A-215ENST00000570124 GLYCTKQ8IVS8 523 aa6.79□□□□□ -1.32
SIN3A-215ENST00000570124 ITPKCQ96DU7 683 aa6.79□□□□□ -1.32
SIN3A-215ENST00000570124 ZNF496Q96IT1 587 aaPredicted RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms