RNA–Protein interactions for RNA: ENST00000565580.3

TCF4-229, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-229ENST00000565580 GRM1Q13255 1194 aa8.15□□□□□ -1.1
TCF4-229ENST00000565580 FKBP5Q13451 457 aaPredicted RBP8.15□□□□□ -1.1
TCF4-229ENST00000565580 GCKRQ14397 625 aa8.15□□□□□ -1.1
TCF4-229ENST00000565580 TJAP1Q5JTD0 557 aa8.15□□□□□ -1.1
TCF4-229ENST00000565580 RBM26Q5T8P6 1007 aaKnown RBP8.15□□□□□ -1.1
TCF4-229ENST00000565580 USP48Q86UV5 1035 aa8.15□□□□□ -1.1
TCF4-229ENST00000565580 WDR63Q8IWG1 891 aa8.15□□□□□ -1.1
TCF4-229ENST00000565580 DNAAF4Q8WXU2 420 aa8.15□□□□□ -1.1
TCF4-229ENST00000565580 ZNF408Q9H9D4 720 aa8.15□□□□□ -1.1
TCF4-229ENST00000565580 PNMA3Q9UL41 463 aa8.15□□□□□ -1.1
TCF4-229ENST00000565580 SPEF2Q9C093 1822 aa8.15□□□□□ -1.11
TCF4-229ENST00000565580 ASTN2O75129 1339 aaPredicted RBP8.14□□□□□ -1.11
TCF4-229ENST00000565580 MYH3P11055 1940 aa8.14□□□□□ -1.11
TCF4-229ENST00000565580 GFRA3O60609 400 aa8.14□□□□□ -1.11
TCF4-229ENST00000565580 HSPA8P11142 646 aaKnown RBP8.14□□□□□ -1.11
TCF4-229ENST00000565580 ATP2B4P23634 1241 aa8.14□□□□□ -1.11
TCF4-229ENST00000565580 CTCFP49711 727 aaPredicted RBP8.14□□□□□ -1.11
TCF4-229ENST00000565580 LBX1P52954 281 aa8.14□□□□□ -1.11
TCF4-229ENST00000565580 CDC37L1Q7L3B6 337 aa8.14□□□□□ -1.11
TCF4-229ENST00000565580 SAPCD2Q86UD0 394 aa8.14□□□□□ -1.11
TCF4-229ENST00000565580 FAM9BQ8IZU0 186 aa8.14□□□□□ -1.11
TCF4-229ENST00000565580 AIDAQ96BJ3 306 aa8.14□□□□□ -1.11
TCF4-229ENST00000565580 CDC5LQ99459 802 aaKnown RBP8.14□□□□□ -1.11
TCF4-229ENST00000565580 BSDC1Q9NW68 430 aaPredicted RBP8.14□□□□□ -1.11
TCF4-229ENST00000565580 MINPP1Q9UNW1 487 aa8.14□□□□□ -1.11
TCF4-229ENST00000565580 V9GY48 417 aaPredicted RBP8.14□□□□□ -1.11
TCF4-229ENST00000565580 GRXCR2A6NFK2 248 aa8.13□□□□□ -1.11
TCF4-229ENST00000565580 ADM5C9JUS6 153 aa8.13□□□□□ -1.11
TCF4-229ENST00000565580 F6X3S4 739 aa8.13□□□□□ -1.11
TCF4-229ENST00000565580 ITGA6P23229 1130 aa8.13□□□□□ -1.11
TCF4-229ENST00000565580 KLRK1P26718 216 aa8.13□□□□□ -1.11
TCF4-229ENST00000565580 ECE1P42892 770 aa8.13□□□□□ -1.11
TCF4-229ENST00000565580 KIF4BQ2VIQ3 1234 aa8.13□□□□□ -1.11
TCF4-229ENST00000565580 FAM161AQ3B820 660 aa8.13□□□□□ -1.11
TCF4-229ENST00000565580 RSBN1LQ6PCB5 846 aaPredicted RBP8.13□□□□□ -1.11
TCF4-229ENST00000565580 KRT26Q7Z3Y9 468 aa8.13□□□□□ -1.11
TCF4-229ENST00000565580 TXNRD3Q86VQ6 643 aa8.13□□□□□ -1.11
TCF4-229ENST00000565580 LINS1Q8NG48 757 aa8.13□□□□□ -1.11
TCF4-229ENST00000565580 GMLQ99445 158 aa8.13□□□□□ -1.11
TCF4-229ENST00000565580 PLA2G12BQ9BX93 195 aa8.13□□□□□ -1.11
TCF4-229ENST00000565580 PRDM10Q9NQV6 1147 aa8.13□□□□□ -1.11
TCF4-229ENST00000565580 POLR2AP24928 1970 aaKnown RBP8.13□□□□□ -1.11
TCF4-229ENST00000565580 PSME4Q14997 1843 aa8.13□□□□□ -1.11
TCF4-229ENST00000565580 ZNF609O15014 1411 aa8.12□□□□□ -1.11
TCF4-229ENST00000565580 MED23Q9ULK4 1368 aa8.12□□□□□ -1.11
TCF4-229ENST00000565580 SMAPO00193 183 aa8.12□□□□□ -1.11
TCF4-229ENST00000565580 CSF1RP07333 972 aa8.12□□□□□ -1.11
TCF4-229ENST00000565580 GGCXP38435 758 aa8.12□□□□□ -1.11
TCF4-229ENST00000565580 CCT4P50991 539 aaKnown RBP8.12□□□□□ -1.11
TCF4-229ENST00000565580 ZNF280AP59817 542 aaPredicted RBP8.12□□□□□ -1.11
TCF4-229ENST00000565580 MAP2K1Q02750 393 aaPredicted RBP8.12□□□□□ -1.11
TCF4-229ENST00000565580 BEND3Q5T5X7 828 aa8.12□□□□□ -1.11
TCF4-229ENST00000565580 TRAF7Q6Q0C0 670 aa8.12□□□□□ -1.11
TCF4-229ENST00000565580 AGBL3Q8NEM8 1001 aa8.12□□□□□ -1.11
TCF4-229ENST00000565580 ZIC5Q96T25 663 aa8.12□□□□□ -1.11
TCF4-229ENST00000565580 MTRQ99707 1265 aa8.12□□□□□ -1.11
TCF4-229ENST00000565580 MXD3Q9BW11 206 aa8.12□□□□□ -1.11
TCF4-229ENST00000565580 MYH16Q9H6N6 1097 aa8.12□□□□□ -1.11
TCF4-229ENST00000565580 GGA3Q9NZ52 723 aa8.12□□□□□ -1.11
TCF4-229ENST00000565580 CACNA1FO60840 1977 aa8.11□□□□□ -1.11
TCF4-229ENST00000565580 ZNF521Q96K83 1311 aa8.11□□□□□ -1.11
TCF4-229ENST00000565580 ZNF646O15015 1829 aaPredicted RBP8.11□□□□□ -1.11
TCF4-229ENST00000565580 USP17L3A6NCW0 530 aa8.11□□□□□ -1.11
TCF4-229ENST00000565580 USP17L4A6NCW7 530 aa8.11□□□□□ -1.11
TCF4-229ENST00000565580 SNAP23O00161 211 aa8.11□□□□□ -1.11
TCF4-229ENST00000565580 MAP2K2P36507 400 aa8.11□□□□□ -1.11
TCF4-229ENST00000565580 IGHMBP2P38935 993 aaKnown RBP8.11□□□□□ -1.11
TCF4-229ENST00000565580 HUNKP57058 714 aa8.11□□□□□ -1.11
TCF4-229ENST00000565580 FOXO4P98177 505 aa8.11□□□□□ -1.11
TCF4-229ENST00000565580 SCARF1Q14162 830 aa8.11□□□□□ -1.11
TCF4-229ENST00000565580 EPHA10Q5JZY3 1008 aa8.11□□□□□ -1.11
TCF4-229ENST00000565580 DACT2Q5SW24 774 aa8.11□□□□□ -1.11
TCF4-229ENST00000565580 USP17L1Q7RTZ2 530 aa8.11□□□□□ -1.11
TCF4-229ENST00000565580 PODNQ7Z5L7 613 aa8.11□□□□□ -1.11
TCF4-229ENST00000565580 DCPSQ96C86 337 aaKnown RBP8.11□□□□□ -1.11
TCF4-229ENST00000565580 HHIPL1Q96JK4 782 aa8.11□□□□□ -1.11
TCF4-229ENST00000565580 PRKD2Q9BZL6 878 aa8.11□□□□□ -1.11
TCF4-229ENST00000565580 SCAF8Q9UPN6 1271 aaKnown RBP8.11□□□□□ -1.11
TCF4-229ENST00000565580 ZNF804BA4D1E1 1349 aa8.1□□□□□ -1.11
TCF4-229ENST00000565580 NRG2O14511 850 aaPredicted RBP8.1□□□□□ -1.11
TCF4-229ENST00000565580 USP17L8P0C7I0 530 aa8.1□□□□□ -1.11
TCF4-229ENST00000565580 CHRNDQ07001 517 aa8.1□□□□□ -1.11
TCF4-229ENST00000565580 ANGEL2Q5VTE6 544 aaKnown RBP8.1□□□□□ -1.11
TCF4-229ENST00000565580 NUDT18Q6ZVK8 323 aa8.1□□□□□ -1.11
TCF4-229ENST00000565580 SLF2Q8IX21 1173 aa8.1□□□□□ -1.11
TCF4-229ENST00000565580 CDCA5Q96FF9 252 aa8.1□□□□□ -1.11
TCF4-229ENST00000565580 MPHOSPH8Q99549 860 aa8.1□□□□□ -1.11
TCF4-229ENST00000565580 GBA2Q9HCG7 927 aaPredicted RBP8.1□□□□□ -1.11
TCF4-229ENST00000565580 MYOZ2Q9NPC6 264 aa8.1□□□□□ -1.11
TCF4-229ENST00000565580 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.1□□□□□ -1.11
TCF4-229ENST00000565580 LEMD3Q9Y2U8 911 aa8.1□□□□□ -1.11
TCF4-229ENST00000565580 IRS2Q9Y4H2 1338 aa8.09□□□□□ -1.11
TCF4-229ENST00000565580 ANKRD18BA2A2Z9 1011 aa8.09□□□□□ -1.11
TCF4-229ENST00000565580 FAM155AB1AL88 458 aaPredicted RBP8.09□□□□□ -1.11
TCF4-229ENST00000565580 RNF40O75150 1001 aa8.09□□□□□ -1.11
TCF4-229ENST00000565580 TAF5LO75529 589 aa8.09□□□□□ -1.11
TCF4-229ENST00000565580 PRKCSHP14314 528 aaPredicted RBP8.09□□□□□ -1.11
TCF4-229ENST00000565580 NBPF9Q3BBW0 867 aa8.09□□□□□ -1.11
TCF4-229ENST00000565580 PPP1R18Q6NYC8 613 aa8.09□□□□□ -1.11
TCF4-229ENST00000565580 LMBR1LQ6UX01 489 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms