RNA–Protein interactions for RNA: ENST00000568691.5

VPS9D1-207, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-207ENST00000568691 FARP2O94887 1054 aaPredicted RBP15.24■□□□□ 0.03
VPS9D1-207ENST00000568691 GNRH1P01148 92 aa15.24■□□□□ 0.03
VPS9D1-207ENST00000568691 PSMC4P43686 418 aa15.24■□□□□ 0.03
VPS9D1-207ENST00000568691 MAP3K9P80192 1104 aa15.24■□□□□ 0.03
VPS9D1-207ENST00000568691 NCBP3Q53F19 620 aaKnown RBP15.24■□□□□ 0.03
VPS9D1-207ENST00000568691 NKX2-3Q8TAU0 364 aa15.24■□□□□ 0.03
VPS9D1-207ENST00000568691 UNC93B1Q9H1C4 597 aa15.24■□□□□ 0.03
VPS9D1-207ENST00000568691 ADAMTS8Q9UP79 889 aa15.24■□□□□ 0.03
VPS9D1-207ENST00000568691 IL1R1P14778 569 aa15.23■□□□□ 0.03
VPS9D1-207ENST00000568691 NEUROD2Q15784 382 aa15.23■□□□□ 0.03
VPS9D1-207ENST00000568691 GPR153Q6NV75 609 aa15.23■□□□□ 0.03
VPS9D1-207ENST00000568691 C15orf52Q6ZUT6 534 aaKnown RBP15.23■□□□□ 0.03
VPS9D1-207ENST00000568691 TMEM39BQ9GZU3 492 aa15.23■□□□□ 0.03
VPS9D1-207ENST00000568691 RNF208Q9H0X6 261 aa15.23■□□□□ 0.03
VPS9D1-207ENST00000568691 PNNQ9H307 717 aaKnown RBP15.23■□□□□ 0.03
VPS9D1-207ENST00000568691 CPA4Q9UI42 421 aa15.23■□□□□ 0.03
VPS9D1-207ENST00000568691 ALPK3Q96L96 1907 aa15.23■□□□□ 0.03
VPS9D1-207ENST00000568691 IRF6O14896 467 aa15.22■□□□□ 0.03
VPS9D1-207ENST00000568691 FKBP1AP62942 108 aaKnown RBP15.22■□□□□ 0.03
VPS9D1-207ENST00000568691 CHRNDQ07001 517 aa15.22■□□□□ 0.03
VPS9D1-207ENST00000568691 LMOD3Q0VAK6 560 aa15.22■□□□□ 0.03
VPS9D1-207ENST00000568691 KIF22Q14807 665 aa15.22■□□□□ 0.03
VPS9D1-207ENST00000568691 TDRD3Q9H7E2 651 aaKnown RBP15.22■□□□□ 0.03
VPS9D1-207ENST00000568691 ZCCHC17Q9NP64 241 aaKnown RBP15.22■□□□□ 0.03
VPS9D1-207ENST00000568691 MBIPQ9NS73 344 aa15.22■□□□□ 0.03
VPS9D1-207ENST00000568691 EYSQ5T1H1 3165 aa15.22■□□□□ 0.03
VPS9D1-207ENST00000568691 MYO1BO43795 1136 aa15.21■□□□□ 0.03
VPS9D1-207ENST00000568691 SGPL1O95470 568 aa15.21■□□□□ 0.03
VPS9D1-207ENST00000568691 BMP8BP34820 402 aa15.21■□□□□ 0.03
VPS9D1-207ENST00000568691 MOGSQ13724 837 aa15.21■□□□□ 0.03
VPS9D1-207ENST00000568691 CCDC146Q8IYE0 955 aa15.21■□□□□ 0.03
VPS9D1-207ENST00000568691 GABRQQ9UN88 632 aa15.21■□□□□ 0.03
VPS9D1-207ENST00000568691 H7C1W4 665 aa15.2■□□□□ 0.02
VPS9D1-207ENST00000568691 EVI5O60447 810 aa15.2■□□□□ 0.02
VPS9D1-207ENST00000568691 TAF5LO75529 589 aa15.2■□□□□ 0.02
VPS9D1-207ENST00000568691 ZNF853P0CG23 659 aa15.2■□□□□ 0.02
VPS9D1-207ENST00000568691 CETPP11597 493 aa15.2■□□□□ 0.02
VPS9D1-207ENST00000568691 ITGA6P23229 1130 aa15.2■□□□□ 0.02
VPS9D1-207ENST00000568691 CASP7P55210 303 aa15.2■□□□□ 0.02
VPS9D1-207ENST00000568691 PRKCZQ05513 592 aa15.2■□□□□ 0.02
VPS9D1-207ENST00000568691 CWF19L2Q2TBE0 894 aaKnown RBP15.2■□□□□ 0.02
VPS9D1-207ENST00000568691 HELBQ8NG08 1087 aaPredicted RBP15.2■□□□□ 0.02
VPS9D1-207ENST00000568691 ZKSCAN4Q969J2 545 aaPredicted RBP15.2■□□□□ 0.02
VPS9D1-207ENST00000568691 ANKRD2Q9GZV1 360 aa15.2■□□□□ 0.02
VPS9D1-207ENST00000568691 MAP3K2Q9Y2U5 619 aa15.2■□□□□ 0.02
VPS9D1-207ENST00000568691 MYPNQ86TC9 1320 aa15.19■□□□□ 0.02
VPS9D1-207ENST00000568691 TCP10L2B9ZVM9 353 aa15.19■□□□□ 0.02
VPS9D1-207ENST00000568691 IGHMBP2P38935 993 aaKnown RBP15.19■□□□□ 0.02
VPS9D1-207ENST00000568691 BCAMP50895 628 aa15.19■□□□□ 0.02
VPS9D1-207ENST00000568691 GRIK5Q16478 980 aa15.19■□□□□ 0.02
VPS9D1-207ENST00000568691 RAET1EQ8TD07 263 aa15.19■□□□□ 0.02
VPS9D1-207ENST00000568691 DIS3LQ8TF46 1054 aaKnown RBP15.19■□□□□ 0.02
VPS9D1-207ENST00000568691 ARAP2Q8WZ64 1704 aa15.19■□□□□ 0.02
VPS9D1-207ENST00000568691 MYH3P11055 1940 aa15.19■□□□□ 0.02
VPS9D1-207ENST00000568691 ELL2O00472 640 aaPredicted RBP15.18■□□□□ 0.02
VPS9D1-207ENST00000568691 CSF1RP07333 972 aa15.18■□□□□ 0.02
VPS9D1-207ENST00000568691 RBM5P52756 815 aaKnown RBP eCLIP15.18■□□□□ 0.02
VPS9D1-207ENST00000568691 LRIT3Q3SXY7 679 aa15.18■□□□□ 0.02
VPS9D1-207ENST00000568691 ERO1BQ86YB8 467 aa15.18■□□□□ 0.02
VPS9D1-207ENST00000568691 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.18■□□□□ 0.02
VPS9D1-207ENST00000568691 LAMA2P24043 3122 aaKnown RBP15.18■□□□□ 0.02
VPS9D1-207ENST00000568691 NEURL1BA8MQ27 555 aa15.17■□□□□ 0.02
VPS9D1-207ENST00000568691 BCRP11274 1271 aa15.17■□□□□ 0.02
VPS9D1-207ENST00000568691 PPIL2Q13356 520 aa15.17■□□□□ 0.02
VPS9D1-207ENST00000568691 SNAPC2Q13487 334 aa15.17■□□□□ 0.02
VPS9D1-207ENST00000568691 UBE3BQ7Z3V4 1068 aa15.17■□□□□ 0.02
VPS9D1-207ENST00000568691 DZIP1LQ8IYY4 767 aaKnown RBP15.17■□□□□ 0.02
VPS9D1-207ENST00000568691 C8orf58Q8NAV2 365 aa15.17■□□□□ 0.02
VPS9D1-207ENST00000568691 RUNDC1Q96C34 613 aa15.17■□□□□ 0.02
VPS9D1-207ENST00000568691 PLA2G12BQ9BX93 195 aa15.17■□□□□ 0.02
VPS9D1-207ENST00000568691 CRISPLD2Q9H0B8 497 aa15.17■□□□□ 0.02
VPS9D1-207ENST00000568691 ZMYND8Q9ULU4 1186 aaPredicted RBP15.17■□□□□ 0.02
VPS9D1-207ENST00000568691 CSADQ9Y600 493 aa15.17■□□□□ 0.02
VPS9D1-207ENST00000568691 FAM205AQ6ZU69 1335 aa15.17■□□□□ 0.02
VPS9D1-207ENST00000568691 ZNF521Q96K83 1311 aa15.17■□□□□ 0.02
VPS9D1-207ENST00000568691 A0A1B0GUL6 1792 aa15.16■□□□□ 0.02
VPS9D1-207ENST00000568691 PI4KAP2A4QPH2 592 aa15.16■□□□□ 0.02
VPS9D1-207ENST00000568691 FMNL1O95466 1100 aaPredicted RBP15.16■□□□□ 0.02
VPS9D1-207ENST00000568691 CACNB3P54284 484 aa15.16■□□□□ 0.02
VPS9D1-207ENST00000568691 TNFAIP1Q13829 316 aa15.16■□□□□ 0.02
VPS9D1-207ENST00000568691 PI4KAP1Q8N8J0 262 aa15.16■□□□□ 0.02
VPS9D1-207ENST00000568691 PAWRQ96IZ0 340 aaKnown RBP15.16■□□□□ 0.02
VPS9D1-207ENST00000568691 SERPINA10Q9UK55 444 aa15.16■□□□□ 0.02
VPS9D1-207ENST00000568691 PRUNE2Q8WUY3 3088 aa15.16■□□□□ 0.02
VPS9D1-207ENST00000568691 TTC28Q96AY4 2481 aa15.15■□□□□ 0.02
VPS9D1-207ENST00000568691 PDHXO00330 501 aa15.15■□□□□ 0.02
VPS9D1-207ENST00000568691 ELNP15502 786 aa15.15■□□□□ 0.02
VPS9D1-207ENST00000568691 KCNJ4P48050 445 aa15.15■□□□□ 0.02
VPS9D1-207ENST00000568691 KSR2Q6VAB6 950 aa15.15■□□□□ 0.02
VPS9D1-207ENST00000568691 ANKRD23Q86SG2 305 aa15.15■□□□□ 0.02
VPS9D1-207ENST00000568691 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.15■□□□□ 0.02
VPS9D1-207ENST00000568691 GUCD1Q96NT3 240 aa15.15■□□□□ 0.02
VPS9D1-207ENST00000568691 DEFB118Q96PH6 123 aa15.15■□□□□ 0.02
VPS9D1-207ENST00000568691 WRNIP1Q96S55 665 aa15.15■□□□□ 0.02
VPS9D1-207ENST00000568691 PAK6Q9NQU5 681 aaPredicted RBP15.15■□□□□ 0.02
VPS9D1-207ENST00000568691 BIN2Q9UBW5 565 aaPredicted RBP15.15■□□□□ 0.02
VPS9D1-207ENST00000568691 HOXD10P28358 340 aa15.14■□□□□ 0.01
VPS9D1-207ENST00000568691 UBXN2AP68543 259 aa15.14■□□□□ 0.01
VPS9D1-207ENST00000568691 GPAT2Q6NUI2 795 aa15.14■□□□□ 0.01
VPS9D1-207ENST00000568691 SLAIN1Q8ND83 568 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms