RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 SLC4A1APQ9BWU0 796 aaKnown RBP7.15□□□□□ -1.26
PTPN9-204ENST00000564970 VCPKMTQ9H867 229 aa7.15□□□□□ -1.26
PTPN9-204ENST00000564970 PAPOLBQ9NRJ5 636 aaKnown RBP7.15□□□□□ -1.26
PTPN9-204ENST00000564970 ZNF148Q9UQR1 794 aa7.15□□□□□ -1.26
PTPN9-204ENST00000564970 TMED5Q9Y3A6 229 aa7.15□□□□□ -1.26
PTPN9-204ENST00000564970 PCDHGC5Q9Y5F6 944 aa7.15□□□□□ -1.26
PTPN9-204ENST00000564970 MAP3K4Q9Y6R4 1608 aa7.15□□□□□ -1.27
PTPN9-204ENST00000564970 PBRM1Q86U86 1689 aa7.15□□□□□ -1.27
PTPN9-204ENST00000564970 SPDYE3A6NKU9 549 aa7.14□□□□□ -1.27
PTPN9-204ENST00000564970 GOLGA8AA7E2F4 631 aa7.14□□□□□ -1.27
PTPN9-204ENST00000564970 MYO1BO43795 1136 aa7.14□□□□□ -1.27
PTPN9-204ENST00000564970 TBC1D12O60347 775 aa7.14□□□□□ -1.27
PTPN9-204ENST00000564970 SASH3O75995 380 aa7.14□□□□□ -1.27
PTPN9-204ENST00000564970 CCDC166P0CW27 439 aa7.14□□□□□ -1.27
PTPN9-204ENST00000564970 PYGBP11216 843 aa7.14□□□□□ -1.27
PTPN9-204ENST00000564970 STIP1P31948 543 aaKnown RBP7.14□□□□□ -1.27
PTPN9-204ENST00000564970 MKRN4PQ13434 485 aaPredicted RBP7.14□□□□□ -1.27
PTPN9-204ENST00000564970 CMPK2Q5EBM0 449 aa7.14□□□□□ -1.27
PTPN9-204ENST00000564970 SFMBT2Q5VUG0 894 aa7.14□□□□□ -1.27
PTPN9-204ENST00000564970 MIS18BP1Q6P0N0 1132 aa7.14□□□□□ -1.27
PTPN9-204ENST00000564970 NOL8Q76FK4 1167 aaKnown RBP7.14□□□□□ -1.27
PTPN9-204ENST00000564970 ARMC9Q7Z3E5 817 aa7.14□□□□□ -1.27
PTPN9-204ENST00000564970 CHD1LQ86WJ1 897 aa7.14□□□□□ -1.27
PTPN9-204ENST00000564970 RPAP2Q8IXW5 612 aaPredicted RBP7.14□□□□□ -1.27
PTPN9-204ENST00000564970 FNBP4Q8N3X1 1017 aaPredicted RBP7.14□□□□□ -1.27
PTPN9-204ENST00000564970 PDILTQ8N807 584 aa7.14□□□□□ -1.27
PTPN9-204ENST00000564970 ZBTB10Q96DT7 871 aa7.14□□□□□ -1.27
PTPN9-204ENST00000564970 IWS1Q96ST2 819 aa7.14□□□□□ -1.27
PTPN9-204ENST00000564970 TSC22D3Q99576 134 aa7.14□□□□□ -1.27
PTPN9-204ENST00000564970 EPAS1Q99814 870 aa7.14□□□□□ -1.27
PTPN9-204ENST00000564970 DKK3Q9UBP4 350 aa7.14□□□□□ -1.27
PTPN9-204ENST00000564970 PAIP2BQ9ULR5 123 aaKnown RBP7.14□□□□□ -1.27
PTPN9-204ENST00000564970 TPX2Q9ULW0 747 aaKnown RBP7.14□□□□□ -1.27
PTPN9-204ENST00000564970 CAPN7Q9Y6W3 813 aa7.14□□□□□ -1.27
PTPN9-204ENST00000564970 SUPT6HQ7KZ85 1726 aaKnown RBP7.13□□□□□ -1.27
PTPN9-204ENST00000564970 SSH2Q76I76 1423 aa7.13□□□□□ -1.27
PTPN9-204ENST00000564970 NPHP3Q7Z494 1330 aa7.13□□□□□ -1.27
PTPN9-204ENST00000564970 TTC21BQ7Z4L5 1316 aa7.13□□□□□ -1.27
PTPN9-204ENST00000564970 SH3TC1Q8TE82 1336 aa7.13□□□□□ -1.27
PTPN9-204ENST00000564970 GOLGA6L10A0A0M3HER8 536 aa7.13□□□□□ -1.27
PTPN9-204ENST00000564970 CCDC162PA2VCL2 907 aa7.13□□□□□ -1.27
PTPN9-204ENST00000564970 GOLGA6L4A6NEF3 574 aa7.13□□□□□ -1.27
PTPN9-204ENST00000564970 B4DLN1 442 aa7.13□□□□□ -1.27
PTPN9-204ENST00000564970 BIRC5O15392 142 aa7.13□□□□□ -1.27
PTPN9-204ENST00000564970 MGRN1O60291 552 aa7.13□□□□□ -1.27
PTPN9-204ENST00000564970 ZBED4O75132 1171 aa7.13□□□□□ -1.27
PTPN9-204ENST00000564970 SMNDC1O75940 238 aaKnown RBP eCLIP7.13□□□□□ -1.27
PTPN9-204ENST00000564970 TMCC1O94876 653 aa7.13□□□□□ -1.27
PTPN9-204ENST00000564970 CD2BP2O95400 341 aaKnown RBP7.13□□□□□ -1.27
PTPN9-204ENST00000564970 NPTXRO95502 500 aa7.13□□□□□ -1.27
PTPN9-204ENST00000564970 TROVE2P10155 538 aaKnown RBP eCLIP7.13□□□□□ -1.27
PTPN9-204ENST00000564970 RANBP1P43487 201 aa7.13□□□□□ -1.27
PTPN9-204ENST00000564970 PSMC4P43686 418 aa7.13□□□□□ -1.27
PTPN9-204ENST00000564970 NEK2P51955 445 aa7.13□□□□□ -1.27
PTPN9-204ENST00000564970 RARSP54136 660 aaKnown RBP7.13□□□□□ -1.27
PTPN9-204ENST00000564970 MCCD1P59942 119 aaPredicted RBP7.13□□□□□ -1.27
PTPN9-204ENST00000564970 ACTN3Q08043 901 aaPredicted RBP7.13□□□□□ -1.27
PTPN9-204ENST00000564970 CUL4BQ13620 913 aa7.13□□□□□ -1.27
PTPN9-204ENST00000564970 FBXW10Q5XX13 1052 aa7.13□□□□□ -1.27
PTPN9-204ENST00000564970 CWC27Q6UX04 472 aaKnown RBP7.13□□□□□ -1.27
PTPN9-204ENST00000564970 SYNE3Q6ZMZ3 975 aa7.13□□□□□ -1.27
PTPN9-204ENST00000564970 TBC1D9Q6ZT07 1266 aa7.13□□□□□ -1.27
PTPN9-204ENST00000564970 APBB1IPQ7Z5R6 666 aaPredicted RBP7.13□□□□□ -1.27
PTPN9-204ENST00000564970 USP48Q86UV5 1035 aa7.13□□□□□ -1.27
PTPN9-204ENST00000564970 PARP9Q8IXQ6 854 aa7.13□□□□□ -1.27
PTPN9-204ENST00000564970 ATP11CQ8NB49 1132 aa7.13□□□□□ -1.27
PTPN9-204ENST00000564970 CFAP61Q8NHU2 1237 aa7.13□□□□□ -1.27
PTPN9-204ENST00000564970 WDR66Q8TBY9 1149 aa7.13□□□□□ -1.27
PTPN9-204ENST00000564970 RSPH1Q8WYR4 309 aa7.13□□□□□ -1.27
PTPN9-204ENST00000564970 SMARCC1Q92922 1105 aaPredicted RBP7.13□□□□□ -1.27
PTPN9-204ENST00000564970 DHTKD1Q96HY7 919 aaPredicted RBP7.13□□□□□ -1.27
PTPN9-204ENST00000564970 CCDC28BQ9BUN5 200 aa7.13□□□□□ -1.27
PTPN9-204ENST00000564970 TRAIPQ9BWF2 469 aa7.13□□□□□ -1.27
PTPN9-204ENST00000564970 USP26Q9BXU7 913 aa7.13□□□□□ -1.27
PTPN9-204ENST00000564970 ZWILCHQ9H900 591 aa7.13□□□□□ -1.27
PTPN9-204ENST00000564970 EBF2Q9HAK2 575 aa7.13□□□□□ -1.27
PTPN9-204ENST00000564970 EXOC1Q9NV70 894 aa7.13□□□□□ -1.27
PTPN9-204ENST00000564970 ZNHIT6Q9NWK9 470 aaKnown RBP7.13□□□□□ -1.27
PTPN9-204ENST00000564970 ANKIB1Q9P2G1 1089 aa7.13□□□□□ -1.27
PTPN9-204ENST00000564970 CTNNAL1Q9UBT7 734 aa7.13□□□□□ -1.27
PTPN9-204ENST00000564970 L1RE1Q9UN81 338 aa7.13□□□□□ -1.27
PTPN9-204ENST00000564970 FGD5Q6ZNL6 1462 aa7.12□□□□□ -1.27
PTPN9-204ENST00000564970 PTPRKQ15262 1439 aa7.12□□□□□ -1.27
PTPN9-204ENST00000564970 TARSL2A2RTX5 802 aaKnown RBP7.12□□□□□ -1.27
PTPN9-204ENST00000564970 RASSF10A6NK89 507 aa7.12□□□□□ -1.27
PTPN9-204ENST00000564970 H3BQF6 201 aa7.12□□□□□ -1.27
PTPN9-204ENST00000564970 NPHP1O15259 732 aa7.12□□□□□ -1.27
PTPN9-204ENST00000564970 RAD21O60216 631 aa7.12□□□□□ -1.27
PTPN9-204ENST00000564970 BCAR3O75815 825 aa7.12□□□□□ -1.27
PTPN9-204ENST00000564970 RNF8O76064 485 aa7.12□□□□□ -1.27
PTPN9-204ENST00000564970 PYGLP06737 847 aa7.12□□□□□ -1.27
PTPN9-204ENST00000564970 MSL3P1P0C860 447 aa7.12□□□□□ -1.27
PTPN9-204ENST00000564970 TRIM21P19474 475 aaKnown RBP7.12□□□□□ -1.27
PTPN9-204ENST00000564970 SYT1P21579 422 aa7.12□□□□□ -1.27
PTPN9-204ENST00000564970 MRPS25P82663 173 aaKnown RBP7.12□□□□□ -1.27
PTPN9-204ENST00000564970 CCZ1BP86790 482 aa7.12□□□□□ -1.27
PTPN9-204ENST00000564970 CCZ1P86791 482 aaPredicted RBP7.12□□□□□ -1.27
PTPN9-204ENST00000564970 TYRO3Q06418 890 aa7.12□□□□□ -1.27
PTPN9-204ENST00000564970 KCNB1Q14721 858 aa7.12□□□□□ -1.27
PTPN9-204ENST00000564970 SEPT2Q15019 361 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms