RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820	TRIM5	Q9C035	493 aa		13.99	□□□□□ -0.17
SPG7-222	ENST00000569820	NUP62CL	Q9H1M0	184 aa		13.99	□□□□□ -0.17
SPG7-222	ENST00000569820	NRBP1	Q9UHY1	535 aa		13.99	□□□□□ -0.17
SPG7-222	ENST00000569820	RPS6KA4	O75676	772 aa		13.99	□□□□□ -0.17
SPG7-222	ENST00000569820	SCARF1	Q14162	830 aa		13.99	□□□□□ -0.17
SPG7-222	ENST00000569820	ADCK5	Q3MIX3	580 aa		13.99	□□□□□ -0.17
SPG7-222	ENST00000569820	TTC39A	Q5SRH9	613 aa		13.99	□□□□□ -0.17
SPG7-222	ENST00000569820	CREBRF	Q8IUR6	639 aa		13.99	□□□□□ -0.17
SPG7-222	ENST00000569820	ERICH4	A6NGS2	130 aa		13.98	□□□□□ -0.17
SPG7-222	ENST00000569820	SLC27A2	O14975	620 aa		13.98	□□□□□ -0.17
SPG7-222	ENST00000569820	PDE8B	O95263	885 aa		13.98	□□□□□ -0.17
SPG7-222	ENST00000569820	TAF1	P21675	1872 aa		13.98	□□□□□ -0.17
SPG7-222	ENST00000569820	ZNF75D	P51815	510 aa		13.98	□□□□□ -0.17
SPG7-222	ENST00000569820	GORAB	Q5T7V8	394 aa		13.98	□□□□□ -0.17
SPG7-222	ENST00000569820	CCDC129	Q6ZRS4	1044 aa		13.98	□□□□□ -0.17
SPG7-222	ENST00000569820	TM6SF1	Q9BZW5	370 aa		13.98	□□□□□ -0.17
SPG7-222	ENST00000569820	SEC31B	Q9NQW1	1179 aa		13.98	□□□□□ -0.17
SPG7-222	ENST00000569820	MYO5A	Q9Y4I1	1855 aa	Known RBP	13.98	□□□□□ -0.17
SPG7-222	ENST00000569820	MROH5	Q6ZUA9	1318 aa		13.98	□□□□□ -0.17
SPG7-222	ENST00000569820	GNPAT	O15228	680 aa		13.98	□□□□□ -0.17
SPG7-222	ENST00000569820	CAST	P20810	708 aa	Known RBP	13.98	□□□□□ -0.17
SPG7-222	ENST00000569820	SLFNL1	Q499Z3	407 aa		13.98	□□□□□ -0.17
SPG7-222	ENST00000569820	CCDC152	Q4G0S7	254 aa		13.98	□□□□□ -0.17
SPG7-222	ENST00000569820	MCMDC2	Q4G0Z9	681 aa		13.98	□□□□□ -0.17
SPG7-222	ENST00000569820	USPL1	Q5W0Q7	1092 aa		13.98	□□□□□ -0.17
SPG7-222	ENST00000569820	RUFY3	Q7L099	469 aa		13.98	□□□□□ -0.17
SPG7-222	ENST00000569820	AMIGO3	Q86WK7	504 aa		13.98	□□□□□ -0.17
SPG7-222	ENST00000569820	PLA2G4D	Q86XP0	818 aa		13.98	□□□□□ -0.17
SPG7-222	ENST00000569820	HOMEZ	Q8IX15	550 aa		13.98	□□□□□ -0.17
SPG7-222	ENST00000569820	LARP6	Q9BRS8	491 aa	Known RBP	13.98	□□□□□ -0.17
SPG7-222	ENST00000569820	CBX8	Q9HC52	389 aa		13.98	□□□□□ -0.17
SPG7-222	ENST00000569820	MTMR6	Q9Y217	621 aa		13.98	□□□□□ -0.17
SPG7-222	ENST00000569820	EP400	Q96L91	3159 aa		13.98	□□□□□ -0.17
SPG7-222	ENST00000569820	HSP90B1	P14625	803 aa	Known RBP	13.97	□□□□□ -0.17
SPG7-222	ENST00000569820	CPA1	P15085	419 aa		13.97	□□□□□ -0.17
SPG7-222	ENST00000569820	JAKMIP1	Q96N16	626 aa	Known RBP	13.97	□□□□□ -0.17
SPG7-222	ENST00000569820	ZSWIM6	Q9HCJ5	1215 aa		13.97	□□□□□ -0.17
SPG7-222	ENST00000569820	NARF	Q9UHQ1	456 aa		13.97	□□□□□ -0.17
SPG7-222	ENST00000569820	UBR3	Q6ZT12	1888 aa		13.97	□□□□□ -0.17
SPG7-222	ENST00000569820	ZKSCAN1	P17029	563 aa	Predicted RBP	13.97	□□□□□ -0.17
SPG7-222	ENST00000569820	FGFR2	P21802	821 aa		13.97	□□□□□ -0.17
SPG7-222	ENST00000569820	GJB2	P29033	226 aa		13.97	□□□□□ -0.17
SPG7-222	ENST00000569820	CAMK4	Q16566	473 aa		13.97	□□□□□ -0.17
SPG7-222	ENST00000569820	ANO6	Q4KMQ2	910 aa		13.97	□□□□□ -0.17
SPG7-222	ENST00000569820	ZMYM1	Q5SVZ6	1142 aa		13.97	□□□□□ -0.17
SPG7-222	ENST00000569820	TBC1D9B	Q66K14	1250 aa		13.97	□□□□□ -0.17
SPG7-222	ENST00000569820	FAM53C	Q9NYF3	392 aa		13.97	□□□□□ -0.17
SPG7-222	ENST00000569820	ZNF215	Q9UL58	517 aa	Predicted RBP	13.97	□□□□□ -0.17
SPG7-222	ENST00000569820	TAF6L	Q9Y6J9	622 aa		13.97	□□□□□ -0.17
SPG7-222	ENST00000569820	LAMA4	Q16363	1823 aa		13.96	□□□□□ -0.17
SPG7-222	ENST00000569820	DOCK2	Q92608	1830 aa		13.96	□□□□□ -0.17
SPG7-222	ENST00000569820	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
SPG7-222	ENST00000569820	ERFE	Q4G0M1	354 aa		13.96	□□□□□ -0.17
SPG7-222	ENST00000569820	CACTIN	Q8WUQ7	758 aa	Known RBP	13.96	□□□□□ -0.17
SPG7-222	ENST00000569820	ZNF512B	Q96KM6	892 aa	Predicted RBP	13.96	□□□□□ -0.17
SPG7-222	ENST00000569820	QTRT2	Q9H974	415 aa	Known RBP	13.96	□□□□□ -0.17
SPG7-222	ENST00000569820	HELLS	Q9NRZ9	838 aa		13.96	□□□□□ -0.17
SPG7-222	ENST00000569820	CLIP2	Q9UDT6	1046 aa		13.96	□□□□□ -0.17
SPG7-222	ENST00000569820	SRP68	Q9UHB9	627 aa	Known RBP	13.96	□□□□□ -0.17
SPG7-222	ENST00000569820	VPS37C	A5D8V6	355 aa	Predicted RBP	13.96	□□□□□ -0.18
SPG7-222	ENST00000569820	MCAM	P43121	646 aa		13.96	□□□□□ -0.18
SPG7-222	ENST00000569820	PUM3	Q15397	648 aa	Known RBP	13.96	□□□□□ -0.18
SPG7-222	ENST00000569820	PI16	Q6UXB8	463 aa		13.96	□□□□□ -0.18
SPG7-222	ENST00000569820	TNMD	Q9H2S6	317 aa		13.96	□□□□□ -0.18
SPG7-222	ENST00000569820	MAST3	O60307	1309 aa		13.95	□□□□□ -0.18
SPG7-222	ENST00000569820	RNF113A	O15541	343 aa	Known RBP	13.95	□□□□□ -0.18
SPG7-222	ENST00000569820	MYCN	P04198	464 aa	Predicted RBP	13.95	□□□□□ -0.18
SPG7-222	ENST00000569820	ZAP70	P43403	619 aa		13.95	□□□□□ -0.18
SPG7-222	ENST00000569820	COL9A3	Q14050	684 aa	Predicted RBP	13.95	□□□□□ -0.18
SPG7-222	ENST00000569820	RNF20	Q5VTR2	975 aa		13.95	□□□□□ -0.18
SPG7-222	ENST00000569820	FBXO38	Q6PIJ6	1188 aa		13.95	□□□□□ -0.18
SPG7-222	ENST00000569820	C3orf67	Q6ZVT6	689 aa		13.95	□□□□□ -0.18
SPG7-222	ENST00000569820	CCDC83	Q8IWF9	413 aa		13.95	□□□□□ -0.18
SPG7-222	ENST00000569820	CKAP2L	Q8IYA6	745 aa		13.95	□□□□□ -0.18
SPG7-222	ENST00000569820	HELB	Q8NG08	1087 aa	Predicted RBP	13.95	□□□□□ -0.18
SPG7-222	ENST00000569820	HMG20B	Q9P0W2	317 aa		13.95	□□□□□ -0.18
SPG7-222	ENST00000569820	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	13.95	□□□□□ -0.18	3e-6	■□□□□ 9.3
SPG7-222	ENST00000569820	FEZ2	Q9UHY8	353 aa	Predicted RBP	13.95	□□□□□ -0.18
SPG7-222	ENST00000569820		V9GYY5	206 aa	Predicted RBP	13.95	□□□□□ -0.18
SPG7-222	ENST00000569820	LIG1	P18858	919 aa		13.95	□□□□□ -0.18
SPG7-222	ENST00000569820	KRT85	P78386	507 aa		13.95	□□□□□ -0.18
SPG7-222	ENST00000569820	TSGA10IP	Q3SY00	556 aa		13.95	□□□□□ -0.18
SPG7-222	ENST00000569820	VPS53	Q5VIR6	699 aa		13.95	□□□□□ -0.18
SPG7-222	ENST00000569820	TDRD7	Q8NHU6	1098 aa	Known RBP	13.95	□□□□□ -0.18
SPG7-222	ENST00000569820	CNKSR2	Q8WXI2	1034 aa		13.95	□□□□□ -0.18
SPG7-222	ENST00000569820	LPIN2	Q92539	896 aa		13.95	□□□□□ -0.18
SPG7-222	ENST00000569820	ERO1A	Q96HE7	468 aa		13.95	□□□□□ -0.18
SPG7-222	ENST00000569820	MPHOSPH8	Q99549	860 aa		13.95	□□□□□ -0.18
SPG7-222	ENST00000569820	RTCB	Q9Y3I0	505 aa	Known RBP	13.95	□□□□□ -0.18
SPG7-222	ENST00000569820	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.94	□□□□□ -0.18
SPG7-222	ENST00000569820	LARGE1	O95461	756 aa		13.94	□□□□□ -0.18
SPG7-222	ENST00000569820	RBM6	P78332	1123 aa	Known RBP	13.94	□□□□□ -0.18
SPG7-222	ENST00000569820	PTPN14	Q15678	1187 aa		13.94	□□□□□ -0.18
SPG7-222	ENST00000569820	ELF2	Q15723	593 aa		13.94	□□□□□ -0.18
SPG7-222	ENST00000569820	BICDL1	Q6ZP65	573 aa		13.94	□□□□□ -0.18
SPG7-222	ENST00000569820	TTC6	Q86TZ1	520 aa		13.94	□□□□□ -0.18
SPG7-222	ENST00000569820	CYP46A1	Q9Y6A2	500 aa		13.94	□□□□□ -0.18
SPG7-222	ENST00000569820	ARID4A	P29374	1257 aa	Predicted RBP	13.93	□□□□□ -0.18
SPG7-222	ENST00000569820	PHKA1	P46020	1223 aa		13.93	□□□□□ -0.18
SPG7-222	ENST00000569820	CCDC102B	Q68D86	513 aa		13.93	□□□□□ -0.18

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