RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 CIAO1O76071 339 aa16.04■□□□□ 0.16
TSC2-220ENST00000568238 MKRN3Q13064 507 aaKnown RBP16.04■□□□□ 0.16
TSC2-220ENST00000568238 RASA3Q14644 834 aa16.04■□□□□ 0.16
TSC2-220ENST00000568238 MAP3K11Q16584 847 aa16.04■□□□□ 0.16
TSC2-220ENST00000568238 ATG9AQ7Z3C6 839 aa16.04■□□□□ 0.16
TSC2-220ENST00000568238 DZIP1LQ8IYY4 767 aaKnown RBP16.04■□□□□ 0.16
TSC2-220ENST00000568238 LPIN2Q92539 896 aa16.04■□□□□ 0.16
TSC2-220ENST00000568238 MCOLN1Q9GZU1 580 aa16.04■□□□□ 0.16
TSC2-220ENST00000568238 ZNF70Q9UC06 446 aaPredicted RBP16.04■□□□□ 0.16
TSC2-220ENST00000568238 FZD1Q9UP38 647 aa16.04■□□□□ 0.16
TSC2-220ENST00000568238 MAST3O60307 1309 aa16.03■□□□□ 0.16
TSC2-220ENST00000568238 IPO8O15397 1037 aaKnown RBP16.03■□□□□ 0.16
TSC2-220ENST00000568238 SREBF2Q12772 1141 aa16.03■□□□□ 0.16
TSC2-220ENST00000568238 GRIK5Q16478 980 aa16.03■□□□□ 0.16
TSC2-220ENST00000568238 INTS3Q68E01 1043 aaKnown RBP16.03■□□□□ 0.16
TSC2-220ENST00000568238 TEKT1Q969V4 418 aa16.03■□□□□ 0.16
TSC2-220ENST00000568238 TDRD3Q9H7E2 651 aaKnown RBP16.03■□□□□ 0.16
TSC2-220ENST00000568238 TNNQ9UQP3 1299 aa16.03■□□□□ 0.16
TSC2-220ENST00000568238 GNAI3P08754 354 aa16.02■□□□□ 0.16
TSC2-220ENST00000568238 TRIM27P14373 513 aa16.02■□□□□ 0.16
TSC2-220ENST00000568238 IREB2P48200 963 aaKnown RBP16.02■□□□□ 0.16
TSC2-220ENST00000568238 HDLBPQ00341 1268 aaKnown RBP16.02■□□□□ 0.16
TSC2-220ENST00000568238 DGKZQ13574 1117 aa16.02■□□□□ 0.16
TSC2-220ENST00000568238 ATP2B3Q16720 1220 aa16.02■□□□□ 0.16
TSC2-220ENST00000568238 NBPF12Q5TAG4 269 aaPredicted RBP16.02■□□□□ 0.16
TSC2-220ENST00000568238 ATF7IPQ6VMQ6 1270 aa16.02■□□□□ 0.16
TSC2-220ENST00000568238 CEP126Q9P2H0 1117 aa16.02■□□□□ 0.16
TSC2-220ENST00000568238 SUGT1Q9Y2Z0 365 aa16.02■□□□□ 0.16
TSC2-220ENST00000568238 UNCXA6NJT0 531 aa16.01■□□□□ 0.15
TSC2-220ENST00000568238 IL15P40933 162 aaPredicted RBP16.01■□□□□ 0.15
TSC2-220ENST00000568238 TNNI2P48788 182 aa16.01■□□□□ 0.15
TSC2-220ENST00000568238 SPRYD7Q5W111 196 aa16.01■□□□□ 0.15
TSC2-220ENST00000568238 ZKSCAN2Q63HK3 967 aa16.01■□□□□ 0.15
TSC2-220ENST00000568238 CLUAP1Q96AJ1 413 aa16.01■□□□□ 0.15
TSC2-220ENST00000568238 COPRSQ9NQ92 184 aa16.01■□□□□ 0.15
TSC2-220ENST00000568238 CCDC85CA6NKD9 419 aa16■□□□□ 0.15
TSC2-220ENST00000568238 TCP10L2B9ZVM9 353 aa16■□□□□ 0.15
TSC2-220ENST00000568238 TM4SF4P48230 202 aa16■□□□□ 0.15
TSC2-220ENST00000568238 WDR66Q8TBY9 1149 aa16■□□□□ 0.15
TSC2-220ENST00000568238 SLC10A4Q96EP9 437 aa16■□□□□ 0.15
TSC2-220ENST00000568238 CLMNQ96JQ2 1002 aa16■□□□□ 0.15
TSC2-220ENST00000568238 ZDHHC15Q96MV8 337 aa16■□□□□ 0.15
TSC2-220ENST00000568238 ZBTB4Q9P1Z0 1013 aaPredicted RBP16■□□□□ 0.15
TSC2-220ENST00000568238 PA2G4Q9UQ80 394 aaKnown RBP16■□□□□ 0.15
TSC2-220ENST00000568238 ZBTB48P10074 688 aaPredicted RBP15.99■□□□□ 0.15
TSC2-220ENST00000568238 WNK4Q96J92 1243 aa15.99■□□□□ 0.15
TSC2-220ENST00000568238 TMEM39BQ9GZU3 492 aa15.99■□□□□ 0.15
TSC2-220ENST00000568238 GNL3LQ9NVN8 582 aaKnown RBP15.99■□□□□ 0.15
TSC2-220ENST00000568238 TMOD2Q9NZR1 351 aa15.99■□□□□ 0.15
TSC2-220ENST00000568238 HTTP42858 3142 aa15.99■□□□□ 0.15
TSC2-220ENST00000568238 MANSC4A6NHS7 340 aaPredicted RBP15.98■□□□□ 0.15
TSC2-220ENST00000568238 SRGAP3O43295 1099 aa15.98■□□□□ 0.15
TSC2-220ENST00000568238 TBC1D8O95759 1140 aa15.98■□□□□ 0.15
TSC2-220ENST00000568238 CDAN1Q8IWY9 1227 aa15.98■□□□□ 0.15
TSC2-220ENST00000568238 FTSJ3Q8IY81 847 aaKnown RBP15.98■□□□□ 0.15
TSC2-220ENST00000568238 ANKRD13AQ8IZ07 590 aa15.98■□□□□ 0.15
TSC2-220ENST00000568238 TEPSINQ96N21 525 aa15.98■□□□□ 0.15
TSC2-220ENST00000568238 MRIQ9BWK5 157 aa15.98■□□□□ 0.15
TSC2-220ENST00000568238 MYH2Q9UKX2 1941 aa15.98■□□□□ 0.15
TSC2-220ENST00000568238 USP2O75604 605 aaPredicted RBP15.97■□□□□ 0.15
TSC2-220ENST00000568238 CACNB3P54284 484 aa15.97■□□□□ 0.15
TSC2-220ENST00000568238 MTX1Q13505 466 aa15.97■□□□□ 0.15
TSC2-220ENST00000568238 HHIPL2Q6UWX4 724 aa15.97■□□□□ 0.15
TSC2-220ENST00000568238 CTU1Q7Z7A3 348 aaKnown RBP15.97■□□□□ 0.15
TSC2-220ENST00000568238 AK9Q5TCS8 1911 aa15.97■□□□□ 0.15
TSC2-220ENST00000568238 SEMA3EO15041 775 aa15.96■□□□□ 0.15
TSC2-220ENST00000568238 TNRC18O15417 2968 aaPredicted RBP15.96■□□□□ 0.15
TSC2-220ENST00000568238 ALDH1A1P00352 501 aa15.96■□□□□ 0.15
TSC2-220ENST00000568238 GNAI2P04899 355 aa15.96■□□□□ 0.15
TSC2-220ENST00000568238 PHKA1P46020 1223 aa15.96■□□□□ 0.15
TSC2-220ENST00000568238 INHBEP58166 350 aa15.96■□□□□ 0.15
TSC2-220ENST00000568238 NOM1Q5C9Z4 860 aaKnown RBP15.96■□□□□ 0.15
TSC2-220ENST00000568238 FKBP1CQ5VVH2 108 aa15.96■□□□□ 0.15
TSC2-220ENST00000568238 APOBEC3HQ6NTF7 200 aaKnown RBP15.96■□□□□ 0.15
TSC2-220ENST00000568238 CFHR5Q9BXR6 569 aa15.96■□□□□ 0.15
TSC2-220ENST00000568238 DENND2AQ9ULE3 1009 aa15.96■□□□□ 0.15
TSC2-220ENST00000568238 RPAP1Q9BWH6 1393 aaPredicted RBP15.96■□□□□ 0.15
TSC2-220ENST00000568238 CENPFP49454 3210 aa15.96■□□□□ 0.14
TSC2-220ENST00000568238 RLBP1P12271 317 aa15.95■□□□□ 0.14
TSC2-220ENST00000568238 ADORA1P30542 326 aa15.95■□□□□ 0.14
TSC2-220ENST00000568238 FAM83AQ86UY5 434 aa15.95■□□□□ 0.14
TSC2-220ENST00000568238 TMEM57Q8N5G2 664 aa15.95■□□□□ 0.14
TSC2-220ENST00000568238 PANK1Q8TE04 598 aa15.95■□□□□ 0.14
TSC2-220ENST00000568238 ZNF296Q8WUU4 475 aaPredicted RBP15.95■□□□□ 0.14
TSC2-220ENST00000568238 ELP3Q9H9T3 547 aa15.95■□□□□ 0.14
TSC2-220ENST00000568238 SALL1Q9NSC2 1324 aa15.94■□□□□ 0.14
TSC2-220ENST00000568238 DOCK2Q92608 1830 aa15.94■□□□□ 0.14
TSC2-220ENST00000568238 GPR25O00155 361 aa15.94■□□□□ 0.14
TSC2-220ENST00000568238 LDHBP07195 334 aaKnown RBP15.94■□□□□ 0.14
TSC2-220ENST00000568238 PRDX5P30044 214 aa15.94■□□□□ 0.14
TSC2-220ENST00000568238 GJA5P36382 358 aa15.94■□□□□ 0.14
TSC2-220ENST00000568238 DIXDC1Q155Q3 683 aa15.94■□□□□ 0.14
TSC2-220ENST00000568238 CCDC102BQ68D86 513 aa15.94■□□□□ 0.14
TSC2-220ENST00000568238 IFNL1Q8IU54 200 aa15.94■□□□□ 0.14
TSC2-220ENST00000568238 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.94■□□□□ 0.14
TSC2-220ENST00000568238 OPTNQ96CV9 577 aa15.94■□□□□ 0.14
TSC2-220ENST00000568238 AKAP2Q9Y2D5 859 aa15.94■□□□□ 0.14
TSC2-220ENST00000568238 CSADQ9Y600 493 aa15.94■□□□□ 0.14
TSC2-220ENST00000568238 ZBTB22O15209 634 aa15.93■□□□□ 0.14
TSC2-220ENST00000568238 VGLL4Q14135 290 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms