RNA–Protein interactions for RNA: ENST00000567880.5

TCF4-236, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-236ENST00000567880 CC2D2BQ6DHV5 1058 aa12.54□□□□□ -0.4
TCF4-236ENST00000567880 PUS7LQ9H0K6 701 aaKnown RBP12.54□□□□□ -0.4
TCF4-236ENST00000567880 CD2APQ9Y5K6 639 aa12.54□□□□□ -0.4
TCF4-236ENST00000567880 PDS5AQ29RF7 1337 aaKnown RBP12.54□□□□□ -0.4
TCF4-236ENST00000567880 SCN9AQ15858 1988 aa12.53□□□□□ -0.4
TCF4-236ENST00000567880 IL1R1P14778 569 aa12.53□□□□□ -0.4
TCF4-236ENST00000567880 MCCP23508 829 aa12.53□□□□□ -0.4
TCF4-236ENST00000567880 CCDC93Q567U6 631 aa12.53□□□□□ -0.4
TCF4-236ENST00000567880 FBXW7Q969H0 707 aa12.53□□□□□ -0.4
TCF4-236ENST00000567880 COA1Q9GZY4 146 aa12.53□□□□□ -0.4
TCF4-236ENST00000567880 RAD21O60216 631 aa12.52□□□□□ -0.4
TCF4-236ENST00000567880 PRDX5P30044 214 aa12.52□□□□□ -0.4
TCF4-236ENST00000567880 UBE3CQ15386 1083 aa12.52□□□□□ -0.4
TCF4-236ENST00000567880 DALRD3Q5D0E6 543 aaKnown RBP12.52□□□□□ -0.4
TCF4-236ENST00000567880 WDR66Q8TBY9 1149 aa12.52□□□□□ -0.4
TCF4-236ENST00000567880 DBNDD1Q9H9R9 158 aa12.52□□□□□ -0.4
TCF4-236ENST00000567880 SNED1Q8TER0 1413 aa12.52□□□□□ -0.4
TCF4-236ENST00000567880 FER1L6Q2WGJ9 1857 aa12.52□□□□□ -0.41
TCF4-236ENST00000567880 TCRBV5S4A2TA0A5A2 114 aa12.52□□□□□ -0.41
TCF4-236ENST00000567880 AOC3Q16853 763 aa12.52□□□□□ -0.41
TCF4-236ENST00000567880 SAMD1Q6SPF0 538 aaPredicted RBP12.52□□□□□ -0.41
TCF4-236ENST00000567880 RGS22Q8NE09 1264 aa12.52□□□□□ -0.41
TCF4-236ENST00000567880 RBM8AQ9Y5S9 174 aaKnown RBP12.52□□□□□ -0.41
TCF4-236ENST00000567880 GPAA1O43292 621 aa12.51□□□□□ -0.41
TCF4-236ENST00000567880 CYP7A1P22680 504 aa12.51□□□□□ -0.41
TCF4-236ENST00000567880 HSPA4P34932 840 aa12.51□□□□□ -0.41
TCF4-236ENST00000567880 GTF2IP78347 998 aa12.51□□□□□ -0.41
TCF4-236ENST00000567880 VPS53Q5VIR6 699 aa12.51□□□□□ -0.41
TCF4-236ENST00000567880 RTKN2Q8IZC4 609 aa12.51□□□□□ -0.41
TCF4-236ENST00000567880 ZGPATQ8N5A5 531 aaKnown RBP12.51□□□□□ -0.41
TCF4-236ENST00000567880 NLGN2Q8NFZ4 835 aa12.51□□□□□ -0.41
TCF4-236ENST00000567880 MAP4K1Q92918 833 aa12.51□□□□□ -0.41
TCF4-236ENST00000567880 AIDAQ96BJ3 306 aa12.51□□□□□ -0.41
TCF4-236ENST00000567880 KIF2CQ99661 725 aa12.51□□□□□ -0.41
TCF4-236ENST00000567880 RTFDC1Q9BY42 306 aaPredicted RBP12.51□□□□□ -0.41
TCF4-236ENST00000567880 PALD1Q9ULE6 856 aa12.51□□□□□ -0.41
TCF4-236ENST00000567880 BCS1LQ9Y276 419 aa12.51□□□□□ -0.41
TCF4-236ENST00000567880 ARFGEF1Q9Y6D6 1849 aa12.51□□□□□ -0.41
TCF4-236ENST00000567880 EPB41L2O43491 1005 aaKnown RBP12.5□□□□□ -0.41
TCF4-236ENST00000567880 MECOMQ03112 1051 aa12.5□□□□□ -0.41
TCF4-236ENST00000567880 SPTY2D1Q68D10 685 aaPredicted RBP12.5□□□□□ -0.41
TCF4-236ENST00000567880 NAA16Q6N069 864 aaPredicted RBP12.5□□□□□ -0.41
TCF4-236ENST00000567880 DZIP1Q86YF9 867 aaKnown RBP12.5□□□□□ -0.41
TCF4-236ENST00000567880 MIGA1Q8NAN2 632 aa12.5□□□□□ -0.41
TCF4-236ENST00000567880 SUPT20HQ8NEM7 779 aa12.5□□□□□ -0.41
TCF4-236ENST00000567880 PPIP5K2O43314 1243 aa12.5□□□□□ -0.41
TCF4-236ENST00000567880 LDHBP07195 334 aaKnown RBP12.5□□□□□ -0.41
TCF4-236ENST00000567880 HSPD1P10809 573 aaKnown RBP12.5□□□□□ -0.41
TCF4-236ENST00000567880 MFSD14BQ5SR56 506 aa12.5□□□□□ -0.41
TCF4-236ENST00000567880 ADGRA1Q86SQ6 560 aa12.5□□□□□ -0.41
TCF4-236ENST00000567880 SALL1Q9NSC2 1324 aa12.5□□□□□ -0.41
TCF4-236ENST00000567880 BAZ2AQ9UIF9 1905 aaKnown RBP12.5□□□□□ -0.41
TCF4-236ENST00000567880 MBD4O95243 580 aa12.49□□□□□ -0.41
TCF4-236ENST00000567880 GRIK5Q16478 980 aa12.49□□□□□ -0.41
TCF4-236ENST00000567880 GRIPAP1Q4V328 841 aa12.49□□□□□ -0.41
TCF4-236ENST00000567880 SOGA3Q5TF21 947 aa12.49□□□□□ -0.41
TCF4-236ENST00000567880 ZNF384Q8TF68 577 aa12.49□□□□□ -0.41
TCF4-236ENST00000567880 NSUN4Q96CB9 384 aaKnown RBP12.49□□□□□ -0.41
TCF4-236ENST00000567880 ARMT1Q9H993 441 aa12.49□□□□□ -0.41
TCF4-236ENST00000567880 SRCAPQ6ZRS2 3230 aa12.49□□□□□ -0.41
TCF4-236ENST00000567880 ECE2O60344 883 aa12.49□□□□□ -0.41
TCF4-236ENST00000567880 KIAA2012Q0VF49 1180 aa12.49□□□□□ -0.41
TCF4-236ENST00000567880 TTLL5Q6EMB2 1281 aa12.49□□□□□ -0.41
TCF4-236ENST00000567880 DDRGK1Q96HY6 314 aa12.49□□□□□ -0.41
TCF4-236ENST00000567880 PSMD1Q99460 953 aa12.49□□□□□ -0.41
TCF4-236ENST00000567880 DSCC1Q9BVC3 393 aa12.49□□□□□ -0.41
TCF4-236ENST00000567880 ZNF277Q9NRM2 450 aaPredicted RBP12.49□□□□□ -0.41
TCF4-236ENST00000567880 ZNF646O15015 1829 aaPredicted RBP12.48□□□□□ -0.41
TCF4-236ENST00000567880 PSME4Q14997 1843 aa12.48□□□□□ -0.41
TCF4-236ENST00000567880 LAMA4Q16363 1823 aa12.48□□□□□ -0.41
TCF4-236ENST00000567880 FAM205AQ6ZU69 1335 aa12.48□□□□□ -0.41
TCF4-236ENST00000567880 APPP05067 770 aa12.48□□□□□ -0.41
TCF4-236ENST00000567880 NECTIN1Q15223 517 aa12.48□□□□□ -0.41
TCF4-236ENST00000567880 CREB3L3Q68CJ9 461 aa12.48□□□□□ -0.41
TCF4-236ENST00000567880 PODNQ7Z5L7 613 aa12.48□□□□□ -0.41
TCF4-236ENST00000567880 RASEFQ8IZ41 740 aa12.48□□□□□ -0.41
TCF4-236ENST00000567880 LCORLQ8N3X6 602 aa12.48□□□□□ -0.41
TCF4-236ENST00000567880 TBC1D22AQ8WUA7 517 aa12.48□□□□□ -0.41
TCF4-236ENST00000567880 FHDC1Q9C0D6 1143 aaPredicted RBP12.48□□□□□ -0.41
TCF4-236ENST00000567880 KCNQ5Q9NR82 932 aa12.48□□□□□ -0.41
TCF4-236ENST00000567880 SNX14Q9Y5W7 946 aa12.48□□□□□ -0.41
TCF4-236ENST00000567880 U3KPZ7 1027 aaPredicted RBP12.48□□□□□ -0.41
TCF4-236ENST00000567880 MAGEB6P1A0A0J9YX57 407 aa12.47□□□□□ -0.41
TCF4-236ENST00000567880 HMGB1P09429 215 aaKnown RBP12.47□□□□□ -0.41
TCF4-236ENST00000567880 RNF20Q5VTR2 975 aa12.47□□□□□ -0.41
TCF4-236ENST00000567880 LARGE2Q8N3Y3 721 aa12.47□□□□□ -0.41
TCF4-236ENST00000567880 IPO9Q96P70 1041 aaKnown RBP12.47□□□□□ -0.41
TCF4-236ENST00000567880 STRBPQ96SI9 672 aaKnown RBP12.47□□□□□ -0.41
TCF4-236ENST00000567880 MXD3Q9BW11 206 aa12.47□□□□□ -0.41
TCF4-236ENST00000567880 CDK5RAP2Q96SN8 1893 aa12.47□□□□□ -0.41
TCF4-236ENST00000567880 F8W031 263 aaPredicted RBP12.47□□□□□ -0.41
TCF4-236ENST00000567880 SLC27A2O14975 620 aa12.47□□□□□ -0.41
TCF4-236ENST00000567880 FOXP2O15409 715 aa12.47□□□□□ -0.41
TCF4-236ENST00000567880 ZKSCAN1P17029 563 aaPredicted RBP12.47□□□□□ -0.41
TCF4-236ENST00000567880 DEKP35659 375 aaKnown RBP12.47□□□□□ -0.41
TCF4-236ENST00000567880 ANAPC15P60006 121 aa12.47□□□□□ -0.41
TCF4-236ENST00000567880 DYNLL1P63167 89 aaKnown RBP12.47□□□□□ -0.41
TCF4-236ENST00000567880 RABEP1Q15276 862 aa12.47□□□□□ -0.41
TCF4-236ENST00000567880 DIXDC1Q155Q3 683 aa12.47□□□□□ -0.41
TCF4-236ENST00000567880 TAOK3Q9H2K8 898 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms