RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 CHMP5Q9NZZ3 219 aa13.03□□□□□ -0.32
PDXDC1-216ENST00000569715 ZNF804AQ7Z570 1209 aa13.03□□□□□ -0.32
PDXDC1-216ENST00000569715 TDRD7Q8NHU6 1098 aaKnown RBP13.03□□□□□ -0.32
PDXDC1-216ENST00000569715 E7EWF7 191 aa13.02□□□□□ -0.32
PDXDC1-216ENST00000569715 C6orf229H3BNL8 230 aa13.02□□□□□ -0.32
PDXDC1-216ENST00000569715 CUL4AQ13619 759 aa13.02□□□□□ -0.32
PDXDC1-216ENST00000569715 KRT32Q14532 448 aa13.02□□□□□ -0.32
PDXDC1-216ENST00000569715 NBPF3Q9H094 633 aa13.02□□□□□ -0.32
PDXDC1-216ENST00000569715 APPP05067 770 aa13.02□□□□□ -0.33
PDXDC1-216ENST00000569715 TMC4Q7Z404 712 aa13.02□□□□□ -0.33
PDXDC1-216ENST00000569715 ALDH1B1P30837 517 aa13.02□□□□□ -0.33
PDXDC1-216ENST00000569715 MECOMQ03112 1051 aa13.02□□□□□ -0.33
PDXDC1-216ENST00000569715 GRIK5Q16478 980 aa13.02□□□□□ -0.33
PDXDC1-216ENST00000569715 NSUN4Q96CB9 384 aaKnown RBP13.02□□□□□ -0.33
PDXDC1-216ENST00000569715 LRRC2Q9BYS8 371 aa13.02□□□□□ -0.33
PDXDC1-216ENST00000569715 DTNBO60941 627 aa13.01□□□□□ -0.33
PDXDC1-216ENST00000569715 TOB2Q14106 344 aaPredicted RBP13.01□□□□□ -0.33
PDXDC1-216ENST00000569715 CD209Q9NNX6 404 aa13.01□□□□□ -0.33
PDXDC1-216ENST00000569715 LIMCH1Q9UPQ0 1083 aa13.01□□□□□ -0.33
PDXDC1-216ENST00000569715 NAA16Q6N069 864 aaPredicted RBP13.01□□□□□ -0.33
PDXDC1-216ENST00000569715 CTNNA3Q9UI47 895 aa13.01□□□□□ -0.33
PDXDC1-216ENST00000569715 H0YIN7 160 aa13.01□□□□□ -0.33
PDXDC1-216ENST00000569715 DYNLL1P63167 89 aaKnown RBP13.01□□□□□ -0.33
PDXDC1-216ENST00000569715 NFKBIBQ15653 356 aa13.01□□□□□ -0.33
PDXDC1-216ENST00000569715 IMMTQ16891 758 aaKnown RBP13.01□□□□□ -0.33
PDXDC1-216ENST00000569715 TPCN1Q9ULQ1 816 aa13.01□□□□□ -0.33
PDXDC1-216ENST00000569715 C10orf71Q711Q0 1435 aa13□□□□□ -0.33
PDXDC1-216ENST00000569715 GSG1L2A8MUP6 293 aa13□□□□□ -0.33
PDXDC1-216ENST00000569715 RIMBP2O15034 1052 aa13□□□□□ -0.33
PDXDC1-216ENST00000569715 PKP1Q13835 747 aa13□□□□□ -0.33
PDXDC1-216ENST00000569715 ZNF219Q9P2Y4 722 aaPredicted RBP13□□□□□ -0.33
PDXDC1-216ENST00000569715 BAZ2AQ9UIF9 1905 aaKnown RBP13□□□□□ -0.33
PDXDC1-216ENST00000569715 KIAA1551Q9HCM1 1747 aa13□□□□□ -0.33
PDXDC1-216ENST00000569715 ST3GAL1Q11201 340 aa13□□□□□ -0.33
PDXDC1-216ENST00000569715 TBC1D10CQ8IV04 446 aa13□□□□□ -0.33
PDXDC1-216ENST00000569715 NKX2-3Q8TAU0 364 aa13□□□□□ -0.33
PDXDC1-216ENST00000569715 RIOK1Q9BRS2 568 aaKnown RBP13□□□□□ -0.33
PDXDC1-216ENST00000569715 ME3Q16798 604 aa13□□□□□ -0.33
PDXDC1-216ENST00000569715 MPNDQ8N594 471 aa13□□□□□ -0.33
PDXDC1-216ENST00000569715 SLC4A4Q9Y6R1 1079 aa13□□□□□ -0.33
PDXDC1-216ENST00000569715 DLEC1Q9Y238 1755 aa13□□□□□ -0.33
PDXDC1-216ENST00000569715 MAGEB6P1A0A0J9YX57 407 aa12.99□□□□□ -0.33
PDXDC1-216ENST00000569715 PATL2C9JE40 543 aaKnown RBP12.99□□□□□ -0.33
PDXDC1-216ENST00000569715 IL1R1P14778 569 aa12.99□□□□□ -0.33
PDXDC1-216ENST00000569715 STYK1Q6J9G0 422 aa12.99□□□□□ -0.33
PDXDC1-216ENST00000569715 CHST3Q7LGC8 479 aa12.99□□□□□ -0.33
PDXDC1-216ENST00000569715 IFNL3Q8IZI9 196 aa12.99□□□□□ -0.33
PDXDC1-216ENST00000569715 SDR42E1Q8WUS8 393 aa12.99□□□□□ -0.33
PDXDC1-216ENST00000569715 ZBTB22O15209 634 aa12.99□□□□□ -0.33
PDXDC1-216ENST00000569715 DPP8Q6V1X1 898 aaPredicted RBP12.99□□□□□ -0.33
PDXDC1-216ENST00000569715 CIZ1Q9ULV3 898 aaPredicted RBP12.99□□□□□ -0.33
PDXDC1-216ENST00000569715 SALL1Q9NSC2 1324 aa12.99□□□□□ -0.33
PDXDC1-216ENST00000569715 ZNF213O14771 459 aa12.99□□□□□ -0.33
PDXDC1-216ENST00000569715 Q6ZUG5 572 aa12.99□□□□□ -0.33
PDXDC1-216ENST00000569715 IL27Q8NEV9 243 aa12.99□□□□□ -0.33
PDXDC1-216ENST00000569715 NECAB1Q8N987 351 aa12.98□□□□□ -0.33
PDXDC1-216ENST00000569715 ZBTB7AO95365 584 aa12.98□□□□□ -0.33
PDXDC1-216ENST00000569715 CCDC125Q86Z20 511 aa12.98□□□□□ -0.33
PDXDC1-216ENST00000569715 WDR66Q8TBY9 1149 aa12.98□□□□□ -0.33
PDXDC1-216ENST00000569715 ALDH8A1Q9H2A2 487 aaPredicted RBP12.98□□□□□ -0.33
PDXDC1-216ENST00000569715 MYH2Q9UKX2 1941 aa12.98□□□□□ -0.33
PDXDC1-216ENST00000569715 EXOSC10Q01780 885 aaKnown RBP12.98□□□□□ -0.33
PDXDC1-216ENST00000569715 ALX1Q15699 326 aa12.98□□□□□ -0.33
PDXDC1-216ENST00000569715 DHX32Q7L7V1 743 aaKnown RBP12.98□□□□□ -0.33
PDXDC1-216ENST00000569715 TIAM2Q8IVF5 1701 aa12.98□□□□□ -0.33
PDXDC1-216ENST00000569715 CCDC83Q8IWF9 413 aa12.98□□□□□ -0.33
PDXDC1-216ENST00000569715 NAPBQ9H115 298 aa12.98□□□□□ -0.33
PDXDC1-216ENST00000569715 INCENPQ9NQS7 918 aa12.98□□□□□ -0.33
PDXDC1-216ENST00000569715 AATFQ9NY61 560 aaKnown RBP eCLIP12.98□□□□□ -0.33
PDXDC1-216ENST00000569715 TACC3Q9Y6A5 838 aa12.98□□□□□ -0.33
PDXDC1-216ENST00000569715 SMIM22K7EJ46 135 aa12.97□□□□□ -0.33
PDXDC1-216ENST00000569715 RAB3GAP1Q15042 981 aa12.97□□□□□ -0.33
PDXDC1-216ENST00000569715 DIXDC1Q155Q3 683 aa12.97□□□□□ -0.33
PDXDC1-216ENST00000569715 DZIP1Q86YF9 867 aaKnown RBP12.97□□□□□ -0.33
PDXDC1-216ENST00000569715 INTS4Q96HW7 963 aaKnown RBP12.97□□□□□ -0.33
PDXDC1-216ENST00000569715 ZMYM6O95789 1325 aa12.97□□□□□ -0.33
PDXDC1-216ENST00000569715 LDHBP07195 334 aaKnown RBP12.97□□□□□ -0.33
PDXDC1-216ENST00000569715 CTDSPL2Q05D32 466 aa12.97□□□□□ -0.33
PDXDC1-216ENST00000569715 GPHNQ9NQX3 736 aaPredicted RBP12.97□□□□□ -0.33
PDXDC1-216ENST00000569715 DOK7Q18PE1 504 aa12.97□□□□□ -0.33
PDXDC1-216ENST00000569715 MB21D2Q8IYB1 491 aaPredicted RBP12.97□□□□□ -0.33
PDXDC1-216ENST00000569715 BRF1Q92994 677 aa12.97□□□□□ -0.33
PDXDC1-216ENST00000569715 NEDD4P46934 1319 aa12.96□□□□□ -0.33
PDXDC1-216ENST00000569715 KIF13BQ9NQT8 1826 aa12.96□□□□□ -0.33
PDXDC1-216ENST00000569715 GNAT2P19087 354 aa12.96□□□□□ -0.33
PDXDC1-216ENST00000569715 TDO2P48775 406 aa12.96□□□□□ -0.33
PDXDC1-216ENST00000569715 TNPO1Q92973 898 aaKnown RBP12.96□□□□□ -0.33
PDXDC1-216ENST00000569715 HMGB1P09429 215 aaKnown RBP12.96□□□□□ -0.33
PDXDC1-216ENST00000569715 ANTXR2P58335 489 aa12.96□□□□□ -0.33
PDXDC1-216ENST00000569715 STK3Q13188 491 aa12.96□□□□□ -0.33
PDXDC1-216ENST00000569715 SLC16A10Q8TF71 515 aa12.96□□□□□ -0.33
PDXDC1-216ENST00000569715 CWC22Q9HCG8 908 aaKnown RBP12.96□□□□□ -0.33
PDXDC1-216ENST00000569715 SNED1Q8TER0 1413 aa12.96□□□□□ -0.34
PDXDC1-216ENST00000569715 ANKRD1Q15327 319 aa12.96□□□□□ -0.34
PDXDC1-216ENST00000569715 SPTY2D1Q68D10 685 aaPredicted RBP12.96□□□□□ -0.34
PDXDC1-216ENST00000569715 C7orf43Q8WVR3 580 aa12.96□□□□□ -0.34
PDXDC1-216ENST00000569715 ZSCAN31Q96LW9 406 aaPredicted RBP12.96□□□□□ -0.34
PDXDC1-216ENST00000569715 MFSD14BQ5SR56 506 aa12.95□□□□□ -0.34
PDXDC1-216ENST00000569715 STK11IPQ8N1F8 1099 aa12.95□□□□□ -0.34
PDXDC1-216ENST00000569715 CNKSR1Q969H4 720 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms