RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 SRSF11Q05519 484 aaKnown RBP7.91□□□□□ -1.14
CAPN3-218ENST00000568153 ARSJQ5FYB0 599 aaPredicted RBP7.91□□□□□ -1.14
CAPN3-218ENST00000568153 C1orf53Q5VUE5 145 aa7.91□□□□□ -1.14
CAPN3-218ENST00000568153 BRINP3Q76B58 766 aa7.91□□□□□ -1.14
CAPN3-218ENST00000568153 PGBD3Q8N328 593 aa7.91□□□□□ -1.14
CAPN3-218ENST00000568153 DDX17Q92841 729 aaKnown RBP7.91□□□□□ -1.14
CAPN3-218ENST00000568153 VTI1AQ96AJ9 217 aa7.91□□□□□ -1.14
CAPN3-218ENST00000568153 TRERF1Q96PN7 1200 aa7.91□□□□□ -1.14
CAPN3-218ENST00000568153 ZIC5Q96T25 663 aa7.91□□□□□ -1.14
CAPN3-218ENST00000568153 MBIPQ9NS73 344 aa7.91□□□□□ -1.14
CAPN3-218ENST00000568153 MST1RQ04912 1400 aa7.91□□□□□ -1.14
CAPN3-218ENST00000568153 CDK12Q9NYV4 1490 aaPredicted RBP7.91□□□□□ -1.14
CAPN3-218ENST00000568153 FMN2Q9NZ56 1722 aa7.91□□□□□ -1.14
CAPN3-218ENST00000568153 A0A1W2PNR3 127 aa7.9□□□□□ -1.14
CAPN3-218ENST00000568153 GNAI1P63096 354 aa7.9□□□□□ -1.14
CAPN3-218ENST00000568153 ZNF385CQ66K41 422 aaPredicted RBP7.9□□□□□ -1.14
CAPN3-218ENST00000568153 BICDL1Q6ZP65 573 aa7.9□□□□□ -1.14
CAPN3-218ENST00000568153 AEBP1Q8IUX7 1158 aa7.9□□□□□ -1.14
CAPN3-218ENST00000568153 RHPN1Q8TCX5 695 aa7.9□□□□□ -1.14
CAPN3-218ENST00000568153 WHAMMQ8TF30 809 aa7.9□□□□□ -1.14
CAPN3-218ENST00000568153 COL26A1Q96A83 441 aa7.9□□□□□ -1.14
CAPN3-218ENST00000568153 NDFIP2Q9NV92 336 aa7.9□□□□□ -1.14
CAPN3-218ENST00000568153 LAS1LQ9Y4W2 734 aaKnown RBP7.9□□□□□ -1.14
CAPN3-218ENST00000568153 AKAP12Q02952 1782 aa7.89□□□□□ -1.15
CAPN3-218ENST00000568153 TOPAZ1Q8N9V7 1692 aa7.89□□□□□ -1.15
CAPN3-218ENST00000568153 SPATA31A3Q5VYP0 1347 aa7.89□□□□□ -1.15
CAPN3-218ENST00000568153 FAM181BA6NEQ2 426 aa7.89□□□□□ -1.15
CAPN3-218ENST00000568153 HTATSF1O43719 755 aaKnown RBP7.89□□□□□ -1.15
CAPN3-218ENST00000568153 PLIN1O60240 522 aa7.89□□□□□ -1.15
CAPN3-218ENST00000568153 ZC3H6P61129 1189 aaKnown RBP7.89□□□□□ -1.15
CAPN3-218ENST00000568153 NAA30Q147X3 362 aaPredicted RBP7.89□□□□□ -1.15
CAPN3-218ENST00000568153 RTN1Q16799 776 aa7.89□□□□□ -1.15
CAPN3-218ENST00000568153 EFHC2Q5JST6 749 aa7.89□□□□□ -1.15
CAPN3-218ENST00000568153 RTF1Q92541 710 aaKnown RBP7.89□□□□□ -1.15
CAPN3-218ENST00000568153 CFHR5Q9BXR6 569 aa7.89□□□□□ -1.15
CAPN3-218ENST00000568153 SEPT3Q9UH03 358 aa7.89□□□□□ -1.15
CAPN3-218ENST00000568153 MON2Q7Z3U7 1717 aa7.89□□□□□ -1.15
CAPN3-218ENST00000568153 LRRC7Q96NW7 1537 aa7.88□□□□□ -1.15
CAPN3-218ENST00000568153 ARHGEF10O15013 1369 aa7.88□□□□□ -1.15
CAPN3-218ENST00000568153 USP19O94966 1318 aa7.88□□□□□ -1.15
CAPN3-218ENST00000568153 IGSF1Q8N6C5 1336 aa7.88□□□□□ -1.15
CAPN3-218ENST00000568153 KIF20BQ96Q89 1820 aa7.88□□□□□ -1.15
CAPN3-218ENST00000568153 PTCD1O75127 700 aaKnown RBP7.88□□□□□ -1.15
CAPN3-218ENST00000568153 BCAR3O75815 825 aa7.88□□□□□ -1.15
CAPN3-218ENST00000568153 RARSP54136 660 aaKnown RBP7.88□□□□□ -1.15
CAPN3-218ENST00000568153 EXOSC9Q06265 439 aaKnown RBP7.88□□□□□ -1.15
CAPN3-218ENST00000568153 MTHFSDQ2M296 383 aaKnown RBP7.88□□□□□ -1.15
CAPN3-218ENST00000568153 NBPF6Q5VWK0 638 aa7.88□□□□□ -1.15
CAPN3-218ENST00000568153 MYO19Q96H55 970 aa7.88□□□□□ -1.15
CAPN3-218ENST00000568153 NBPF4Q96M43 638 aa7.88□□□□□ -1.15
CAPN3-218ENST00000568153 TRAIPQ9BWF2 469 aa7.88□□□□□ -1.15
CAPN3-218ENST00000568153 SAP130Q9H0E3 1048 aa7.88□□□□□ -1.15
CAPN3-218ENST00000568153 IFT57Q9NWB7 429 aa7.88□□□□□ -1.15
CAPN3-218ENST00000568153 LRFN2Q9ULH4 789 aa7.88□□□□□ -1.15
CAPN3-218ENST00000568153 ITSN1Q15811 1721 aa7.88□□□□□ -1.15
CAPN3-218ENST00000568153 RTL1A6NKG5 1358 aa7.87□□□□□ -1.15
CAPN3-218ENST00000568153 NALCNQ8IZF0 1738 aa7.87□□□□□ -1.15
CAPN3-218ENST00000568153 ANKRD26Q9UPS8 1709 aa7.87□□□□□ -1.15
CAPN3-218ENST00000568153 ZNF853P0CG23 659 aa7.87□□□□□ -1.15
CAPN3-218ENST00000568153 COX20Q5RI15 118 aa7.87□□□□□ -1.15
CAPN3-218ENST00000568153 B4GALNT3Q6L9W6 998 aa7.87□□□□□ -1.15
CAPN3-218ENST00000568153 NLRP8Q86W28 1048 aa7.87□□□□□ -1.15
CAPN3-218ENST00000568153 ZNF280CQ8ND82 737 aa7.87□□□□□ -1.15
CAPN3-218ENST00000568153 EXOC6Q8TAG9 804 aa7.87□□□□□ -1.15
CAPN3-218ENST00000568153 ANKRD24Q8TF21 1146 aa7.87□□□□□ -1.15
CAPN3-218ENST00000568153 TSR2Q969E8 191 aaKnown RBP7.87□□□□□ -1.15
CAPN3-218ENST00000568153 HSH2DQ96JZ2 352 aa7.87□□□□□ -1.15
CAPN3-218ENST00000568153 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.87□□□□□ -1.15
CAPN3-218ENST00000568153 KLK14Q9P0G3 267 aa7.87□□□□□ -1.15
CAPN3-218ENST00000568153 GPC6Q9Y625 555 aaPredicted RBP7.87□□□□□ -1.15
CAPN3-218ENST00000568153 SHPRHQ149N8 1683 aa7.86□□□□□ -1.15
CAPN3-218ENST00000568153 FANCIQ9NVI1 1328 aa7.86□□□□□ -1.15
CAPN3-218ENST00000568153 CHL1O00533 1208 aa7.86□□□□□ -1.15
CAPN3-218ENST00000568153 BNIP3LO60238 219 aa7.86□□□□□ -1.15
CAPN3-218ENST00000568153 ARHGEF15O94989 841 aa7.86□□□□□ -1.15
CAPN3-218ENST00000568153 MX2P20592 715 aa7.86□□□□□ -1.15
CAPN3-218ENST00000568153 DGKZQ13574 1117 aa7.86□□□□□ -1.15
CAPN3-218ENST00000568153 PLEKHO1Q53GL0 409 aaPredicted RBP7.86□□□□□ -1.15
CAPN3-218ENST00000568153 C16orf46Q6P387 395 aa7.86□□□□□ -1.15
CAPN3-218ENST00000568153 LRRC69Q6ZNQ3 347 aa7.86□□□□□ -1.15
CAPN3-218ENST00000568153 ZNF428Q96B54 188 aa7.86□□□□□ -1.15
CAPN3-218ENST00000568153 ABHD17AQ96GS6 310 aa7.86□□□□□ -1.15
CAPN3-218ENST00000568153 SUSD3Q96L08 255 aa7.86□□□□□ -1.15
CAPN3-218ENST00000568153 THUMPD2Q9BTF0 503 aaKnown RBP7.86□□□□□ -1.15
CAPN3-218ENST00000568153 ZCCHC2Q9C0B9 1178 aaKnown RBP7.86□□□□□ -1.15
CAPN3-218ENST00000568153 HCN2Q9UL51 889 aa7.86□□□□□ -1.15
CAPN3-218ENST00000568153 ATXN7L1Q9ULK2 861 aaPredicted RBP7.86□□□□□ -1.15
CAPN3-218ENST00000568153 BCS1LQ9Y276 419 aa7.86□□□□□ -1.15
CAPN3-218ENST00000568153 IQSEC2Q5JU85 1478 aa7.86□□□□□ -1.15
CAPN3-218ENST00000568153 RGPD8O14715 1765 aaPredicted RBP7.85□□□□□ -1.15
CAPN3-218ENST00000568153 STRCQ7RTU9 1775 aa7.85□□□□□ -1.15
CAPN3-218ENST00000568153 FAM83GA6ND36 823 aa7.85□□□□□ -1.15
CAPN3-218ENST00000568153 GNAT3A8MTJ3 354 aa7.85□□□□□ -1.15
CAPN3-218ENST00000568153 CANXP27824 592 aaKnown RBP7.85□□□□□ -1.15
CAPN3-218ENST00000568153 DCTN1Q14203 1278 aa7.85□□□□□ -1.15
CAPN3-218ENST00000568153 PDE3AQ14432 1141 aa7.85□□□□□ -1.15
CAPN3-218ENST00000568153 AMOTQ4VCS5 1084 aa7.85□□□□□ -1.15
CAPN3-218ENST00000568153 FIGNL1Q6PIW4 674 aa7.85□□□□□ -1.15
CAPN3-218ENST00000568153 LYPD4Q6UWN0 246 aa7.85□□□□□ -1.15
CAPN3-218ENST00000568153 MCM10Q7L590 875 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms