RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 FAM182BQ5T319 152 aa6.37□□□□□ -1.39
SF3B3-213ENST00000569687 CCDC102BQ68D86 513 aa6.37□□□□□ -1.39
SF3B3-213ENST00000569687 Q6ZUG5 572 aa6.37□□□□□ -1.39
SF3B3-213ENST00000569687 STOX1Q6ZVD7 989 aa6.37□□□□□ -1.39
SF3B3-213ENST00000569687 KRT27Q7Z3Y8 459 aa6.37□□□□□ -1.39
SF3B3-213ENST00000569687 PLPP6Q8IY26 295 aa6.37□□□□□ -1.39
SF3B3-213ENST00000569687 SMARCC2Q8TAQ2 1214 aa6.37□□□□□ -1.39
SF3B3-213ENST00000569687 GTF3C6Q969F1 213 aa6.37□□□□□ -1.39
SF3B3-213ENST00000569687 PCMTD1Q96MG8 357 aaPredicted RBP6.37□□□□□ -1.39
SF3B3-213ENST00000569687 CCDC85AQ96PX6 553 aaPredicted RBP6.37□□□□□ -1.39
SF3B3-213ENST00000569687 CDC5LQ99459 802 aaKnown RBP6.37□□□□□ -1.39
SF3B3-213ENST00000569687 MPHOSPH8Q99549 860 aa6.37□□□□□ -1.39
SF3B3-213ENST00000569687 TCRBV5S4A2TA0A5A2 114 aa6.36□□□□□ -1.39
SF3B3-213ENST00000569687 PATL2C9JE40 543 aaKnown RBP6.36□□□□□ -1.39
SF3B3-213ENST00000569687 IGSF3O75054 1194 aa6.36□□□□□ -1.39
SF3B3-213ENST00000569687 HCLS1P14317 486 aaPredicted RBP6.36□□□□□ -1.39
SF3B3-213ENST00000569687 CD44P16070 742 aaKnown RBP6.36□□□□□ -1.39
SF3B3-213ENST00000569687 RXRBP28702 533 aa6.36□□□□□ -1.39
SF3B3-213ENST00000569687 IGHMBP2P38935 993 aaKnown RBP6.36□□□□□ -1.39
SF3B3-213ENST00000569687 UBE2HP62256 183 aa6.36□□□□□ -1.39
SF3B3-213ENST00000569687 MAP3K9P80192 1104 aa6.36□□□□□ -1.39
SF3B3-213ENST00000569687 IMMTQ16891 758 aaKnown RBP6.36□□□□□ -1.39
SF3B3-213ENST00000569687 SLFNL1Q499Z3 407 aa6.36□□□□□ -1.39
SF3B3-213ENST00000569687 CAVIN1Q6NZI2 390 aaKnown RBP6.36□□□□□ -1.39
SF3B3-213ENST00000569687 FAM196AQ6ZSG2 479 aa6.36□□□□□ -1.39
SF3B3-213ENST00000569687 PTF1AQ7RTS3 328 aa6.36□□□□□ -1.39
SF3B3-213ENST00000569687 MICALL2Q8IY33 904 aa6.36□□□□□ -1.39
SF3B3-213ENST00000569687 LINC00116Q8NCU8 138 aa6.36□□□□□ -1.39
SF3B3-213ENST00000569687 SYAP1Q96A49 352 aaPredicted RBP6.36□□□□□ -1.39
SF3B3-213ENST00000569687 MS4A3Q96HJ5 214 aa6.36□□□□□ -1.39
SF3B3-213ENST00000569687 STRBPQ96SI9 672 aaKnown RBP6.36□□□□□ -1.39
SF3B3-213ENST00000569687 PUS7LQ9H0K6 701 aaKnown RBP6.36□□□□□ -1.39
SF3B3-213ENST00000569687 PIH1D3Q9NQM4 214 aaKnown RBP6.36□□□□□ -1.39
SF3B3-213ENST00000569687 BSDC1Q9NW68 430 aaPredicted RBP6.36□□□□□ -1.39
SF3B3-213ENST00000569687 TMEM63CQ9P1W3 806 aa6.36□□□□□ -1.39
SF3B3-213ENST00000569687 NARFQ9UHQ1 456 aa6.36□□□□□ -1.39
SF3B3-213ENST00000569687 BRPF3Q9ULD4 1205 aa6.36□□□□□ -1.39
SF3B3-213ENST00000569687 NIP7Q9Y221 180 aaKnown RBP eCLIP6.36□□□□□ -1.39
SF3B3-213ENST00000569687 NUP98P52948 1817 aa6.36□□□□□ -1.39
SF3B3-213ENST00000569687 BRWD3Q6RI45 1802 aa6.36□□□□□ -1.39
SF3B3-213ENST00000569687 SBF2Q86WG5 1849 aa6.36□□□□□ -1.39
SF3B3-213ENST00000569687 EP400Q96L91 3159 aa6.36□□□□□ -1.39
SF3B3-213ENST00000569687 COL5A3P25940 1745 aaPredicted RBP6.36□□□□□ -1.39
SF3B3-213ENST00000569687 ELP1O95163 1332 aa6.35□□□□□ -1.39
SF3B3-213ENST00000569687 ZMYM6O95789 1325 aa6.35□□□□□ -1.39
SF3B3-213ENST00000569687 ZNF213O14771 459 aa6.35□□□□□ -1.39
SF3B3-213ENST00000569687 GPAA1O43292 621 aa6.35□□□□□ -1.39
SF3B3-213ENST00000569687 GADD45BO75293 160 aaPredicted RBP6.35□□□□□ -1.39
SF3B3-213ENST00000569687 PHF14O94880 888 aa6.35□□□□□ -1.39
SF3B3-213ENST00000569687 PDE6AP16499 860 aa6.35□□□□□ -1.39
SF3B3-213ENST00000569687 PDIA3P30101 505 aaKnown RBP6.35□□□□□ -1.39
SF3B3-213ENST00000569687 PHKA1P46020 1223 aa6.35□□□□□ -1.39
SF3B3-213ENST00000569687 HMGN5P82970 282 aaKnown RBP6.35□□□□□ -1.39
SF3B3-213ENST00000569687 UBE4AQ14139 1066 aa6.35□□□□□ -1.39
SF3B3-213ENST00000569687 WASHC4Q2M389 1173 aa6.35□□□□□ -1.39
SF3B3-213ENST00000569687 SLC9C2Q5TAH2 1124 aa6.35□□□□□ -1.39
SF3B3-213ENST00000569687 FOXD4L5Q5VV16 416 aaPredicted RBP6.35□□□□□ -1.39
SF3B3-213ENST00000569687 ATL3Q6DD88 541 aa6.35□□□□□ -1.39
SF3B3-213ENST00000569687 NAA16Q6N069 864 aaPredicted RBP6.35□□□□□ -1.39
SF3B3-213ENST00000569687 TMED8Q6PL24 325 aaPredicted RBP6.35□□□□□ -1.39
SF3B3-213ENST00000569687 LRSAM1Q6UWE0 723 aa6.35□□□□□ -1.39
SF3B3-213ENST00000569687 MB21D2Q8IYB1 491 aaPredicted RBP6.35□□□□□ -1.39
SF3B3-213ENST00000569687 SPATA5Q8NB90 893 aa6.35□□□□□ -1.39
SF3B3-213ENST00000569687 FOXD4L4Q8WXT5 416 aaPredicted RBP6.35□□□□□ -1.39
SF3B3-213ENST00000569687 CHAMP1Q96JM3 812 aa6.35□□□□□ -1.39
SF3B3-213ENST00000569687 PPP1R9BQ96SB3 815 aa6.35□□□□□ -1.39
SF3B3-213ENST00000569687 NYXQ9GZU5 481 aa6.35□□□□□ -1.39
SF3B3-213ENST00000569687 SCAND2PQ9GZW5 306 aaPredicted RBP6.35□□□□□ -1.39
SF3B3-213ENST00000569687 ZSCAN16Q9H4T2 348 aaPredicted RBP6.35□□□□□ -1.39
SF3B3-213ENST00000569687 BCL2L12Q9HB09 334 aa6.35□□□□□ -1.39
SF3B3-213ENST00000569687 SEC31BQ9NQW1 1179 aa6.35□□□□□ -1.39
SF3B3-213ENST00000569687 RGS17Q9UGC6 210 aaPredicted RBP6.35□□□□□ -1.39
SF3B3-213ENST00000569687 NSFL1CQ9UNZ2 370 aaKnown RBP6.35□□□□□ -1.39
SF3B3-213ENST00000569687 ANKRD36CQ5JPF3 1778 aa6.35□□□□□ -1.39
SF3B3-213ENST00000569687 LY75O60449 1722 aa6.35□□□□□ -1.39
SF3B3-213ENST00000569687 GNAT2P19087 354 aa6.34□□□□□ -1.39
SF3B3-213ENST00000569687 HMGB2P26583 209 aaKnown RBP6.34□□□□□ -1.39
SF3B3-213ENST00000569687 MCM5P33992 734 aa6.34□□□□□ -1.39
SF3B3-213ENST00000569687 CHRNDQ07001 517 aa6.34□□□□□ -1.39
SF3B3-213ENST00000569687 SCRN1Q12765 414 aa6.34□□□□□ -1.39
SF3B3-213ENST00000569687 MAP3K12Q12852 859 aa6.34□□□□□ -1.39
SF3B3-213ENST00000569687 MCM6Q14566 821 aa6.34□□□□□ -1.39
SF3B3-213ENST00000569687 ERFEQ4G0M1 354 aa6.34□□□□□ -1.39
SF3B3-213ENST00000569687 TTLL5Q6EMB2 1281 aa6.34□□□□□ -1.39
SF3B3-213ENST00000569687 FAM43AQ8N2R8 423 aa6.34□□□□□ -1.39
SF3B3-213ENST00000569687 NCOA7Q8NI08 942 aa6.34□□□□□ -1.39
SF3B3-213ENST00000569687 BRF1Q92994 677 aa6.34□□□□□ -1.39
SF3B3-213ENST00000569687 TCEANC2Q96MN5 208 aa6.34□□□□□ -1.39
SF3B3-213ENST00000569687 MTA3Q9BTC8 594 aa6.34□□□□□ -1.39
SF3B3-213ENST00000569687 GNL3LQ9NVN8 582 aaKnown RBP6.34□□□□□ -1.39
SF3B3-213ENST00000569687 CNPY2Q9Y2B0 182 aa6.34□□□□□ -1.39
SF3B3-213ENST00000569687 KIF3AQ9Y496 699 aa6.34□□□□□ -1.39
SF3B3-213ENST00000569687 MYH14Q7Z406 1995 aaKnown RBP6.33□□□□□ -1.4
SF3B3-213ENST00000569687 LRP5O75197 1615 aa6.33□□□□□ -1.4
SF3B3-213ENST00000569687 ZNF804BA4D1E1 1349 aa6.33□□□□□ -1.4
SF3B3-213ENST00000569687 PDS5AQ29RF7 1337 aaKnown RBP6.33□□□□□ -1.4
SF3B3-213ENST00000569687 PNPLA7Q6ZV29 1317 aa6.33□□□□□ -1.4
SF3B3-213ENST00000569687 ZNF532Q9HCE3 1301 aa6.33□□□□□ -1.4
SF3B3-213ENST00000569687 A0A0G2JLW4 131 aa6.33□□□□□ -1.4
SF3B3-213ENST00000569687 TTLL13PA6NNM8 815 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms