RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 MCAMP43121 646 aa15.37■□□□□ 0.05
SHCBP1-204ENST00000565887 CRKP46108 304 aa15.37■□□□□ 0.05
SHCBP1-204ENST00000565887 TTF1Q15361 905 aaPredicted RBP15.37■□□□□ 0.05
SHCBP1-204ENST00000565887 SULF1Q8IWU6 871 aa15.37■□□□□ 0.05
SHCBP1-204ENST00000565887 ZBED3Q96IU2 234 aaPredicted RBP15.37■□□□□ 0.05
SHCBP1-204ENST00000565887 ZDHHC15Q96MV8 337 aa15.37■□□□□ 0.05
SHCBP1-204ENST00000565887 ABCF2Q9UG63 623 aa15.37■□□□□ 0.05
SHCBP1-204ENST00000565887 SPDYE2BA6NHP3 402 aa15.36■□□□□ 0.05
SHCBP1-204ENST00000565887 SPDYE6P0CI01 402 aa15.36■□□□□ 0.05
SHCBP1-204ENST00000565887 ATP5JP18859 108 aa15.36■□□□□ 0.05
SHCBP1-204ENST00000565887 MAP1SQ66K74 1059 aaPredicted RBP15.36■□□□□ 0.05
SHCBP1-204ENST00000565887 APOBEC3FQ8IUX4 373 aaKnown RBP15.36■□□□□ 0.05
SHCBP1-204ENST00000565887 FAM163AQ96GL9 167 aaPredicted RBP15.36■□□□□ 0.05
SHCBP1-204ENST00000565887 LRP2BPQ9P2M1 347 aa15.36■□□□□ 0.05
SHCBP1-204ENST00000565887 MYH13Q9UKX3 1938 aa15.35■□□□□ 0.05
SHCBP1-204ENST00000565887 MAP4K4O95819 1239 aaPredicted RBP15.35■□□□□ 0.05
SHCBP1-204ENST00000565887 EGFRP00533 1210 aa15.35■□□□□ 0.05
SHCBP1-204ENST00000565887 NEFLP07196 543 aa15.35■□□□□ 0.05
SHCBP1-204ENST00000565887 NBPF9Q3BBW0 867 aa15.35■□□□□ 0.05
SHCBP1-204ENST00000565887 ANKRD45Q5TZF3 282 aa15.35■□□□□ 0.05
SHCBP1-204ENST00000565887 KRT26Q7Z3Y9 468 aa15.35■□□□□ 0.05
SHCBP1-204ENST00000565887 DZIP1Q86YF9 867 aaKnown RBP15.35■□□□□ 0.05
SHCBP1-204ENST00000565887 SMC5Q8IY18 1101 aa15.35■□□□□ 0.05
SHCBP1-204ENST00000565887 ADAMTSL1Q8N6G6 1762 aa15.34■□□□□ 0.05
SHCBP1-204ENST00000565887 ZNF646O15015 1829 aaPredicted RBP15.34■□□□□ 0.05
SHCBP1-204ENST00000565887 HSPA6P17066 643 aa15.34■□□□□ 0.05
SHCBP1-204ENST00000565887 APLP1P51693 650 aa15.34■□□□□ 0.05
SHCBP1-204ENST00000565887 TNFAIP1Q13829 316 aa15.34■□□□□ 0.05
SHCBP1-204ENST00000565887 ANGEL2Q5VTE6 544 aaKnown RBP15.34■□□□□ 0.05
SHCBP1-204ENST00000565887 PRMT6Q96LA8 375 aaPredicted RBP15.34■□□□□ 0.05
SHCBP1-204ENST00000565887 ECHDC1Q9NTX5 307 aa15.34■□□□□ 0.05
SHCBP1-204ENST00000565887 TLR7Q9NYK1 1049 aaKnown RBP15.34■□□□□ 0.05
SHCBP1-204ENST00000565887 GGA3Q9NZ52 723 aa15.34■□□□□ 0.05
SHCBP1-204ENST00000565887 PPP2R3BQ9Y5P8 575 aa15.34■□□□□ 0.05
SHCBP1-204ENST00000565887 ERC2O15083 957 aa15.33■□□□□ 0.04
SHCBP1-204ENST00000565887 SMARCA5O60264 1052 aaPredicted RBP15.33■□□□□ 0.04
SHCBP1-204ENST00000565887 PRDX5P30044 214 aa15.33■□□□□ 0.04
SHCBP1-204ENST00000565887 IRX6P78412 446 aaPredicted RBP15.33■□□□□ 0.04
SHCBP1-204ENST00000565887 MAP3K12Q12852 859 aa15.33■□□□□ 0.04
SHCBP1-204ENST00000565887 FKBP1CQ5VVH2 108 aa15.33■□□□□ 0.04
SHCBP1-204ENST00000565887 USP48Q86UV5 1035 aa15.33■□□□□ 0.04
SHCBP1-204ENST00000565887 TMOD2Q9NZR1 351 aa15.33■□□□□ 0.04
SHCBP1-204ENST00000565887 RAI14Q9P0K7 980 aa15.33■□□□□ 0.04
SHCBP1-204ENST00000565887 TTC41PQ6P2S7 1318 aa15.33■□□□□ 0.04
SHCBP1-204ENST00000565887 PASKQ96RG2 1323 aa15.33■□□□□ 0.04
SHCBP1-204ENST00000565887 IGHDP01880 384 aa15.32■□□□□ 0.04
SHCBP1-204ENST00000565887 CYP2E1P05181 493 aaPredicted RBP15.32■□□□□ 0.04
SHCBP1-204ENST00000565887 ZAP70P43403 619 aa15.32■□□□□ 0.04
SHCBP1-204ENST00000565887 TNNI2P48788 182 aa15.32■□□□□ 0.04
SHCBP1-204ENST00000565887 CERS3Q8IU89 383 aa15.32■□□□□ 0.04
SHCBP1-204ENST00000565887 BCL11AQ9H165 835 aa15.32■□□□□ 0.04
SHCBP1-204ENST00000565887 SNRKQ9NRH2 765 aa15.32■□□□□ 0.04
SHCBP1-204ENST00000565887 TMEM88BA6NKF7 163 aa15.31■□□□□ 0.04
SHCBP1-204ENST00000565887 NF2P35240 595 aa15.31■□□□□ 0.04
SHCBP1-204ENST00000565887 MECOMQ03112 1051 aa15.31■□□□□ 0.04
SHCBP1-204ENST00000565887 GRIK5Q16478 980 aa15.31■□□□□ 0.04
SHCBP1-204ENST00000565887 SPDYE2Q495Y8 402 aa15.31■□□□□ 0.04
SHCBP1-204ENST00000565887 APOBEC3HQ6NTF7 200 aaKnown RBP15.31■□□□□ 0.04
SHCBP1-204ENST00000565887 PI16Q6UXB8 463 aa15.31■□□□□ 0.04
SHCBP1-204ENST00000565887 TBC1D9Q6ZT07 1266 aa15.31■□□□□ 0.04
SHCBP1-204ENST00000565887 HAUS7Q99871 368 aa15.31■□□□□ 0.04
SHCBP1-204ENST00000565887 NOL10Q9BSC4 688 aaKnown RBP15.31■□□□□ 0.04
SHCBP1-204ENST00000565887 GLIS2Q9BZE0 524 aaPredicted RBP15.31■□□□□ 0.04
SHCBP1-204ENST00000565887 ZNF70Q9UC06 446 aaPredicted RBP15.31■□□□□ 0.04
SHCBP1-204ENST00000565887 COL1A1P02452 1464 aaPredicted RBP15.31■□□□□ 0.04
SHCBP1-204ENST00000565887 GAKO14976 1311 aa15.3■□□□□ 0.04
SHCBP1-204ENST00000565887 BAG3O95817 575 aa15.3■□□□□ 0.04
SHCBP1-204ENST00000565887 PLCG2P16885 1265 aa15.3■□□□□ 0.04
SHCBP1-204ENST00000565887 NUCB1Q02818 461 aa15.3■□□□□ 0.04
SHCBP1-204ENST00000565887 LRRFIP1Q32MZ4 808 aaKnown RBP15.3■□□□□ 0.04
SHCBP1-204ENST00000565887 ERICH6BQ5W0A0 696 aa15.3■□□□□ 0.04
SHCBP1-204ENST00000565887 NAA16Q6N069 864 aaPredicted RBP15.3■□□□□ 0.04
SHCBP1-204ENST00000565887 NSUN4Q96CB9 384 aaKnown RBP15.3■□□□□ 0.04
SHCBP1-204ENST00000565887 TDRD3Q9H7E2 651 aaKnown RBP15.3■□□□□ 0.04
SHCBP1-204ENST00000565887 CREBZFQ9NS37 354 aa15.3■□□□□ 0.04
SHCBP1-204ENST00000565887 POLR2AP24928 1970 aaKnown RBP15.29■□□□□ 0.04
SHCBP1-204ENST00000565887 GPR75-ASB3A0A0A6YYF3 556 aa15.29■□□□□ 0.04
SHCBP1-204ENST00000565887 GLRX3O76003 335 aaKnown RBP15.29■□□□□ 0.04
SHCBP1-204ENST00000565887 SUPT20HL1Q3ZLR7 823 aa15.29■□□□□ 0.04
SHCBP1-204ENST00000565887 ZSCAN25Q6NSZ9 544 aa15.29■□□□□ 0.04
SHCBP1-204ENST00000565887 FAM83AQ86UY5 434 aa15.29■□□□□ 0.04
SHCBP1-204ENST00000565887 CHD1LQ86WJ1 897 aa15.29■□□□□ 0.04
SHCBP1-204ENST00000565887 HOOK2Q96ED9 719 aa15.29■□□□□ 0.04
SHCBP1-204ENST00000565887 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.29■□□□□ 0.04
SHCBP1-204ENST00000565887 DEFB129Q9H1M3 183 aa15.29■□□□□ 0.04
SHCBP1-204ENST00000565887 BOLA2Q9H3K6 86 aa15.29■□□□□ 0.04
SHCBP1-204ENST00000565887 VEZTQ9HBM0 779 aa15.29■□□□□ 0.04
SHCBP1-204ENST00000565887 PAG1Q9NWQ8 432 aa15.29■□□□□ 0.04
SHCBP1-204ENST00000565887 DAGLAQ9Y4D2 1042 aa15.29■□□□□ 0.04
SHCBP1-204ENST00000565887 AKAP11Q9UKA4 1901 aa15.29■□□□□ 0.04
SHCBP1-204ENST00000565887 MROH7-TTC4A0A0A0MT08 1334 aa15.28■□□□□ 0.04
SHCBP1-204ENST00000565887 IDH1O75874 414 aaKnown RBP15.28■□□□□ 0.04
SHCBP1-204ENST00000565887 MX1P20591 662 aa15.28■□□□□ 0.04
SHCBP1-204ENST00000565887 FKBP1BP68106 108 aa15.28■□□□□ 0.04
SHCBP1-204ENST00000565887 DIXDC1Q155Q3 683 aa15.28■□□□□ 0.04
SHCBP1-204ENST00000565887 TICAM2Q86XR7 235 aa15.28■□□□□ 0.04
SHCBP1-204ENST00000565887 C2orf69Q8N8R5 385 aa15.28■□□□□ 0.04
SHCBP1-204ENST00000565887 DNAJC2Q99543 621 aaKnown RBP15.28■□□□□ 0.04
SHCBP1-204ENST00000565887 USP40Q9NVE5 1235 aa15.28■□□□□ 0.04
SHCBP1-204ENST00000565887 STAP2Q9UGK3 403 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms