RNA–Protein interactions for RNA: ENST00000569899.5

GDE1-205, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 4

Gene GDE1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-205ENST00000569899 FPGT-TNNI3KV9GXZ4 949 aa12.26□□□□□ -0.45
GDE1-205ENST00000569899 LRRC37AA6NMS7 1700 aa12.25□□□□□ -0.45
GDE1-205ENST00000569899 IFIT2P09913 472 aaKnown RBP12.25□□□□□ -0.45
GDE1-205ENST00000569899 TMEM132AQ24JP5 1023 aa12.25□□□□□ -0.45
GDE1-205ENST00000569899 LDHAL6AQ6ZMR3 332 aa12.25□□□□□ -0.45
GDE1-205ENST00000569899 CCDC8Q9H0W5 538 aaPredicted RBP12.25□□□□□ -0.45
GDE1-205ENST00000569899 CNNM1Q9NRU3 951 aa12.25□□□□□ -0.45
GDE1-205ENST00000569899 STAP2Q9UGK3 403 aa12.25□□□□□ -0.45
GDE1-205ENST00000569899 AOX1Q06278 1338 aa12.25□□□□□ -0.45
GDE1-205ENST00000569899 ST5P78524 1137 aa12.24□□□□□ -0.45
GDE1-205ENST00000569899 NLGN1Q8N2Q7 840 aa12.24□□□□□ -0.45
GDE1-205ENST00000569899 PI4K2BQ8TCG2 481 aa12.24□□□□□ -0.45
GDE1-205ENST00000569899 NLRP3Q96P20 1036 aa12.24□□□□□ -0.45
GDE1-205ENST00000569899 BACH2Q9BYV9 841 aa12.24□□□□□ -0.45
GDE1-205ENST00000569899 PDGFDQ9GZP0 370 aaPredicted RBP12.24□□□□□ -0.45
GDE1-205ENST00000569899 RIPOR2Q9Y4F9 1068 aa12.24□□□□□ -0.45
GDE1-205ENST00000569899 MMP10P09238 476 aa12.23□□□□□ -0.45
GDE1-205ENST00000569899 GCGRP47871 477 aa12.23□□□□□ -0.45
GDE1-205ENST00000569899 METTL24Q5JXM2 366 aa12.23□□□□□ -0.45
GDE1-205ENST00000569899 THSD4Q6ZMP0 1018 aa12.23□□□□□ -0.45
GDE1-205ENST00000569899 CDC5LQ99459 802 aaKnown RBP12.23□□□□□ -0.45
GDE1-205ENST00000569899 DBNLQ9UJU6 430 aaKnown RBP12.23□□□□□ -0.45
GDE1-205ENST00000569899 HPS5Q9UPZ3 1129 aa12.23□□□□□ -0.45
GDE1-205ENST00000569899 IGHMBP2P38935 993 aaKnown RBP12.22□□□□□ -0.45
GDE1-205ENST00000569899 SPNS2Q8IVW8 549 aa12.22□□□□□ -0.45
GDE1-205ENST00000569899 VGLL2Q8N8G2 317 aa12.22□□□□□ -0.45
GDE1-205ENST00000569899 CELF1Q92879 486 aaKnown RBP12.22□□□□□ -0.45
GDE1-205ENST00000569899 MPHOSPH8Q99549 860 aa12.22□□□□□ -0.45
GDE1-205ENST00000569899 DBNDD2Q9BQY9 259 aa12.22□□□□□ -0.45
GDE1-205ENST00000569899 CEP126Q9P2H0 1117 aa12.22□□□□□ -0.45
GDE1-205ENST00000569899 TTC41PQ6P2S7 1318 aa12.22□□□□□ -0.45
GDE1-205ENST00000569899 MYH13Q9UKX3 1938 aa12.22□□□□□ -0.45
GDE1-205ENST00000569899 DLEC1Q9Y238 1755 aa12.22□□□□□ -0.45
GDE1-205ENST00000569899 AKAP11Q9UKA4 1901 aa12.22□□□□□ -0.45
GDE1-205ENST00000569899 A0A1B0GUL7 405 aa12.22□□□□□ -0.45
GDE1-205ENST00000569899 CFHP08603 1231 aa12.22□□□□□ -0.45
GDE1-205ENST00000569899 SDSP20132 328 aa12.22□□□□□ -0.45
GDE1-205ENST00000569899 ANKRD18AQ8IVF6 992 aa12.22□□□□□ -0.45
GDE1-205ENST00000569899 GPATCH3Q96I76 525 aa12.22□□□□□ -0.45
GDE1-205ENST00000569899 GPR108Q9NPR9 543 aa12.22□□□□□ -0.45
GDE1-205ENST00000569899 ECHDC1Q9NTX5 307 aa12.22□□□□□ -0.45
GDE1-205ENST00000569899 MYH7P12883 1935 aa12.21□□□□□ -0.45
GDE1-205ENST00000569899 TSR3Q9UJK0 312 aaKnown RBP12.21□□□□□ -0.46
GDE1-205ENST00000569899 PARP3Q9Y6F1 533 aa12.21□□□□□ -0.46
GDE1-205ENST00000569899 MYO5AQ9Y4I1 1855 aaKnown RBP12.2□□□□□ -0.46
GDE1-205ENST00000569899 KIF13BQ9NQT8 1826 aa12.2□□□□□ -0.46
GDE1-205ENST00000569899 LTBP1Q14766 1721 aa12.2□□□□□ -0.46
GDE1-205ENST00000569899 MROH5Q6ZUA9 1318 aa12.2□□□□□ -0.46
GDE1-205ENST00000569899 MAP4K4O95819 1239 aaPredicted RBP12.2□□□□□ -0.46
GDE1-205ENST00000569899 PPP4CP60510 307 aa12.2□□□□□ -0.46
GDE1-205ENST00000569899 TIMM10P62072 90 aa12.2□□□□□ -0.46
GDE1-205ENST00000569899 HELBQ8NG08 1087 aaPredicted RBP12.2□□□□□ -0.46
GDE1-205ENST00000569899 NEUROD6Q96NK8 337 aa12.2□□□□□ -0.46
GDE1-205ENST00000569899 TBC1D2Q9BYX2 928 aa12.2□□□□□ -0.46
GDE1-205ENST00000569899 ERC2O15083 957 aa12.19□□□□□ -0.46
GDE1-205ENST00000569899 GLRX3O76003 335 aaKnown RBP12.19□□□□□ -0.46
GDE1-205ENST00000569899 ADORA1P30542 326 aa12.19□□□□□ -0.46
GDE1-205ENST00000569899 CHRNDQ07001 517 aa12.19□□□□□ -0.46
GDE1-205ENST00000569899 ATP2B3Q16720 1220 aa12.19□□□□□ -0.46
GDE1-205ENST00000569899 CRY2Q49AN0 593 aa12.19□□□□□ -0.46
GDE1-205ENST00000569899 DDX46Q7L014 1031 aaKnown RBP12.19□□□□□ -0.46
GDE1-205ENST00000569899 SLC51AQ86UW1 340 aa12.19□□□□□ -0.46
GDE1-205ENST00000569899 SPIRE2Q8WWL2 714 aa12.19□□□□□ -0.46
GDE1-205ENST00000569899 CDC45O75419 566 aa12.19□□□□□ -0.46
GDE1-205ENST00000569899 TAF5LO75529 589 aa12.19□□□□□ -0.46
GDE1-205ENST00000569899 PDE8BO95263 885 aa12.19□□□□□ -0.46
GDE1-205ENST00000569899 TBC1D9Q6ZT07 1266 aa12.19□□□□□ -0.46
GDE1-205ENST00000569899 RPGRQ92834 1020 aaKnown RBP12.19□□□□□ -0.46
GDE1-205ENST00000569899 WBP1LQ9NX94 342 aa12.19□□□□□ -0.46
GDE1-205ENST00000569899 AKAP2Q9Y2D5 859 aa12.19□□□□□ -0.46
GDE1-205ENST00000569899 KIAA1551Q9HCM1 1747 aa12.18□□□□□ -0.46
GDE1-205ENST00000569899 DOCK2Q92608 1830 aa12.18□□□□□ -0.46
GDE1-205ENST00000569899 SNAP23O00161 211 aa12.18□□□□□ -0.46
GDE1-205ENST00000569899 KDM4AO75164 1064 aa12.18□□□□□ -0.46
GDE1-205ENST00000569899 GRAPQ13588 217 aa12.18□□□□□ -0.46
GDE1-205ENST00000569899 PUM3Q15397 648 aaKnown RBP12.18□□□□□ -0.46
GDE1-205ENST00000569899 GRAPLQ8TC17 118 aaPredicted RBP12.18□□□□□ -0.46
GDE1-205ENST00000569899 RILPL2Q969X0 211 aa12.18□□□□□ -0.46
GDE1-205ENST00000569899 XAGE2Q96GT9 111 aa12.18□□□□□ -0.46
GDE1-205ENST00000569899 BSDC1Q9NW68 430 aaPredicted RBP12.18□□□□□ -0.46
GDE1-205ENST00000569899 C10orf71Q711Q0 1435 aa12.17□□□□□ -0.46
GDE1-205ENST00000569899 FGFR2P21802 821 aa12.17□□□□□ -0.46
GDE1-205ENST00000569899 RPS8P62241 208 aaKnown RBP12.17□□□□□ -0.46
GDE1-205ENST00000569899 BRIP1Q9BX63 1249 aa12.17□□□□□ -0.46
GDE1-205ENST00000569899 BOLA2Q9H3K6 86 aa12.17□□□□□ -0.46
GDE1-205ENST00000569899 KLRG2A4D1S0 409 aaPredicted RBP12.16□□□□□ -0.46
GDE1-205ENST00000569899 ATP5JP18859 108 aa12.16□□□□□ -0.46
GDE1-205ENST00000569899 CNTROBQ8N137 903 aa12.16□□□□□ -0.46
GDE1-205ENST00000569899 MINPP1Q9UNW1 487 aa12.16□□□□□ -0.46
GDE1-205ENST00000569899 NDUFB9Q9Y6M9 179 aa12.16□□□□□ -0.46
GDE1-205ENST00000569899 SLX4Q8IY92 1834 aa12.16□□□□□ -0.46
GDE1-205ENST00000569899 SLC5A1P13866 664 aa12.15□□□□□ -0.46
GDE1-205ENST00000569899 MYSM1Q5VVJ2 828 aa12.15□□□□□ -0.46
GDE1-205ENST00000569899 LPIN2Q92539 896 aa12.15□□□□□ -0.46
GDE1-205ENST00000569899 EDC3Q96F86 508 aaKnown RBP12.15□□□□□ -0.46
GDE1-205ENST00000569899 RBM17Q96I25 401 aaKnown RBP12.15□□□□□ -0.46
GDE1-205ENST00000569899 WTIPA6NIX2 430 aaPredicted RBP12.15□□□□□ -0.47
GDE1-205ENST00000569899 HOXA10P31260 410 aaPredicted RBP12.15□□□□□ -0.47
GDE1-205ENST00000569899 APLP1P51693 650 aa12.15□□□□□ -0.47
GDE1-205ENST00000569899 MFAP1P55081 439 aaKnown RBP12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms