RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 SERPINA10Q9UK55 444 aa8.61□□□□□ -1.03
SF3B3-209ENST00000567635 TTF2Q9UNY4 1162 aaKnown RBP8.61□□□□□ -1.03
SF3B3-209ENST00000567635 PCDHAC2Q9Y5I4 1007 aa8.61□□□□□ -1.03
SF3B3-209ENST00000567635 SRGAP3O43295 1099 aa8.6□□□□□ -1.03
SF3B3-209ENST00000567635 GNAI2P04899 355 aa8.6□□□□□ -1.03
SF3B3-209ENST00000567635 SLC10A3P09131 477 aa8.6□□□□□ -1.03
SF3B3-209ENST00000567635 HDLBPQ00341 1268 aaKnown RBP8.6□□□□□ -1.03
SF3B3-209ENST00000567635 KIF23Q02241 960 aaPredicted RBP8.6□□□□□ -1.03
SF3B3-209ENST00000567635 ATP2B3Q16720 1220 aa8.6□□□□□ -1.03
SF3B3-209ENST00000567635 SUPT20HL1Q3ZLR7 823 aa8.6□□□□□ -1.03
SF3B3-209ENST00000567635 REM2Q8IYK8 340 aaPredicted RBP8.6□□□□□ -1.03
SF3B3-209ENST00000567635 DZIP1LQ8IYY4 767 aaKnown RBP8.6□□□□□ -1.03
SF3B3-209ENST00000567635 COPRSQ9NQ92 184 aa8.6□□□□□ -1.03
SF3B3-209ENST00000567635 GNL3LQ9NVN8 582 aaKnown RBP8.6□□□□□ -1.03
SF3B3-209ENST00000567635 PA2G4Q9UQ80 394 aaKnown RBP8.6□□□□□ -1.03
SF3B3-209ENST00000567635 TNNQ9UQP3 1299 aa8.6□□□□□ -1.03
SF3B3-209ENST00000567635 PPP2R3BQ9Y5P8 575 aa8.6□□□□□ -1.03
SF3B3-209ENST00000567635 MYH2Q9UKX2 1941 aa8.6□□□□□ -1.03
SF3B3-209ENST00000567635 ARAP2Q8WZ64 1704 aa8.6□□□□□ -1.03
SF3B3-209ENST00000567635 ZBED9Q6R2W3 1325 aa8.59□□□□□ -1.03
SF3B3-209ENST00000567635 CLRN2A0PK11 232 aa8.59□□□□□ -1.03
SF3B3-209ENST00000567635 CRKP46108 304 aa8.59□□□□□ -1.03
SF3B3-209ENST00000567635 MTX1Q13505 466 aa8.59□□□□□ -1.03
SF3B3-209ENST00000567635 PRKG1Q13976 671 aa8.59□□□□□ -1.03
SF3B3-209ENST00000567635 GRIK5Q16478 980 aa8.59□□□□□ -1.03
SF3B3-209ENST00000567635 TMEM57Q8N5G2 664 aa8.59□□□□□ -1.03
SF3B3-209ENST00000567635 WDR66Q8TBY9 1149 aa8.59□□□□□ -1.03
SF3B3-209ENST00000567635 CSRNP1Q96S65 589 aa8.59□□□□□ -1.03
SF3B3-209ENST00000567635 TDRD3Q9H7E2 651 aaKnown RBP8.59□□□□□ -1.03
SF3B3-209ENST00000567635 VEZTQ9HBM0 779 aa8.59□□□□□ -1.03
SF3B3-209ENST00000567635 ZNF70Q9UC06 446 aaPredicted RBP8.59□□□□□ -1.03
SF3B3-209ENST00000567635 SUGT1Q9Y2Z0 365 aa8.59□□□□□ -1.03
SF3B3-209ENST00000567635 PPP1R12BO60237 982 aaPredicted RBP8.58□□□□□ -1.04
SF3B3-209ENST00000567635 TIMM10P62072 90 aa8.58□□□□□ -1.04
SF3B3-209ENST00000567635 TNFAIP1Q13829 316 aa8.58□□□□□ -1.04
SF3B3-209ENST00000567635 SPDYE2Q495Y8 402 aa8.58□□□□□ -1.04
SF3B3-209ENST00000567635 LDLRAD1Q5T700 205 aa8.58□□□□□ -1.04
SF3B3-209ENST00000567635 RASAL3Q86YV0 1011 aa8.58□□□□□ -1.04
SF3B3-209ENST00000567635 TEKT1Q969V4 418 aa8.58□□□□□ -1.04
SF3B3-209ENST00000567635 SLC10A4Q96EP9 437 aa8.58□□□□□ -1.04
SF3B3-209ENST00000567635 TSKSQ9UJT2 592 aa8.58□□□□□ -1.04
SF3B3-209ENST00000567635 ANGEL1Q9UNK9 670 aaKnown RBP8.58□□□□□ -1.04
SF3B3-209ENST00000567635 AKAP2Q9Y2D5 859 aa8.58□□□□□ -1.04
SF3B3-209ENST00000567635 COL1A1P02452 1464 aaPredicted RBP8.57□□□□□ -1.04
SF3B3-209ENST00000567635 MAST3O60307 1309 aa8.57□□□□□ -1.04
SF3B3-209ENST00000567635 AOX1Q06278 1338 aa8.57□□□□□ -1.04
SF3B3-209ENST00000567635 UNCXA6NJT0 531 aa8.57□□□□□ -1.04
SF3B3-209ENST00000567635 SEMA3EO15041 775 aa8.57□□□□□ -1.04
SF3B3-209ENST00000567635 TRPA1O75762 1119 aa8.57□□□□□ -1.04
SF3B3-209ENST00000567635 ATP8B2P98198 1209 aa8.57□□□□□ -1.04
SF3B3-209ENST00000567635 TFCP2Q12800 502 aa8.57□□□□□ -1.04
SF3B3-209ENST00000567635 G3BP1Q13283 466 aaKnown RBP eCLIP8.57□□□□□ -1.042e-8■■□□□ 14.3
SF3B3-209ENST00000567635 RASA3Q14644 834 aa8.57□□□□□ -1.04
SF3B3-209ENST00000567635 MAP3K11Q16584 847 aa8.57□□□□□ -1.04
SF3B3-209ENST00000567635 NBPF12Q5TAG4 269 aaPredicted RBP8.57□□□□□ -1.04
SF3B3-209ENST00000567635 HHIPL2Q6UWX4 724 aa8.57□□□□□ -1.04
SF3B3-209ENST00000567635 FTSJ3Q8IY81 847 aaKnown RBP8.57□□□□□ -1.04
SF3B3-209ENST00000567635 ZDHHC15Q96MV8 337 aa8.57□□□□□ -1.04
SF3B3-209ENST00000567635 RNF186Q9NXI6 227 aa8.57□□□□□ -1.04
SF3B3-209ENST00000567635 SAGE1Q9NXZ1 904 aa8.57□□□□□ -1.04
SF3B3-209ENST00000567635 DENND2AQ9ULE3 1009 aa8.57□□□□□ -1.04
SF3B3-209ENST00000567635 PNMA6EA0A0J9YXQ4 647 aa8.56□□□□□ -1.04
SF3B3-209ENST00000567635 TCP10L2B9ZVM9 353 aa8.56□□□□□ -1.04
SF3B3-209ENST00000567635 USP2O75604 605 aaPredicted RBP8.56□□□□□ -1.04
SF3B3-209ENST00000567635 LDHBP07195 334 aaKnown RBP8.56□□□□□ -1.04
SF3B3-209ENST00000567635 ADORA1P30542 326 aa8.56□□□□□ -1.04
SF3B3-209ENST00000567635 PHKA1P46020 1223 aa8.56□□□□□ -1.04
SF3B3-209ENST00000567635 TM4SF4P48230 202 aa8.56□□□□□ -1.04
SF3B3-209ENST00000567635 TNNI2P48788 182 aa8.56□□□□□ -1.04
SF3B3-209ENST00000567635 CCDC102BQ68D86 513 aa8.56□□□□□ -1.04
SF3B3-209ENST00000567635 ITPRIPQ8IWB1 547 aa8.56□□□□□ -1.04
SF3B3-209ENST00000567635 FZD1Q9UP38 647 aa8.56□□□□□ -1.04
SF3B3-209ENST00000567635 A0A1B0GUL7 405 aa8.55□□□□□ -1.04
SF3B3-209ENST00000567635 ZBTB7BO15156 539 aaPredicted RBP8.55□□□□□ -1.04
SF3B3-209ENST00000567635 RLBP1P12271 317 aa8.55□□□□□ -1.04
SF3B3-209ENST00000567635 IREB2P48200 963 aaKnown RBP8.55□□□□□ -1.04
SF3B3-209ENST00000567635 MVPQ14764 893 aaKnown RBP8.55□□□□□ -1.04
SF3B3-209ENST00000567635 GORABQ5T7V8 394 aa8.55□□□□□ -1.04
SF3B3-209ENST00000567635 FKBP1CQ5VVH2 108 aa8.55□□□□□ -1.04
SF3B3-209ENST00000567635 SPRYD7Q5W111 196 aa8.55□□□□□ -1.04
SF3B3-209ENST00000567635 APOBEC3HQ6NTF7 200 aaKnown RBP8.55□□□□□ -1.04
SF3B3-209ENST00000567635 XAGE2Q96GT9 111 aa8.55□□□□□ -1.04
SF3B3-209ENST00000567635 TEPSINQ96N21 525 aa8.55□□□□□ -1.04
SF3B3-209ENST00000567635 NEUROD6Q96NK8 337 aa8.55□□□□□ -1.04
SF3B3-209ENST00000567635 TMEM39BQ9GZU3 492 aa8.55□□□□□ -1.04
SF3B3-209ENST00000567635 TMOD2Q9NZR1 351 aa8.55□□□□□ -1.04
SF3B3-209ENST00000567635 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.55□□□□□ -1.04
SF3B3-209ENST00000567635 SALL1Q9NSC2 1324 aa8.54□□□□□ -1.04
SF3B3-209ENST00000567635 MS4A1P11836 297 aa8.54□□□□□ -1.04
SF3B3-209ENST00000567635 CACNB3P54284 484 aa8.54□□□□□ -1.04
SF3B3-209ENST00000567635 INHBEP58166 350 aa8.54□□□□□ -1.04
SF3B3-209ENST00000567635 SREBF2Q12772 1141 aa8.54□□□□□ -1.04
SF3B3-209ENST00000567635 MKRN3Q13064 507 aaKnown RBP8.54□□□□□ -1.04
SF3B3-209ENST00000567635 POLA2Q14181 598 aa8.54□□□□□ -1.04
SF3B3-209ENST00000567635 SPTY2D1Q68D10 685 aaPredicted RBP8.54□□□□□ -1.04
SF3B3-209ENST00000567635 FAM83AQ86UY5 434 aa8.54□□□□□ -1.04
SF3B3-209ENST00000567635 ANKRD13AQ8IZ07 590 aa8.54□□□□□ -1.04
SF3B3-209ENST00000567635 ZGPATQ8N5A5 531 aaKnown RBP8.54□□□□□ -1.04
SF3B3-209ENST00000567635 SSH3Q8TE77 659 aa8.54□□□□□ -1.04
SF3B3-209ENST00000567635 CLMNQ96JQ2 1002 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms