RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 PRELPP51888 382 aa11.6□□□□□ -0.55
CAPN3-219ENST00000569136 OLFM4Q6UX06 510 aa11.6□□□□□ -0.55
CAPN3-219ENST00000569136 DPP8Q6V1X1 898 aaPredicted RBP11.6□□□□□ -0.55
CAPN3-219ENST00000569136 UBE3BQ7Z3V4 1068 aa11.6□□□□□ -0.55
CAPN3-219ENST00000569136 ZNF526Q8TF50 670 aaPredicted RBP11.6□□□□□ -0.55
CAPN3-219ENST00000569136 JARID2Q92833 1246 aaPredicted RBP11.6□□□□□ -0.55
CAPN3-219ENST00000569136 CDC5LQ99459 802 aaKnown RBP11.6□□□□□ -0.55
CAPN3-219ENST00000569136 SLC6A16Q9GZN6 736 aa11.6□□□□□ -0.55
CAPN3-219ENST00000569136 SMC4Q9NTJ3 1288 aa11.6□□□□□ -0.55
CAPN3-219ENST00000569136 IPO8O15397 1037 aaKnown RBP11.59□□□□□ -0.55
CAPN3-219ENST00000569136 CSF1RP07333 972 aa11.59□□□□□ -0.55
CAPN3-219ENST00000569136 VEGFAP15692 232 aaPredicted RBP11.59□□□□□ -0.55
CAPN3-219ENST00000569136 CTSWP56202 376 aa11.59□□□□□ -0.55
CAPN3-219ENST00000569136 SLC4A10Q6U841 1118 aa11.59□□□□□ -0.55
CAPN3-219ENST00000569136 ANKRD18AQ8IVF6 992 aa11.59□□□□□ -0.55
CAPN3-219ENST00000569136 LARGE2Q8N3Y3 721 aa11.59□□□□□ -0.55
CAPN3-219ENST00000569136 ARHGAP45Q92619 1136 aa11.59□□□□□ -0.55
CAPN3-219ENST00000569136 CELF1Q92879 486 aaKnown RBP11.59□□□□□ -0.55
CAPN3-219ENST00000569136 HDAC5Q9UQL6 1122 aa11.59□□□□□ -0.55
CAPN3-219ENST00000569136 AFDNP55196 1824 aaKnown RBP11.58□□□□□ -0.56
CAPN3-219ENST00000569136 FZD9O00144 591 aa11.58□□□□□ -0.56
CAPN3-219ENST00000569136 GRM8O00222 908 aa11.58□□□□□ -0.56
CAPN3-219ENST00000569136 RARSP54136 660 aaKnown RBP11.58□□□□□ -0.56
CAPN3-219ENST00000569136 CASP7P55210 303 aa11.58□□□□□ -0.56
CAPN3-219ENST00000569136 EIF6P56537 245 aaKnown RBP11.58□□□□□ -0.56
CAPN3-219ENST00000569136 C1QTNF8P60827 252 aa11.58□□□□□ -0.56
CAPN3-219ENST00000569136 C16orf71Q8IYS4 520 aaPredicted RBP11.58□□□□□ -0.56
CAPN3-219ENST00000569136 API5Q9BZZ5 524 aaKnown RBP11.58□□□□□ -0.56
CAPN3-219ENST00000569136 RRAGCQ9HB90 399 aa11.58□□□□□ -0.56
CAPN3-219ENST00000569136 PRDM9Q9NQV7 894 aa11.58□□□□□ -0.56
CAPN3-219ENST00000569136 BSDC1Q9NW68 430 aaPredicted RBP11.58□□□□□ -0.56
CAPN3-219ENST00000569136 NSFL1CQ9UNZ2 370 aaKnown RBP11.58□□□□□ -0.56
CAPN3-219ENST00000569136 BCORQ6W2J9 1755 aa11.57□□□□□ -0.56
CAPN3-219ENST00000569136 N4BP2Q86UW6 1770 aaPredicted RBP11.57□□□□□ -0.56
CAPN3-219ENST00000569136 TOMM70O94826 608 aa11.57□□□□□ -0.56
CAPN3-219ENST00000569136 S1PR4O95977 384 aa11.57□□□□□ -0.56
CAPN3-219ENST00000569136 IGHMBP2P38935 993 aaKnown RBP11.57□□□□□ -0.56
CAPN3-219ENST00000569136 FAM160A2Q8N612 972 aaPredicted RBP11.57□□□□□ -0.56
CAPN3-219ENST00000569136 EYA3Q99504 573 aa11.57□□□□□ -0.56
CAPN3-219ENST00000569136 SEC31BQ9NQW1 1179 aa11.57□□□□□ -0.56
CAPN3-219ENST00000569136 PODXL2Q9NZ53 605 aa11.57□□□□□ -0.56
CAPN3-219ENST00000569136 IQCA1LA6NCM1 817 aa11.56□□□□□ -0.56
CAPN3-219ENST00000569136 CFAP99D6REC4 459 aa11.56□□□□□ -0.56
CAPN3-219ENST00000569136 PPIP5K2O43314 1243 aa11.56□□□□□ -0.56
CAPN3-219ENST00000569136 RFC5P40937 340 aa11.56□□□□□ -0.56
CAPN3-219ENST00000569136 CCT4P50991 539 aaKnown RBP11.56□□□□□ -0.56
CAPN3-219ENST00000569136 KIAA2012Q0VF49 1180 aa11.56□□□□□ -0.56
CAPN3-219ENST00000569136 IFIT5Q13325 482 aaKnown RBP11.56□□□□□ -0.56
CAPN3-219ENST00000569136 WASHC4Q2M389 1173 aa11.56□□□□□ -0.56
CAPN3-219ENST00000569136 NIM1KQ8IY84 436 aa11.56□□□□□ -0.56
CAPN3-219ENST00000569136 ZC3H12CQ9C0D7 883 aaKnown RBP11.56□□□□□ -0.56
CAPN3-219ENST00000569136 NMRK2Q9NPI5 230 aa11.56□□□□□ -0.56
CAPN3-219ENST00000569136 ANKIB1Q9P2G1 1089 aa11.56□□□□□ -0.56
CAPN3-219ENST00000569136 ZNRF3Q9ULT6 936 aa11.56□□□□□ -0.56
CAPN3-219ENST00000569136 NOB1Q9ULX3 412 aaKnown RBP11.56□□□□□ -0.56
CAPN3-219ENST00000569136 ZBED9Q6R2W3 1325 aa11.56□□□□□ -0.56
CAPN3-219ENST00000569136 NUP98P52948 1817 aa11.56□□□□□ -0.56
CAPN3-219ENST00000569136 RTL9Q8NET4 1388 aa11.55□□□□□ -0.56
CAPN3-219ENST00000569136 KIAA1551Q9HCM1 1747 aa11.55□□□□□ -0.56
CAPN3-219ENST00000569136 CHD4Q14839 1912 aa11.55□□□□□ -0.56
CAPN3-219ENST00000569136 ANKRD18BA2A2Z9 1011 aa11.55□□□□□ -0.56
CAPN3-219ENST00000569136 AP1G2O75843 785 aa11.55□□□□□ -0.56
CAPN3-219ENST00000569136 GGCXP38435 758 aa11.55□□□□□ -0.56
CAPN3-219ENST00000569136 TNIP1Q15025 636 aa11.55□□□□□ -0.56
CAPN3-219ENST00000569136 GPC2Q8N158 579 aa11.55□□□□□ -0.56
CAPN3-219ENST00000569136 HELBQ8NG08 1087 aaPredicted RBP11.55□□□□□ -0.56
CAPN3-219ENST00000569136 CCDC85AQ96PX6 553 aaPredicted RBP11.55□□□□□ -0.56
CAPN3-219ENST00000569136 MPHOSPH8Q99549 860 aa11.55□□□□□ -0.56
CAPN3-219ENST00000569136 BCL2L13Q9BXK5 485 aa11.55□□□□□ -0.56
CAPN3-219ENST00000569136 ANKRD2Q9GZV1 360 aa11.55□□□□□ -0.56
CAPN3-219ENST00000569136 GREM2Q9H772 168 aa11.55□□□□□ -0.56
CAPN3-219ENST00000569136 GGA1Q9UJY5 639 aa11.55□□□□□ -0.56
CAPN3-219ENST00000569136 UTYO14607 1347 aa11.55□□□□□ -0.56
CAPN3-219ENST00000569136 DDNO94850 711 aaPredicted RBP11.54□□□□□ -0.56
CAPN3-219ENST00000569136 ITGA6P23229 1130 aa11.54□□□□□ -0.56
CAPN3-219ENST00000569136 ATP2B4P23634 1241 aa11.54□□□□□ -0.56
CAPN3-219ENST00000569136 GPSM2P81274 684 aa11.54□□□□□ -0.56
CAPN3-219ENST00000569136 FOXO4P98177 505 aa11.54□□□□□ -0.56
CAPN3-219ENST00000569136 CCDC57Q2TAC2 916 aa11.54□□□□□ -0.56
CAPN3-219ENST00000569136 MSS51Q4VC12 460 aa11.54□□□□□ -0.56
CAPN3-219ENST00000569136 TBC1D16Q8TBP0 767 aa11.54□□□□□ -0.56
CAPN3-219ENST00000569136 POLLQ9UGP5 575 aa11.54□□□□□ -0.56
CAPN3-219ENST00000569136 MINPP1Q9UNW1 487 aa11.54□□□□□ -0.56
CAPN3-219ENST00000569136 FSTL1Q12841 308 aa11.53□□□□□ -0.56
CAPN3-219ENST00000569136 AOC3Q16853 763 aa11.53□□□□□ -0.56
CAPN3-219ENST00000569136 PPP2R2DQ66LE6 453 aa11.53□□□□□ -0.56
CAPN3-219ENST00000569136 LMBR1LQ6UX01 489 aa11.53□□□□□ -0.56
CAPN3-219ENST00000569136 USP44Q9H0E7 712 aa11.53□□□□□ -0.56
CAPN3-219ENST00000569136 LEMD3Q9Y2U8 911 aa11.53□□□□□ -0.56
CAPN3-219ENST00000569136 XDHP47989 1333 aa11.53□□□□□ -0.56
CAPN3-219ENST00000569136 KIF16BQ96L93 1317 aa11.53□□□□□ -0.56
CAPN3-219ENST00000569136 SLX4Q8IY92 1834 aa11.52□□□□□ -0.57
CAPN3-219ENST00000569136 NBPF7P0C2Y1 421 aaPredicted RBP11.52□□□□□ -0.57
CAPN3-219ENST00000569136 JUNDP17535 347 aa11.52□□□□□ -0.57
CAPN3-219ENST00000569136 CHMP3Q9Y3E7 222 aa11.52□□□□□ -0.57
CAPN3-219ENST00000569136 ANKRD31Q8N7Z5 1873 aa11.52□□□□□ -0.57
CAPN3-219ENST00000569136 SNED1Q8TER0 1413 aa11.52□□□□□ -0.57
CAPN3-219ENST00000569136 ARFGEF1Q9Y6D6 1849 aa11.51□□□□□ -0.57
CAPN3-219ENST00000569136 POTECB2RU33 542 aa11.51□□□□□ -0.57
CAPN3-219ENST00000569136 UFL1O94874 794 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms