RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 MAP3K11Q16584 847 aa18.38■□□□□ 0.53
USB1-210ENST00000565151 CAVIN4Q5BKX8 364 aa18.38■□□□□ 0.53
USB1-210ENST00000565151 VPS37DQ86XT2 251 aa18.38■□□□□ 0.53
USB1-210ENST00000565151 LPIN2Q92539 896 aa18.38■□□□□ 0.53
USB1-210ENST00000565151 ABHD8Q96I13 439 aa18.38■□□□□ 0.53
USB1-210ENST00000565151 USP2O75604 605 aaPredicted RBP18.37■□□□□ 0.53
USB1-210ENST00000565151 ADORA1P30542 326 aa18.37■□□□□ 0.53
USB1-210ENST00000565151 ATF7IPQ6VMQ6 1270 aa18.37■□□□□ 0.53
USB1-210ENST00000565151 CLUAP1Q96AJ1 413 aa18.37■□□□□ 0.53
USB1-210ENST00000565151 SAGE1Q9NXZ1 904 aa18.37■□□□□ 0.53
USB1-210ENST00000565151 MYO5AQ9Y4I1 1855 aaKnown RBP18.37■□□□□ 0.53
USB1-210ENST00000565151 IFIT1P09914 478 aaKnown RBP18.36■□□□□ 0.53
USB1-210ENST00000565151 CACNB3P54284 484 aa18.36■□□□□ 0.53
USB1-210ENST00000565151 AK9Q5TCS8 1911 aa18.36■□□□□ 0.53
USB1-210ENST00000565151 FRAT1Q92837 279 aaPredicted RBP18.36■□□□□ 0.53
USB1-210ENST00000565151 PPP2R3BQ9Y5P8 575 aa18.36■□□□□ 0.53
USB1-210ENST00000565151 SLC5A1P13866 664 aa18.35■□□□□ 0.53
USB1-210ENST00000565151 NF2P35240 595 aa18.35■□□□□ 0.53
USB1-210ENST00000565151 GJA5P36382 358 aa18.35■□□□□ 0.53
USB1-210ENST00000565151 PHKA1P46020 1223 aa18.35■□□□□ 0.53
USB1-210ENST00000565151 TM4SF4P48230 202 aa18.35■□□□□ 0.53
USB1-210ENST00000565151 MTX1Q13505 466 aa18.35■□□□□ 0.53
USB1-210ENST00000565151 ATP2B3Q16720 1220 aa18.35■□□□□ 0.53
USB1-210ENST00000565151 APOBEC3HQ6NTF7 200 aaKnown RBP18.35■□□□□ 0.53
USB1-210ENST00000565151 ARMC9Q7Z3E5 817 aa18.35■□□□□ 0.53
USB1-210ENST00000565151 TMEM57Q8N5G2 664 aa18.35■□□□□ 0.53
USB1-210ENST00000565151 TMEM39BQ9GZU3 492 aa18.35■□□□□ 0.53
USB1-210ENST00000565151 R3HDMLQ9H3Y0 253 aa18.35■□□□□ 0.53
USB1-210ENST00000565151 FBXO3Q9UK99 471 aa18.35■□□□□ 0.53
USB1-210ENST00000565151 PNMA6EA0A0J9YXQ4 647 aa18.34■□□□□ 0.53
USB1-210ENST00000565151 TCP10L2B9ZVM9 353 aa18.34■□□□□ 0.53
USB1-210ENST00000565151 MYO1BO43795 1136 aa18.34■□□□□ 0.53
USB1-210ENST00000565151 IL15P40933 162 aaPredicted RBP18.34■□□□□ 0.53
USB1-210ENST00000565151 HDLBPQ00341 1268 aaKnown RBP18.34■□□□□ 0.53
USB1-210ENST00000565151 SPRYD7Q5W111 196 aa18.34■□□□□ 0.53
USB1-210ENST00000565151 TBC1D22AQ8WUA7 517 aa18.34■□□□□ 0.53
USB1-210ENST00000565151 ZDHHC15Q96MV8 337 aa18.34■□□□□ 0.53
USB1-210ENST00000565151 MCOLN1Q9GZU1 580 aa18.34■□□□□ 0.53
USB1-210ENST00000565151 CEP126Q9P2H0 1117 aa18.34■□□□□ 0.53
USB1-210ENST00000565151 SRGAP3O43295 1099 aa18.33■□□□□ 0.52
USB1-210ENST00000565151 FRAT2O75474 233 aaPredicted RBP18.33■□□□□ 0.52
USB1-210ENST00000565151 RLBP1P12271 317 aa18.33■□□□□ 0.52
USB1-210ENST00000565151 TIMM10P62072 90 aa18.33■□□□□ 0.52
USB1-210ENST00000565151 CENPFP49454 3210 aa18.33■□□□□ 0.52
USB1-210ENST00000565151 HTTP42858 3142 aa18.33■□□□□ 0.52
USB1-210ENST00000565151 TBC1D8O95759 1140 aa18.32■□□□□ 0.52
USB1-210ENST00000565151 GNAI3P08754 354 aa18.32■□□□□ 0.52
USB1-210ENST00000565151 TEKT1Q969V4 418 aa18.32■□□□□ 0.52
USB1-210ENST00000565151 WNK4Q96J92 1243 aa18.32■□□□□ 0.52
USB1-210ENST00000565151 MRIQ9BWK5 157 aa18.32■□□□□ 0.52
USB1-210ENST00000565151 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.32■□□□□ 0.52
USB1-210ENST00000565151 IPO8O15397 1037 aaKnown RBP18.31■□□□□ 0.52
USB1-210ENST00000565151 PRDX5P30044 214 aa18.31■□□□□ 0.52
USB1-210ENST00000565151 TFCP2Q12800 502 aa18.31■□□□□ 0.52
USB1-210ENST00000565151 DIXDC1Q155Q3 683 aa18.31■□□□□ 0.52
USB1-210ENST00000565151 SUPT20HL1Q3ZLR7 823 aa18.31■□□□□ 0.52
USB1-210ENST00000565151 REM2Q8IYK8 340 aaPredicted RBP18.31■□□□□ 0.52
USB1-210ENST00000565151 DGKZQ13574 1117 aa18.3■□□□□ 0.52
USB1-210ENST00000565151 CCDC102BQ68D86 513 aa18.3■□□□□ 0.52
USB1-210ENST00000565151 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.3■□□□□ 0.52
USB1-210ENST00000565151 CNKSR2Q8WXI2 1034 aa18.3■□□□□ 0.52
USB1-210ENST00000565151 SUGT1Q9Y2Z0 365 aa18.3■□□□□ 0.52
USB1-210ENST00000565151 ZBTB22O15209 634 aa18.29■□□□□ 0.52
USB1-210ENST00000565151 PPP1R12BO60237 982 aaPredicted RBP18.29■□□□□ 0.52
USB1-210ENST00000565151 ZKSCAN2Q63HK3 967 aa18.29■□□□□ 0.52
USB1-210ENST00000565151 HHIPL2Q6UWX4 724 aa18.29■□□□□ 0.52
USB1-210ENST00000565151 WDR66Q8TBY9 1149 aa18.29■□□□□ 0.52
USB1-210ENST00000565151 SLC10A4Q96EP9 437 aa18.29■□□□□ 0.52
USB1-210ENST00000565151 DAGLAQ9Y4D2 1042 aa18.29■□□□□ 0.52
USB1-210ENST00000565151 TNRC18O15417 2968 aaPredicted RBP18.29■□□□□ 0.52
USB1-210ENST00000565151 DOCK2Q92608 1830 aa18.28■□□□□ 0.52
USB1-210ENST00000565151 ZBED9Q6R2W3 1325 aa18.28■□□□□ 0.52
USB1-210ENST00000565151 A0A1B0GUL7 405 aa18.28■□□□□ 0.52
USB1-210ENST00000565151 IGF2BP3O00425 579 aaKnown RBP eCLIP18.28■□□□□ 0.52
USB1-210ENST00000565151 GNAI2P04899 355 aa18.28■□□□□ 0.52
USB1-210ENST00000565151 RASGRF1Q13972 1273 aa18.28■□□□□ 0.52
USB1-210ENST00000565151 XAGE2Q96GT9 111 aa18.28■□□□□ 0.52
USB1-210ENST00000565151 HDAC5Q9UQL6 1122 aa18.28■□□□□ 0.52
USB1-210ENST00000565151 CDK5RAP2Q96SN8 1893 aa18.28■□□□□ 0.52
USB1-210ENST00000565151 SALL1Q9NSC2 1324 aa18.27■□□□□ 0.52
USB1-210ENST00000565151 TNFAIP1Q13829 316 aa18.27■□□□□ 0.52
USB1-210ENST00000565151 CDC42EP5Q6NZY7 148 aa18.27■□□□□ 0.52
USB1-210ENST00000565151 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.27■□□□□ 0.52
USB1-210ENST00000565151 ZNF384Q8TF68 577 aa18.27■□□□□ 0.52
USB1-210ENST00000565151 PTPN18Q99952 460 aa18.27■□□□□ 0.52
USB1-210ENST00000565151 C1orf115Q9H7X2 142 aa18.27■□□□□ 0.52
USB1-210ENST00000565151 CCDC85CA6NKD9 419 aa18.26■□□□□ 0.51
USB1-210ENST00000565151 NFIAQ12857 509 aa18.26■□□□□ 0.51
USB1-210ENST00000565151 POLA2Q14181 598 aa18.26■□□□□ 0.51
USB1-210ENST00000565151 ZFPM1Q8IX07 1006 aa18.26■□□□□ 0.51
USB1-210ENST00000565151 ZNF296Q8WUU4 475 aaPredicted RBP18.26■□□□□ 0.51
USB1-210ENST00000565151 ELP3Q9H9T3 547 aa18.26■□□□□ 0.51
USB1-210ENST00000565151 ZSWIM8A7E2V4 1837 aa18.26■□□□□ 0.51
USB1-210ENST00000565151 UNCXA6NJT0 531 aa18.25■□□□□ 0.51
USB1-210ENST00000565151 ZBTB7BO15156 539 aaPredicted RBP18.25■□□□□ 0.51
USB1-210ENST00000565151 ZBTB48P10074 688 aaPredicted RBP18.25■□□□□ 0.51
USB1-210ENST00000565151 IREB2P48200 963 aaKnown RBP18.25■□□□□ 0.51
USB1-210ENST00000565151 VGLL4Q14135 290 aa18.25■□□□□ 0.51
USB1-210ENST00000565151 FKBP1CQ5VVH2 108 aa18.25■□□□□ 0.51
USB1-210ENST00000565151 PI16Q6UXB8 463 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms