RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 NIF3L1Q9GZT8 377 aa12.94□□□□□ -0.34
UBFD1-205ENST00000566136 ABCC11Q96J66 1382 aa12.94□□□□□ -0.34
UBFD1-205ENST00000566136 TECPR2O15040 1411 aa12.94□□□□□ -0.34
UBFD1-205ENST00000566136 hCG_1984214I3L0E3 225 aa12.94□□□□□ -0.34
UBFD1-205ENST00000566136 SCP2P22307 547 aa12.94□□□□□ -0.34
UBFD1-205ENST00000566136 NOS2P35228 1153 aa12.94□□□□□ -0.34
UBFD1-205ENST00000566136 ESCO1Q5FWF5 840 aa12.94□□□□□ -0.34
UBFD1-205ENST00000566136 VPS37DQ86XT2 251 aa12.94□□□□□ -0.34
UBFD1-205ENST00000566136 TTC8Q8TAM2 541 aa12.94□□□□□ -0.34
UBFD1-205ENST00000566136 CRELD1Q96HD1 420 aa12.94□□□□□ -0.34
UBFD1-205ENST00000566136 YTHDC2Q9H6S0 1430 aaKnown RBP12.93□□□□□ -0.34
UBFD1-205ENST00000566136 RDH13Q8NBN7 331 aa12.93□□□□□ -0.34
UBFD1-205ENST00000566136 ST7Q9NRC1 585 aa12.93□□□□□ -0.34
UBFD1-205ENST00000566136 SOS2Q07890 1332 aaPredicted RBP12.93□□□□□ -0.34
UBFD1-205ENST00000566136 TGFB3P10600 412 aa12.93□□□□□ -0.34
UBFD1-205ENST00000566136 TMX1Q9H3N1 280 aa12.93□□□□□ -0.34
UBFD1-205ENST00000566136 CDC42BPGQ6DT37 1551 aa12.92□□□□□ -0.34
UBFD1-205ENST00000566136 AFF2P51816 1311 aa12.92□□□□□ -0.34
UBFD1-205ENST00000566136 POLR3AO14802 1390 aaPredicted RBP12.92□□□□□ -0.34
UBFD1-205ENST00000566136 C6orf229H3BNL8 230 aa12.92□□□□□ -0.34
UBFD1-205ENST00000566136 RGS20O76081 388 aa12.92□□□□□ -0.34
UBFD1-205ENST00000566136 NFX1Q12986 1120 aaKnown RBP12.92□□□□□ -0.34
UBFD1-205ENST00000566136 PUS10Q3MIT2 529 aaKnown RBP12.92□□□□□ -0.34
UBFD1-205ENST00000566136 RNF135Q8IUD6 432 aa12.92□□□□□ -0.34
UBFD1-205ENST00000566136 GEMIN8Q9NWZ8 242 aaKnown RBP12.92□□□□□ -0.34
UBFD1-205ENST00000566136 KLF4O43474 513 aa12.91□□□□□ -0.34
UBFD1-205ENST00000566136 ADAMTS2O95450 1211 aa12.91□□□□□ -0.34
UBFD1-205ENST00000566136 NASPP49321 788 aaPredicted RBP12.91□□□□□ -0.34
UBFD1-205ENST00000566136 PLCB3Q01970 1234 aa12.91□□□□□ -0.34
UBFD1-205ENST00000566136 MPNDQ8N594 471 aa12.91□□□□□ -0.34
UBFD1-205ENST00000566136 CGNL1Q0VF96 1302 aa12.91□□□□□ -0.34
UBFD1-205ENST00000566136 ZBTB24O43167 697 aaPredicted RBP12.91□□□□□ -0.34
UBFD1-205ENST00000566136 HIP1RO75146 1068 aa12.91□□□□□ -0.34
UBFD1-205ENST00000566136 HDAC1Q13547 482 aaPredicted RBP12.91□□□□□ -0.34
UBFD1-205ENST00000566136 MAPRE1Q15691 268 aaKnown RBP12.91□□□□□ -0.34
UBFD1-205ENST00000566136 L1TD1Q5T7N2 865 aaKnown RBP12.91□□□□□ -0.34
UBFD1-205ENST00000566136 PI16Q6UXB8 463 aa12.91□□□□□ -0.34
UBFD1-205ENST00000566136 DRC7Q8IY82 874 aa12.91□□□□□ -0.34
UBFD1-205ENST00000566136 PPM1EQ8WY54 764 aa12.91□□□□□ -0.34
UBFD1-205ENST00000566136 RRP7AQ9Y3A4 280 aaKnown RBP12.91□□□□□ -0.34
UBFD1-205ENST00000566136 FOXO3O43524 673 aa12.9□□□□□ -0.34
UBFD1-205ENST00000566136 NBNO60934 754 aa12.9□□□□□ -0.34
UBFD1-205ENST00000566136 MTHFSP49914 203 aa12.9□□□□□ -0.34
UBFD1-205ENST00000566136 ZBED6P86452 979 aa12.9□□□□□ -0.34
UBFD1-205ENST00000566136 SF3B2Q13435 895 aaKnown RBP12.9□□□□□ -0.34
UBFD1-205ENST00000566136 RAB33AQ14088 237 aa12.9□□□□□ -0.34
UBFD1-205ENST00000566136 ZRSR2Q15696 482 aaKnown RBP12.9□□□□□ -0.34
UBFD1-205ENST00000566136 KNDC1Q76NI1 1749 aa12.9□□□□□ -0.34
UBFD1-205ENST00000566136 LMNB1P20700 586 aa12.9□□□□□ -0.34
UBFD1-205ENST00000566136 HS2ST1Q7LGA3 356 aa12.9□□□□□ -0.34
UBFD1-205ENST00000566136 DNAJC25Q9H1X3 360 aa12.9□□□□□ -0.34
UBFD1-205ENST00000566136 ISY1Q9ULR0 285 aaKnown RBP12.9□□□□□ -0.34
UBFD1-205ENST00000566136 GJA5P36382 358 aa12.89□□□□□ -0.35
UBFD1-205ENST00000566136 TRMT2AQ8IZ69 625 aaKnown RBP12.89□□□□□ -0.35
UBFD1-205ENST00000566136 PRAM1Q96QH2 718 aa12.89□□□□□ -0.35
UBFD1-205ENST00000566136 LUZP4Q9P127 313 aa12.89□□□□□ -0.35
UBFD1-205ENST00000566136 ANKRD36BQ8N2N9 1353 aa12.89□□□□□ -0.35
UBFD1-205ENST00000566136 FZD6O60353 706 aa12.89□□□□□ -0.35
UBFD1-205ENST00000566136 EPB42P16452 691 aa12.89□□□□□ -0.35
UBFD1-205ENST00000566136 RXRBP28702 533 aa12.89□□□□□ -0.35
UBFD1-205ENST00000566136 FAM26DQ5JW98 314 aa12.89□□□□□ -0.35
UBFD1-205ENST00000566136 FAM83BQ5T0W9 1011 aa12.89□□□□□ -0.35
UBFD1-205ENST00000566136 ACBD5Q5T8D3 534 aaPredicted RBP12.89□□□□□ -0.35
UBFD1-205ENST00000566136 HELQQ8TDG4 1101 aa12.89□□□□□ -0.35
UBFD1-205ENST00000566136 NOD1Q9Y239 953 aa12.89□□□□□ -0.35
UBFD1-205ENST00000566136 ALDH1L2Q3SY69 923 aa12.88□□□□□ -0.35
UBFD1-205ENST00000566136 CCDC102BQ68D86 513 aa12.88□□□□□ -0.35
UBFD1-205ENST00000566136 CCDC174Q6PII3 467 aa12.88□□□□□ -0.35
UBFD1-205ENST00000566136 SLAIN1Q8ND83 568 aa12.88□□□□□ -0.35
UBFD1-205ENST00000566136 CCDC8Q9H0W5 538 aaPredicted RBP12.88□□□□□ -0.35
UBFD1-205ENST00000566136 ALDH8A1Q9H2A2 487 aaPredicted RBP12.88□□□□□ -0.35
UBFD1-205ENST00000566136 CEP126Q9P2H0 1117 aa12.88□□□□□ -0.35
UBFD1-205ENST00000566136 NPHP3Q7Z494 1330 aa12.88□□□□□ -0.35
UBFD1-205ENST00000566136 NDUFB5O43674 189 aa12.88□□□□□ -0.35
UBFD1-205ENST00000566136 BCAR3O75815 825 aa12.88□□□□□ -0.35
UBFD1-205ENST00000566136 DDX46Q7L014 1031 aaKnown RBP12.88□□□□□ -0.35
UBFD1-205ENST00000566136 RUNDC1Q96C34 613 aa12.88□□□□□ -0.35
UBFD1-205ENST00000566136 POGKQ9P215 609 aa12.88□□□□□ -0.35
UBFD1-205ENST00000566136 AKAP10O43572 662 aa12.87□□□□□ -0.35
UBFD1-205ENST00000566136 FAM160A1Q05DH4 1040 aa12.87□□□□□ -0.35
UBFD1-205ENST00000566136 VPS72Q15906 364 aa12.87□□□□□ -0.35
UBFD1-205ENST00000566136 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.87□□□□□ -0.35
UBFD1-205ENST00000566136 USP32Q8NFA0 1604 aa12.87□□□□□ -0.35
UBFD1-205ENST00000566136 NGLY1Q96IV0 654 aa12.87□□□□□ -0.35
UBFD1-205ENST00000566136 PCDH10Q9P2E7 1040 aa12.87□□□□□ -0.35
UBFD1-205ENST00000566136 EVLQ9UI08 416 aaPredicted RBP12.87□□□□□ -0.35
UBFD1-205ENST00000566136 PXDNQ92626 1479 aa12.87□□□□□ -0.35
UBFD1-205ENST00000566136 A0A1W2PP64 1363 aa12.87□□□□□ -0.35
UBFD1-205ENST00000566136 ANAPC16Q96DE5 110 aa12.87□□□□□ -0.35
UBFD1-205ENST00000566136 IRS4O14654 1257 aaPredicted RBP12.86□□□□□ -0.35
UBFD1-205ENST00000566136 GNA15P30679 374 aa12.86□□□□□ -0.35
UBFD1-205ENST00000566136 TMEM95Q3KNT9 176 aa12.86□□□□□ -0.35
UBFD1-205ENST00000566136 ANO1Q5XXA6 986 aa12.86□□□□□ -0.35
UBFD1-205ENST00000566136 TRAF7Q6Q0C0 670 aa12.86□□□□□ -0.35
UBFD1-205ENST00000566136 TSPAN18Q96SJ8 248 aa12.86□□□□□ -0.35
UBFD1-205ENST00000566136 FMN2Q9NZ56 1722 aa12.86□□□□□ -0.35
UBFD1-205ENST00000566136 SEPT6Q14141 434 aa12.86□□□□□ -0.35
UBFD1-205ENST00000566136 GGNBP2Q9H3C7 697 aa12.86□□□□□ -0.35
UBFD1-205ENST00000566136 TCP11L2Q8N4U5 519 aa12.85□□□□□ -0.35
UBFD1-205ENST00000566136 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms