RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 LRRFIP2Q9Y608 721 aaKnown RBP29.73■■■□□ 2.35
RAB40C-209ENST00000565511 USP2O75604 605 aaPredicted RBP29.72■■■□□ 2.35
RAB40C-209ENST00000565511 GJA5P36382 358 aa29.72■■■□□ 2.35
RAB40C-209ENST00000565511 WNK4Q96J92 1243 aa29.72■■■□□ 2.35
RAB40C-209ENST00000565511 KIF16BQ96L93 1317 aa29.71■■■□□ 2.35
RAB40C-209ENST00000565511 TCP10L2B9ZVM9 353 aa29.71■■■□□ 2.35
RAB40C-209ENST00000565511 ZNF296Q8WUU4 475 aaPredicted RBP29.71■■■□□ 2.35
RAB40C-209ENST00000565511 API5Q9BZZ5 524 aaKnown RBP29.71■■■□□ 2.35
RAB40C-209ENST00000565511 PA2G4Q9UQ80 394 aaKnown RBP29.71■■■□□ 2.35
RAB40C-209ENST00000565511 TNNQ9UQP3 1299 aa29.71■■■□□ 2.35
RAB40C-209ENST00000565511 FRAT2O75474 233 aaPredicted RBP29.7■■■□□ 2.35
RAB40C-209ENST00000565511 CACNB3P54284 484 aa29.7■■■□□ 2.35
RAB40C-209ENST00000565511 SUPT20HL1Q3ZLR7 823 aa29.7■■■□□ 2.35
RAB40C-209ENST00000565511 SLC10A4Q96EP9 437 aa29.7■■■□□ 2.35
RAB40C-209ENST00000565511 TMEM39BQ9GZU3 492 aa29.7■■■□□ 2.35
RAB40C-209ENST00000565511 PPP1R12BO60237 982 aaPredicted RBP29.69■■■□□ 2.34
RAB40C-209ENST00000565511 IFIT1P09914 478 aaKnown RBP29.69■■■□□ 2.34
RAB40C-209ENST00000565511 TBC1D22AQ8WUA7 517 aa29.69■■■□□ 2.34
RAB40C-209ENST00000565511 SREBF2Q12772 1141 aa29.68■■■□□ 2.34
RAB40C-209ENST00000565511 CTU1Q7Z7A3 348 aaKnown RBP29.68■■■□□ 2.34
RAB40C-209ENST00000565511 SLC5A1P13866 664 aa29.67■■■□□ 2.34
RAB40C-209ENST00000565511 LPIN2Q92539 896 aa29.67■■■□□ 2.34
RAB40C-209ENST00000565511 IGF2BP3O00425 579 aaKnown RBP eCLIP29.66■■■□□ 2.34
RAB40C-209ENST00000565511 RGS19P49795 217 aa29.66■■■□□ 2.34
RAB40C-209ENST00000565511 TNFAIP1Q13829 316 aa29.66■■■□□ 2.34
RAB40C-209ENST00000565511 GPR25O00155 361 aa29.65■■■□□ 2.34
RAB40C-209ENST00000565511 CIAO1O76071 339 aa29.65■■■□□ 2.34
RAB40C-209ENST00000565511 IREB2P48200 963 aaKnown RBP29.65■■■□□ 2.34
RAB40C-209ENST00000565511 HDLBPQ00341 1268 aaKnown RBP29.65■■■□□ 2.34
RAB40C-209ENST00000565511 ZBTB48P10074 688 aaPredicted RBP29.64■■■□□ 2.34
RAB40C-209ENST00000565511 APOBEC3HQ6NTF7 200 aaKnown RBP29.64■■■□□ 2.34
RAB40C-209ENST00000565511 TEKT1Q969V4 418 aa29.64■■■□□ 2.34
RAB40C-209ENST00000565511 ZDHHC15Q96MV8 337 aa29.64■■■□□ 2.34
RAB40C-209ENST00000565511 CFHR5Q9BXR6 569 aa29.64■■■□□ 2.34
RAB40C-209ENST00000565511 ATP2B3Q16720 1220 aa29.63■■■□□ 2.33
RAB40C-209ENST00000565511 INTS3Q68E01 1043 aaKnown RBP29.63■■■□□ 2.33
RAB40C-209ENST00000565511 IFNL1Q8IU54 200 aa29.63■■■□□ 2.33
RAB40C-209ENST00000565511 CNKSR2Q8WXI2 1034 aa29.63■■■□□ 2.33
RAB40C-209ENST00000565511 ELP3Q9H9T3 547 aa29.63■■■□□ 2.33
RAB40C-209ENST00000565511 MANSC4A6NHS7 340 aaPredicted RBP29.62■■■□□ 2.33
RAB40C-209ENST00000565511 ADORA1P30542 326 aa29.62■■■□□ 2.33
RAB40C-209ENST00000565511 PPP1R3FQ6ZSY5 799 aaPredicted RBP29.62■■■□□ 2.33
RAB40C-209ENST00000565511 ANKRD13AQ8IZ07 590 aa29.62■■■□□ 2.33
RAB40C-209ENST00000565511 BCAR3O75815 825 aa29.61■■■□□ 2.33
RAB40C-209ENST00000565511 PHKA1P46020 1223 aa29.61■■■□□ 2.33
RAB40C-209ENST00000565511 ARHGAP45Q92619 1136 aa29.61■■■□□ 2.33
RAB40C-209ENST00000565511 FBXO3Q9UK99 471 aa29.61■■■□□ 2.33
RAB40C-209ENST00000565511 UNCXA6NJT0 531 aa29.6■■■□□ 2.33
RAB40C-209ENST00000565511 TRIM27P14373 513 aa29.6■■■□□ 2.33
RAB40C-209ENST00000565511 NOM1Q5C9Z4 860 aaKnown RBP29.6■■■□□ 2.33
RAB40C-209ENST00000565511 COPRSQ9NQ92 184 aa29.6■■■□□ 2.33
RAB40C-209ENST00000565511 CEP126Q9P2H0 1117 aa29.6■■■□□ 2.33
RAB40C-209ENST00000565511 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.6■■■□□ 2.33
RAB40C-209ENST00000565511 PRDX5P30044 214 aa29.59■■■□□ 2.33
RAB40C-209ENST00000565511 DIXDC1Q155Q3 683 aa29.59■■■□□ 2.33
RAB40C-209ENST00000565511 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29.59■■■□□ 2.33
RAB40C-209ENST00000565511 PTPN18Q99952 460 aa29.59■■■□□ 2.33
RAB40C-209ENST00000565511 MRIQ9BWK5 157 aa29.59■■■□□ 2.33
RAB40C-209ENST00000565511 SUGT1Q9Y2Z0 365 aa29.59■■■□□ 2.33
RAB40C-209ENST00000565511 IL15P40933 162 aaPredicted RBP29.58■■■□□ 2.33
RAB40C-209ENST00000565511 SOX10P56693 466 aa29.58■■■□□ 2.33
RAB40C-209ENST00000565511 VGLL4Q14135 290 aa29.58■■■□□ 2.33
RAB40C-209ENST00000565511 HHIPL2Q6UWX4 724 aa29.58■■■□□ 2.33
RAB40C-209ENST00000565511 OPTNQ96CV9 577 aa29.58■■■□□ 2.33
RAB40C-209ENST00000565511 HPS5Q9UPZ3 1129 aa29.58■■■□□ 2.33
RAB40C-209ENST00000565511 DAGLAQ9Y4D2 1042 aa29.58■■■□□ 2.33
RAB40C-209ENST00000565511 MAST3O60307 1309 aa29.57■■■□□ 2.32
RAB40C-209ENST00000565511 TNNI2P48788 182 aa29.57■■■□□ 2.32
RAB40C-209ENST00000565511 WDR66Q8TBY9 1149 aa29.57■■■□□ 2.32
RAB40C-209ENST00000565511 FKTNO75072 461 aa29.56■■■□□ 2.32
RAB40C-209ENST00000565511 MLLT1Q03111 559 aaPredicted RBP29.56■■■□□ 2.32
RAB40C-209ENST00000565511 MIER1Q8N108 512 aa29.56■■■□□ 2.32
RAB40C-209ENST00000565511 MS4A4AQ96JQ5 239 aa29.55■■■□□ 2.32
RAB40C-209ENST00000565511 MYH2Q9UKX2 1941 aa29.55■■■□□ 2.32
RAB40C-209ENST00000565511 TESPA1A2RU30 521 aaPredicted RBP29.54■■■□□ 2.32
RAB40C-209ENST00000565511 ALDH1A1P00352 501 aa29.54■■■□□ 2.32
RAB40C-209ENST00000565511 INHBEP58166 350 aa29.54■■■□□ 2.32
RAB40C-209ENST00000565511 MAP3K9P80192 1104 aa29.54■■■□□ 2.32
RAB40C-209ENST00000565511 MTX1Q13505 466 aa29.54■■■□□ 2.32
RAB40C-209ENST00000565511 TNRC18O15417 2968 aaPredicted RBP29.54■■■□□ 2.32
RAB40C-209ENST00000565511 RPAP1Q9BWH6 1393 aaPredicted RBP29.53■■■□□ 2.32
RAB40C-209ENST00000565511 SRGAP3O43295 1099 aa29.53■■■□□ 2.32
RAB40C-209ENST00000565511 CRHR2Q13324 411 aa29.53■■■□□ 2.32
RAB40C-209ENST00000565511 FKBP1CQ5VVH2 108 aa29.53■■■□□ 2.32
RAB40C-209ENST00000565511 ATF7IPQ6VMQ6 1270 aa29.53■■■□□ 2.32
RAB40C-209ENST00000565511 FAM83AQ86UY5 434 aa29.53■■■□□ 2.32
RAB40C-209ENST00000565511 FRAT1Q92837 279 aaPredicted RBP29.53■■■□□ 2.32
RAB40C-209ENST00000565511 CLUAP1Q96AJ1 413 aa29.53■■■□□ 2.32
RAB40C-209ENST00000565511 SNCAIPQ9Y6H5 919 aa29.53■■■□□ 2.32
RAB40C-209ENST00000565511 GNAI3P08754 354 aa29.52■■■□□ 2.32
RAB40C-209ENST00000565511 TIMM10P62072 90 aa29.52■■■□□ 2.32
RAB40C-209ENST00000565511 CAP1Q01518 475 aa29.52■■■□□ 2.32
RAB40C-209ENST00000565511 TFCP2Q12800 502 aa29.52■■■□□ 2.32
RAB40C-209ENST00000565511 NFIAQ12857 509 aa29.52■■■□□ 2.32
RAB40C-209ENST00000565511 CCDC102BQ68D86 513 aa29.52■■■□□ 2.32
RAB40C-209ENST00000565511 CDC42EP5Q6NZY7 148 aa29.52■■■□□ 2.32
RAB40C-209ENST00000565511 BRI3BPQ8WY22 251 aa29.52■■■□□ 2.32
RAB40C-209ENST00000565511 TMOD2Q9NZR1 351 aa29.52■■■□□ 2.32
RAB40C-209ENST00000565511 SALL1Q9NSC2 1324 aa29.51■■■□□ 2.32
RAB40C-209ENST00000565511 AK9Q5TCS8 1911 aa29.51■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 211.1 ms