RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 ZNF157P51786 506 aaPredicted RBP6.79□□□□□ -1.32
HERPUD1-212ENST00000567944 FAM117BQ6P1L5 589 aa6.79□□□□□ -1.32
HERPUD1-212ENST00000567944 IGF2-ASQ6U949 168 aa6.79□□□□□ -1.32
HERPUD1-212ENST00000567944 ZNF428Q96B54 188 aa6.79□□□□□ -1.32
HERPUD1-212ENST00000567944 LENG1Q96BZ8 264 aaPredicted RBP6.79□□□□□ -1.32
HERPUD1-212ENST00000567944 FAM177BA6PVY3 158 aa6.78□□□□□ -1.32
HERPUD1-212ENST00000567944 C1QTNF9BB2RNN3 333 aa6.78□□□□□ -1.32
HERPUD1-212ENST00000567944 ENC1O14682 589 aa6.78□□□□□ -1.32
HERPUD1-212ENST00000567944 SORBS3O60504 671 aa6.78□□□□□ -1.32
HERPUD1-212ENST00000567944 FBXO24O75426 580 aa6.78□□□□□ -1.32
HERPUD1-212ENST00000567944 ECEL1O95672 775 aa6.78□□□□□ -1.32
HERPUD1-212ENST00000567944 CTSBP07858 339 aa6.78□□□□□ -1.32
HERPUD1-212ENST00000567944 MEI1Q5TIA1 1274 aa6.78□□□□□ -1.32
HERPUD1-212ENST00000567944 KIAA1211Q6ZU35 1233 aa6.78□□□□□ -1.32
HERPUD1-212ENST00000567944 STK35Q8TDR2 534 aa6.78□□□□□ -1.32
HERPUD1-212ENST00000567944 UBASH3BQ8TF42 649 aa6.78□□□□□ -1.32
HERPUD1-212ENST00000567944 KIAA1522Q9P206 1035 aaPredicted RBP6.78□□□□□ -1.32
HERPUD1-212ENST00000567944 PPM1HQ9ULR3 514 aa6.78□□□□□ -1.32
HERPUD1-212ENST00000567944 PAGE1O75459 146 aa6.77□□□□□ -1.33
HERPUD1-212ENST00000567944 NLRP12P59046 1061 aa6.77□□□□□ -1.33
HERPUD1-212ENST00000567944 GSTM4Q03013 218 aa6.77□□□□□ -1.33
HERPUD1-212ENST00000567944 ADGRE1Q14246 886 aa6.77□□□□□ -1.33
HERPUD1-212ENST00000567944 RASIP1Q5U651 963 aa6.77□□□□□ -1.33
HERPUD1-212ENST00000567944 TPTE2Q6XPS3 522 aa6.77□□□□□ -1.33
HERPUD1-212ENST00000567944 NECAB3Q96P71 396 aaPredicted RBP6.77□□□□□ -1.33
HERPUD1-212ENST00000567944 ZFYVE1Q9HBF4 777 aa6.77□□□□□ -1.33
HERPUD1-212ENST00000567944 MBTPS1Q14703 1052 aa6.76□□□□□ -1.33
HERPUD1-212ENST00000567944 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.76□□□□□ -1.33
HERPUD1-212ENST00000567944 TMEM130Q8N3G9 435 aa6.76□□□□□ -1.33
HERPUD1-212ENST00000567944 TMEM39AQ9NV64 488 aa6.76□□□□□ -1.33
HERPUD1-212ENST00000567944 USP31Q70CQ4 1352 aa6.76□□□□□ -1.33
HERPUD1-212ENST00000567944 LOC100289279A0A1B0GTE1 492 aa6.75□□□□□ -1.33
HERPUD1-212ENST00000567944 F8W735 103 aaPredicted RBP6.75□□□□□ -1.33
HERPUD1-212ENST00000567944 ALX3O95076 343 aa6.75□□□□□ -1.33
HERPUD1-212ENST00000567944 CELA3AP09093 270 aa6.75□□□□□ -1.33
HERPUD1-212ENST00000567944 ARL4DP49703 201 aa6.75□□□□□ -1.33
HERPUD1-212ENST00000567944 PDZD3Q86UT5 571 aa6.75□□□□□ -1.33
HERPUD1-212ENST00000567944 AGGF1Q8N302 714 aaeCLIP6.75□□□□□ -1.33
HERPUD1-212ENST00000567944 CRELD1Q96HD1 420 aa6.75□□□□□ -1.33
HERPUD1-212ENST00000567944 MRPL18Q9H0U6 180 aaKnown RBP6.75□□□□□ -1.33
HERPUD1-212ENST00000567944 VTI1BQ9UEU0 232 aa6.75□□□□□ -1.33
HERPUD1-212ENST00000567944 C9orf172C9J069 976 aa6.74□□□□□ -1.33
HERPUD1-212ENST00000567944 BMP6P22004 513 aa6.74□□□□□ -1.33
HERPUD1-212ENST00000567944 MAOBP27338 520 aa6.74□□□□□ -1.33
HERPUD1-212ENST00000567944 NOS3P29474 1203 aa6.74□□□□□ -1.33
HERPUD1-212ENST00000567944 Q6ZS46 218 aa6.74□□□□□ -1.33
HERPUD1-212ENST00000567944 MRS2Q9HD23 443 aa6.74□□□□□ -1.33
HERPUD1-212ENST00000567944 GPN3Q9UHW5 284 aaPredicted RBP6.74□□□□□ -1.33
HERPUD1-212ENST00000567944 APBA3O96018 575 aa6.73□□□□□ -1.33
HERPUD1-212ENST00000567944 VAMP1P23763 118 aa6.73□□□□□ -1.33
HERPUD1-212ENST00000567944 ITGB7P26010 798 aa6.73□□□□□ -1.33
HERPUD1-212ENST00000567944 ST13P50502 369 aaKnown RBP6.73□□□□□ -1.33
HERPUD1-212ENST00000567944 TAF1CQ15572 869 aaPredicted RBP6.73□□□□□ -1.33
HERPUD1-212ENST00000567944 DUOXA2Q1HG44 320 aa6.73□□□□□ -1.33
HERPUD1-212ENST00000567944 DCAF11Q8TEB1 546 aa6.73□□□□□ -1.33
HERPUD1-212ENST00000567944 WFDC12Q8WWY7 111 aa6.73□□□□□ -1.33
HERPUD1-212ENST00000567944 NACC1Q96RE7 527 aa6.73□□□□□ -1.33
HERPUD1-212ENST00000567944 SSBP4Q9BWG4 385 aaPredicted RBP6.73□□□□□ -1.33
HERPUD1-212ENST00000567944 BACH2Q9BYV9 841 aa6.73□□□□□ -1.33
HERPUD1-212ENST00000567944 CEP44Q9C0F1 390 aa6.73□□□□□ -1.33
HERPUD1-212ENST00000567944 TTF2Q9UNY4 1162 aaKnown RBP6.73□□□□□ -1.33
HERPUD1-212ENST00000567944 RECKO95980 971 aa6.72□□□□□ -1.33
HERPUD1-212ENST00000567944 CYP11A1P05108 521 aa6.72□□□□□ -1.33
HERPUD1-212ENST00000567944 NRG1Q02297 640 aaPredicted RBP6.72□□□□□ -1.33
HERPUD1-212ENST00000567944 ZNF252P-AS1Q0IIN9 211 aa6.72□□□□□ -1.33
HERPUD1-212ENST00000567944 POU4F3Q15319 338 aa6.72□□□□□ -1.33
HERPUD1-212ENST00000567944 LCE3BQ5TA77 95 aa6.72□□□□□ -1.33
HERPUD1-212ENST00000567944 MPRIPQ6WCQ1 1025 aa6.72□□□□□ -1.33
HERPUD1-212ENST00000567944 ACAD11Q709F0 780 aa6.72□□□□□ -1.33
HERPUD1-212ENST00000567944 SV2BQ7L1I2 683 aa6.72□□□□□ -1.33
HERPUD1-212ENST00000567944 SULF2Q8IWU5 870 aa6.72□□□□□ -1.33
HERPUD1-212ENST00000567944 GRIN3AQ8TCU5 1115 aa6.72□□□□□ -1.33
HERPUD1-212ENST00000567944 MRRFQ96E11 262 aaKnown RBP6.72□□□□□ -1.33
HERPUD1-212ENST00000567944 USP26Q9BXU7 913 aa6.72□□□□□ -1.33
HERPUD1-212ENST00000567944 TMPRSS13Q9BYE2 586 aa6.72□□□□□ -1.33
HERPUD1-212ENST00000567944 AKTIPQ9H8T0 292 aa6.72□□□□□ -1.33
HERPUD1-212ENST00000567944 CACNA2D2Q9NY47 1150 aa6.72□□□□□ -1.33
HERPUD1-212ENST00000567944 USP21Q9UK80 565 aa6.72□□□□□ -1.33
HERPUD1-212ENST00000567944 MEGF11A6BM72 1044 aa6.71□□□□□ -1.34
HERPUD1-212ENST00000567944 NME2P22392 152 aa6.71□□□□□ -1.34
HERPUD1-212ENST00000567944 ARNTP27540 789 aa6.71□□□□□ -1.34
HERPUD1-212ENST00000567944 IREB2P48200 963 aaKnown RBP6.71□□□□□ -1.34
HERPUD1-212ENST00000567944 PPP2R3AQ06190 1150 aa6.71□□□□□ -1.34
HERPUD1-212ENST00000567944 AP3B2Q13367 1082 aa6.71□□□□□ -1.34
HERPUD1-212ENST00000567944 TXNRD3Q86VQ6 643 aa6.71□□□□□ -1.34
HERPUD1-212ENST00000567944 WDR89Q96FK6 387 aaPredicted RBP6.71□□□□□ -1.34
HERPUD1-212ENST00000567944 MEGF10Q96KG7 1140 aa6.71□□□□□ -1.34
HERPUD1-212ENST00000567944 UBL7Q96S82 380 aaPredicted RBP6.71□□□□□ -1.34
HERPUD1-212ENST00000567944 CCDC86Q9H6F5 360 aaKnown RBP6.71□□□□□ -1.34
HERPUD1-212ENST00000567944 ZNF862O60290 1169 aa6.7□□□□□ -1.34
HERPUD1-212ENST00000567944 GSTP1P09211 210 aaKnown RBP6.7□□□□□ -1.34
HERPUD1-212ENST00000567944 CCDC85BQ15834 202 aaPredicted RBP6.7□□□□□ -1.34
HERPUD1-212ENST00000567944 DZIP1LQ8IYY4 767 aaKnown RBP6.7□□□□□ -1.34
HERPUD1-212ENST00000567944 NOC4LQ9BVI4 516 aaKnown RBP6.7□□□□□ -1.34
HERPUD1-212ENST00000567944 EIF4EBP3O60516 100 aaPredicted RBP6.69□□□□□ -1.34
HERPUD1-212ENST00000567944 EXOSC6Q5RKV6 272 aaKnown RBP6.69□□□□□ -1.34
HERPUD1-212ENST00000567944 PCNX4Q63HM2 1172 aa6.69□□□□□ -1.34
HERPUD1-212ENST00000567944 DDX54Q8TDD1 881 aaKnown RBP6.69□□□□□ -1.34
HERPUD1-212ENST00000567944 CORO1BQ9BR76 489 aa6.69□□□□□ -1.34
HERPUD1-212ENST00000567944 RUSC1Q9BVN2 902 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms