RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 SATB1Q01826 763 aa6.28□□□□□ -1.4
CAPN3-214ENST00000565274 C4orf46Q504U0 113 aa6.28□□□□□ -1.4
CAPN3-214ENST00000565274 C11orf96Q7Z7L8 435 aa6.28□□□□□ -1.4
CAPN3-214ENST00000565274 SKAP1Q86WV1 359 aa6.28□□□□□ -1.4
CAPN3-214ENST00000565274 RNF135Q8IUD6 432 aa6.28□□□□□ -1.4
CAPN3-214ENST00000565274 UBXN4Q92575 508 aa6.28□□□□□ -1.4
CAPN3-214ENST00000565274 MRRFQ96E11 262 aaKnown RBP6.28□□□□□ -1.4
CAPN3-214ENST00000565274 ZCCHC2Q9C0B9 1178 aaKnown RBP6.28□□□□□ -1.4
CAPN3-214ENST00000565274 NDFIP2Q9NV92 336 aa6.28□□□□□ -1.4
CAPN3-214ENST00000565274 TBC1D2BQ9UPU7 963 aa6.28□□□□□ -1.4
CAPN3-214ENST00000565274 PPLO60437 1756 aa6.28□□□□□ -1.4
CAPN3-214ENST00000565274 IL16Q14005 1332 aa6.27□□□□□ -1.41
CAPN3-214ENST00000565274 EVC2Q86UK5 1308 aa6.27□□□□□ -1.41
CAPN3-214ENST00000565274 UGGT1Q9NYU2 1555 aa6.27□□□□□ -1.41
CAPN3-214ENST00000565274 ZC3H13Q5T200 1668 aaKnown RBP6.27□□□□□ -1.41
CAPN3-214ENST00000565274 NSD3Q9BZ95 1437 aa6.27□□□□□ -1.41
CAPN3-214ENST00000565274 DCDC2BA2VCK2 349 aa6.27□□□□□ -1.41
CAPN3-214ENST00000565274 GNB5O14775 395 aa6.27□□□□□ -1.41
CAPN3-214ENST00000565274 STK10O94804 968 aaKnown RBP6.27□□□□□ -1.41
CAPN3-214ENST00000565274 FAM200BP0CF97 657 aa6.27□□□□□ -1.41
CAPN3-214ENST00000565274 EPXP11678 715 aa6.27□□□□□ -1.41
CAPN3-214ENST00000565274 TDO2P48775 406 aa6.27□□□□□ -1.41
CAPN3-214ENST00000565274 RARSP54136 660 aaKnown RBP6.27□□□□□ -1.41
CAPN3-214ENST00000565274 PSME1Q06323 249 aa6.27□□□□□ -1.41
CAPN3-214ENST00000565274 ARSJQ5FYB0 599 aaPredicted RBP6.27□□□□□ -1.41
CAPN3-214ENST00000565274 ALYREFQ86V81 257 aaKnown RBP6.27□□□□□ -1.41
CAPN3-214ENST00000565274 MORC1Q86VD1 984 aa6.27□□□□□ -1.41
CAPN3-214ENST00000565274 Q8N3U1 123 aa6.27□□□□□ -1.41
CAPN3-214ENST00000565274 ZCRB1Q8TBF4 217 aaKnown RBP6.27□□□□□ -1.41
CAPN3-214ENST00000565274 CFAP53Q96M91 514 aa6.27□□□□□ -1.41
CAPN3-214ENST00000565274 PDCL3Q9H2J4 239 aa6.27□□□□□ -1.41
CAPN3-214ENST00000565274 TPX2Q9ULW0 747 aaKnown RBP6.27□□□□□ -1.41
CAPN3-214ENST00000565274 SYNPO2Q9UMS6 1093 aa6.27□□□□□ -1.41
CAPN3-214ENST00000565274 PCDHGC4Q9Y5F7 938 aa6.27□□□□□ -1.41
CAPN3-214ENST00000565274 NEXMIFQ5QGS0 1516 aa6.26□□□□□ -1.41
CAPN3-214ENST00000565274 ATXN7O15265 892 aaPredicted RBP6.26□□□□□ -1.41
CAPN3-214ENST00000565274 FRAT2O75474 233 aaPredicted RBP6.26□□□□□ -1.41
CAPN3-214ENST00000565274 CD33P20138 364 aa6.26□□□□□ -1.41
CAPN3-214ENST00000565274 NEXNQ0ZGT2 675 aa6.26□□□□□ -1.41
CAPN3-214ENST00000565274 ZRSR2Q15696 482 aaKnown RBP6.26□□□□□ -1.41
CAPN3-214ENST00000565274 L1TD1Q5T7N2 865 aaKnown RBP6.26□□□□□ -1.41
CAPN3-214ENST00000565274 FIGNL1Q6PIW4 674 aa6.26□□□□□ -1.41
CAPN3-214ENST00000565274 SND1Q7KZF4 910 aaKnown RBP eCLIP6.26□□□□□ -1.41
CAPN3-214ENST00000565274 CD163Q86VB7 1156 aa6.26□□□□□ -1.41
CAPN3-214ENST00000565274 FNBP4Q8N3X1 1017 aaPredicted RBP6.26□□□□□ -1.41
CAPN3-214ENST00000565274 PMFBP1Q8TBY8 1022 aa6.26□□□□□ -1.41
CAPN3-214ENST00000565274 SENP7Q9BQF6 1050 aa6.26□□□□□ -1.41
CAPN3-214ENST00000565274 CRISPLD1Q9H336 500 aa6.26□□□□□ -1.41
CAPN3-214ENST00000565274 SERTAD1Q9UHV2 236 aa6.26□□□□□ -1.41
CAPN3-214ENST00000565274 FAN1Q9Y2M0 1017 aa6.26□□□□□ -1.41
CAPN3-214ENST00000565274 PNPLA6Q8IY17 1366 aa6.26□□□□□ -1.41
CAPN3-214ENST00000565274 ABCC11Q96J66 1382 aa6.26□□□□□ -1.41
CAPN3-214ENST00000565274 MROH2AA6NES4 1674 aa6.26□□□□□ -1.41
CAPN3-214ENST00000565274 SHPRHQ149N8 1683 aa6.26□□□□□ -1.41
CAPN3-214ENST00000565274 USP19O94966 1318 aa6.25□□□□□ -1.41
CAPN3-214ENST00000565274 PIK3R2O00459 728 aa6.25□□□□□ -1.41
CAPN3-214ENST00000565274 KHNYNO15037 678 aaKnown RBP6.25□□□□□ -1.41
CAPN3-214ENST00000565274 BCAR3O75815 825 aa6.25□□□□□ -1.41
CAPN3-214ENST00000565274 ARAFP10398 606 aa6.25□□□□□ -1.41
CAPN3-214ENST00000565274 CHRNA4P43681 627 aa6.25□□□□□ -1.41
CAPN3-214ENST00000565274 GDF10P55107 478 aa6.25□□□□□ -1.41
CAPN3-214ENST00000565274 DOC2BQ14184 412 aa6.25□□□□□ -1.41
CAPN3-214ENST00000565274 BECN1Q14457 450 aa6.25□□□□□ -1.41
CAPN3-214ENST00000565274 TXNDC2Q86VQ3 553 aa6.25□□□□□ -1.41
CAPN3-214ENST00000565274 PHTF2Q8N3S3 785 aa6.25□□□□□ -1.41
CAPN3-214ENST00000565274 LARGE2Q8N3Y3 721 aa6.25□□□□□ -1.41
CAPN3-214ENST00000565274 TCP11L2Q8N4U5 519 aa6.25□□□□□ -1.41
CAPN3-214ENST00000565274 SLC12A5Q9H2X9 1139 aa6.25□□□□□ -1.41
CAPN3-214ENST00000565274 FBXO9Q9UK97 447 aaPredicted RBP6.25□□□□□ -1.41
CAPN3-214ENST00000565274 ADGRB2O60241 1585 aa6.25□□□□□ -1.41
CAPN3-214ENST00000565274 ATAD2Q6PL18 1390 aa6.24□□□□□ -1.41
CAPN3-214ENST00000565274 A0A1W2PNR3 127 aa6.24□□□□□ -1.41
CAPN3-214ENST00000565274 WDHD1O75717 1129 aaPredicted RBP6.24□□□□□ -1.41
CAPN3-214ENST00000565274 IGHDP01880 384 aa6.24□□□□□ -1.41
CAPN3-214ENST00000565274 ATP4AP20648 1035 aa6.24□□□□□ -1.41
CAPN3-214ENST00000565274 DGKGP49619 791 aa6.24□□□□□ -1.41
CAPN3-214ENST00000565274 MTHFSP49914 203 aa6.24□□□□□ -1.41
CAPN3-214ENST00000565274 SCNN1DP51172 638 aa6.24□□□□□ -1.41
CAPN3-214ENST00000565274 VAC14Q08AM6 782 aa6.24□□□□□ -1.41
CAPN3-214ENST00000565274 CHSY3Q70JA7 882 aa6.24□□□□□ -1.41
CAPN3-214ENST00000565274 CCDC146Q8IYE0 955 aa6.24□□□□□ -1.41
CAPN3-214ENST00000565274 NIFKQ9BYG3 293 aaKnown RBP6.24□□□□□ -1.41
CAPN3-214ENST00000565274 PNNQ9H307 717 aaKnown RBP6.24□□□□□ -1.41
CAPN3-214ENST00000565274 DNAAF2Q9NVR5 837 aaKnown RBP6.24□□□□□ -1.41
CAPN3-214ENST00000565274 NOP53Q9NZM5 478 aaKnown RBP6.24□□□□□ -1.41
CAPN3-214ENST00000565274 GABBR1Q9UBS5 961 aa6.24□□□□□ -1.41
CAPN3-214ENST00000565274 PPP1R1BQ9UD71 204 aaPredicted RBP6.24□□□□□ -1.41
CAPN3-214ENST00000565274 SMC3Q9UQE7 1217 aa6.24□□□□□ -1.41
CAPN3-214ENST00000565274 TULP4Q9NRJ4 1543 aa6.24□□□□□ -1.41
CAPN3-214ENST00000565274 SYNRGQ9UMZ2 1314 aa6.24□□□□□ -1.41
CAPN3-214ENST00000565274 GLI2P10070 1586 aa6.23□□□□□ -1.41
CAPN3-214ENST00000565274 SOCS7O14512 581 aa6.23□□□□□ -1.41
CAPN3-214ENST00000565274 IPO8O15397 1037 aaKnown RBP6.23□□□□□ -1.41
CAPN3-214ENST00000565274 INHAP05111 366 aa6.23□□□□□ -1.41
CAPN3-214ENST00000565274 MAPTP10636 758 aaKnown RBP6.23□□□□□ -1.41
CAPN3-214ENST00000565274 PCBP4P57723 403 aaKnown RBP6.23□□□□□ -1.41
CAPN3-214ENST00000565274 SF3B2Q13435 895 aaKnown RBP6.23□□□□□ -1.41
CAPN3-214ENST00000565274 ITFG2Q969R8 447 aa6.23□□□□□ -1.41
CAPN3-214ENST00000565274 PLEKHF1Q96S99 279 aa6.23□□□□□ -1.41
CAPN3-214ENST00000565274 SEMA6BQ9H3T3 888 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms