RNA–Protein interactions for RNA: ENST00000569005.5

EIF3C-213, Transcript of eukaryotic translation initiation factor 3 subunit C, human

TSL 5

Gene EIF3C, Length 610 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF3C-213	ENST00000569005	RFX5	P48382	616 aa	Predicted RBP	13.41	□□□□□ -0.26
EIF3C-213	ENST00000569005	CAP1	Q01518	475 aa		13.41	□□□□□ -0.26
EIF3C-213	ENST00000569005	SUPT20HL1	Q3ZLR7	823 aa		13.41	□□□□□ -0.26
EIF3C-213	ENST00000569005	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.41	□□□□□ -0.26
EIF3C-213	ENST00000569005	IFNL1	Q8IU54	200 aa		13.41	□□□□□ -0.26
EIF3C-213	ENST00000569005	DZIP1L	Q8IYY4	767 aa	Known RBP	13.41	□□□□□ -0.26
EIF3C-213	ENST00000569005	WNK4	Q96J92	1243 aa		13.41	□□□□□ -0.26
EIF3C-213	ENST00000569005	TDRD3	Q9H7E2	651 aa	Known RBP	13.41	□□□□□ -0.26
EIF3C-213	ENST00000569005	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	13.41	□□□□□ -0.26
EIF3C-213	ENST00000569005	PPP1R12B	O60237	982 aa	Predicted RBP	13.4	□□□□□ -0.26
EIF3C-213	ENST00000569005	FGFR2	P21802	821 aa		13.4	□□□□□ -0.26
EIF3C-213	ENST00000569005	RBM5	P52756	815 aa	Known RBP eCLIP	13.4	□□□□□ -0.26
EIF3C-213	ENST00000569005	KIF16B	Q96L93	1317 aa		13.39	□□□□□ -0.27
EIF3C-213	ENST00000569005	MANSC4	A6NHS7	340 aa	Predicted RBP	13.39	□□□□□ -0.27
EIF3C-213	ENST00000569005	CRK	P46108	304 aa		13.39	□□□□□ -0.27
EIF3C-213	ENST00000569005	BCAM	P50895	628 aa		13.39	□□□□□ -0.27
EIF3C-213	ENST00000569005	ALDH1L2	Q3SY69	923 aa		13.39	□□□□□ -0.27
EIF3C-213	ENST00000569005	METTL24	Q5JXM2	366 aa		13.39	□□□□□ -0.27
EIF3C-213	ENST00000569005	PRPF38B	Q5VTL8	546 aa	Known RBP	13.39	□□□□□ -0.27
EIF3C-213	ENST00000569005	PTPN18	Q99952	460 aa		13.39	□□□□□ -0.27
EIF3C-213	ENST00000569005	TRIM17	Q9Y577	477 aa		13.39	□□□□□ -0.27
EIF3C-213	ENST00000569005	POTEF	A5A3E0	1075 aa		13.38	□□□□□ -0.27
EIF3C-213	ENST00000569005	INHBE	P58166	350 aa		13.38	□□□□□ -0.27
EIF3C-213	ENST00000569005	HDLBP	Q00341	1268 aa	Known RBP	13.38	□□□□□ -0.27
EIF3C-213	ENST00000569005	OTOP1	Q7RTM1	612 aa		13.38	□□□□□ -0.27
EIF3C-213	ENST00000569005	ATG9A	Q7Z3C6	839 aa		13.38	□□□□□ -0.27
EIF3C-213	ENST00000569005	CNKSR2	Q8WXI2	1034 aa		13.38	□□□□□ -0.27
EIF3C-213	ENST00000569005	TMEM39B	Q9GZU3	492 aa		13.38	□□□□□ -0.27
EIF3C-213	ENST00000569005	TESPA1	A2RU30	521 aa	Predicted RBP	13.37	□□□□□ -0.27
EIF3C-213	ENST00000569005	ALDH1A1	P00352	501 aa		13.37	□□□□□ -0.27
EIF3C-213	ENST00000569005	IREB2	P48200	963 aa	Known RBP	13.37	□□□□□ -0.27
EIF3C-213	ENST00000569005	CHAF1A	Q13111	956 aa	Predicted RBP	13.37	□□□□□ -0.27
EIF3C-213	ENST00000569005	CRHR2	Q13324	411 aa		13.37	□□□□□ -0.27
EIF3C-213	ENST00000569005	TNFAIP1	Q13829	316 aa		13.37	□□□□□ -0.27
EIF3C-213	ENST00000569005	PUM3	Q15397	648 aa	Known RBP	13.37	□□□□□ -0.27
EIF3C-213	ENST00000569005	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	13.37	□□□□□ -0.27
EIF3C-213	ENST00000569005	ANKRD13A	Q8IZ07	590 aa		13.37	□□□□□ -0.27
EIF3C-213	ENST00000569005	CD99L2	Q8TCZ2	262 aa		13.37	□□□□□ -0.27
EIF3C-213	ENST00000569005	TBC1D22A	Q8WUA7	517 aa		13.37	□□□□□ -0.27
EIF3C-213	ENST00000569005	ELP3	Q9H9T3	547 aa		13.37	□□□□□ -0.27
EIF3C-213	ENST00000569005	TCP10L2	B9ZVM9	353 aa		13.36	□□□□□ -0.27
EIF3C-213	ENST00000569005	EYA2	O00167	538 aa		13.36	□□□□□ -0.27
EIF3C-213	ENST00000569005	CACNB3	P54284	484 aa		13.36	□□□□□ -0.27
EIF3C-213	ENST00000569005	CAVIN4	Q5BKX8	364 aa		13.36	□□□□□ -0.27
EIF3C-213	ENST00000569005	APOBEC3H	Q6NTF7	200 aa	Known RBP	13.36	□□□□□ -0.27
EIF3C-213	ENST00000569005	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	13.36	□□□□□ -0.27
EIF3C-213	ENST00000569005	MS4A4A	Q96JQ5	239 aa		13.36	□□□□□ -0.27
EIF3C-213	ENST00000569005	ZDHHC15	Q96MV8	337 aa		13.36	□□□□□ -0.27
EIF3C-213	ENST00000569005	MRI	Q9BWK5	157 aa		13.36	□□□□□ -0.27
EIF3C-213	ENST00000569005	VGLL4	Q14135	290 aa		13.35	□□□□□ -0.27
EIF3C-213	ENST00000569005	VPS37D	Q86XT2	251 aa		13.35	□□□□□ -0.27
EIF3C-213	ENST00000569005	OPTN	Q96CV9	577 aa		13.35	□□□□□ -0.27
EIF3C-213	ENST00000569005	SMC4	Q9NTJ3	1288 aa		13.35	□□□□□ -0.27
EIF3C-213	ENST00000569005	FKBP1C	Q5VVH2	108 aa		13.34	□□□□□ -0.27
EIF3C-213	ENST00000569005	TEKT1	Q969V4	418 aa		13.34	□□□□□ -0.27
EIF3C-213	ENST00000569005	PCDH10	Q9P2E7	1040 aa		13.34	□□□□□ -0.27
EIF3C-213	ENST00000569005	PTPN22	Q9Y2R2	807 aa		13.34	□□□□□ -0.27
EIF3C-213	ENST00000569005	SUGT1	Q9Y2Z0	365 aa		13.34	□□□□□ -0.27
EIF3C-213	ENST00000569005	MYH13	Q9UKX3	1938 aa		13.34	□□□□□ -0.27
EIF3C-213	ENST00000569005	KIAA0100	Q14667	2235 aa	Known RBP	13.33	□□□□□ -0.27
EIF3C-213	ENST00000569005	IFIT1	P09914	478 aa	Known RBP	13.33	□□□□□ -0.28
EIF3C-213	ENST00000569005	CT47B1	P0C2W7	299 aa	Predicted RBP	13.33	□□□□□ -0.28
EIF3C-213	ENST00000569005	EN2	P19622	333 aa	Predicted RBP	13.33	□□□□□ -0.28
EIF3C-213	ENST00000569005	FAM83A	Q86UY5	434 aa		13.33	□□□□□ -0.28
EIF3C-213	ENST00000569005	BRI3BP	Q8WY22	251 aa		13.33	□□□□□ -0.28
EIF3C-213	ENST00000569005	LPIN2	Q92539	896 aa		13.33	□□□□□ -0.28
EIF3C-213	ENST00000569005	NOB1	Q9ULX3	412 aa	Known RBP	13.33	□□□□□ -0.28
EIF3C-213	ENST00000569005	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.32	□□□□□ -0.28
EIF3C-213	ENST00000569005	FRAT2	O75474	233 aa	Predicted RBP	13.32	□□□□□ -0.28
EIF3C-213	ENST00000569005	CIAO1	O76071	339 aa		13.32	□□□□□ -0.28
EIF3C-213	ENST00000569005	UBTFL1	P0CB47	393 aa	Predicted RBP	13.32	□□□□□ -0.28
EIF3C-213	ENST00000569005	TNNI2	P48788	182 aa		13.32	□□□□□ -0.28
EIF3C-213	ENST00000569005	MAP3K9	P80192	1104 aa		13.32	□□□□□ -0.28
EIF3C-213	ENST00000569005	HHIPL2	Q6UWX4	724 aa		13.32	□□□□□ -0.28
EIF3C-213	ENST00000569005	EFCC1	Q9HA90	598 aa		13.32	□□□□□ -0.28
EIF3C-213	ENST00000569005	FBXO3	Q9UK99	471 aa		13.32	□□□□□ -0.28
EIF3C-213	ENST00000569005	SNCAIP	Q9Y6H5	919 aa		13.32	□□□□□ -0.28
EIF3C-213	ENST00000569005	SPDYE5	A6NIY4	337 aa		13.31	□□□□□ -0.28
EIF3C-213	ENST00000569005	ZBTB22	O15209	634 aa		13.31	□□□□□ -0.28
EIF3C-213	ENST00000569005	SLC5A1	P13866	664 aa		13.31	□□□□□ -0.28
EIF3C-213	ENST00000569005	SP3	Q02447	781 aa		13.31	□□□□□ -0.28
EIF3C-213	ENST00000569005	SIL1	Q9H173	461 aa		13.31	□□□□□ -0.28
EIF3C-213	ENST00000569005	LRRFIP2	Q9Y608	721 aa	Known RBP	13.31	□□□□□ -0.28
EIF3C-213	ENST00000569005	MAST3	O60307	1309 aa		13.31	□□□□□ -0.28
EIF3C-213	ENST00000569005	ECM2	O94769	699 aa	Predicted RBP	13.3	□□□□□ -0.28
EIF3C-213	ENST00000569005	MYC	P01106	439 aa	Predicted RBP	13.3	□□□□□ -0.28
EIF3C-213	ENST00000569005	PRDX5	P30044	214 aa		13.3	□□□□□ -0.28
EIF3C-213	ENST00000569005	RARS	P54136	660 aa	Known RBP	13.3	□□□□□ -0.28
EIF3C-213	ENST00000569005	DIXDC1	Q155Q3	683 aa		13.3	□□□□□ -0.28
EIF3C-213	ENST00000569005	ATP2B3	Q16720	1220 aa		13.3	□□□□□ -0.28
EIF3C-213	ENST00000569005	FAM43A	Q8N2R8	423 aa		13.3	□□□□□ -0.28
EIF3C-213	ENST00000569005	WDR66	Q8TBY9	1149 aa		13.3	□□□□□ -0.28
EIF3C-213	ENST00000569005	OTUD5	Q96G74	571 aa		13.3	□□□□□ -0.28
EIF3C-213	ENST00000569005	ERO1A	Q96HE7	468 aa		13.3	□□□□□ -0.28
EIF3C-213	ENST00000569005	MEIS3	Q99687	375 aa		13.3	□□□□□ -0.28
EIF3C-213	ENST00000569005	COPRS	Q9NQ92	184 aa		13.3	□□□□□ -0.28
EIF3C-213	ENST00000569005	PA2G4	Q9UQ80	394 aa	Known RBP	13.3	□□□□□ -0.28
EIF3C-213	ENST00000569005	DAGLA	Q9Y4D2	1042 aa		13.3	□□□□□ -0.28
EIF3C-213	ENST00000569005	CCL15-CCL14	A0A0B4J2E2	113 aa		13.29	□□□□□ -0.28
EIF3C-213	ENST00000569005	CCER2	I3L3R5	266 aa		13.29	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms