RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 GRIK5Q16478 980 aa23.17■■□□□ 1.3
CLN6-204ENST00000564752 ALDH1A1P00352 501 aa23.16■■□□□ 1.3
CLN6-204ENST00000564752 BCAMP50895 628 aa23.16■■□□□ 1.3
CLN6-204ENST00000564752 PKN2Q16513 984 aaKnown RBP23.16■■□□□ 1.3
CLN6-204ENST00000564752 TBC1D22AQ8WUA7 517 aa23.16■■□□□ 1.3
CLN6-204ENST00000564752 WNK4Q96J92 1243 aa23.16■■□□□ 1.3
CLN6-204ENST00000564752 R3HDMLQ9H3Y0 253 aa23.16■■□□□ 1.3
CLN6-204ENST00000564752 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.16■■□□□ 1.3
CLN6-204ENST00000564752 FRAT2O75474 233 aaPredicted RBP23.15■■□□□ 1.3
CLN6-204ENST00000564752 FGFR2P21802 821 aa23.15■■□□□ 1.3
CLN6-204ENST00000564752 RFX5P48382 616 aaPredicted RBP23.15■■□□□ 1.3
CLN6-204ENST00000564752 SOX10P56693 466 aa23.15■■□□□ 1.3
CLN6-204ENST00000564752 CHAF1AQ13111 956 aaPredicted RBP23.15■■□□□ 1.3
CLN6-204ENST00000564752 HDLBPQ00341 1268 aaKnown RBP23.14■■□□□ 1.29
CLN6-204ENST00000564752 IFNL1Q8IU54 200 aa23.14■■□□□ 1.29
CLN6-204ENST00000564752 ANKRD13AQ8IZ07 590 aa23.14■■□□□ 1.29
CLN6-204ENST00000564752 TEPSINQ96N21 525 aa23.14■■□□□ 1.29
CLN6-204ENST00000564752 MRIQ9BWK5 157 aa23.14■■□□□ 1.29
CLN6-204ENST00000564752 KIF16BQ96L93 1317 aa23.13■■□□□ 1.29
CLN6-204ENST00000564752 EYA2O00167 538 aa23.13■■□□□ 1.29
CLN6-204ENST00000564752 IFIT1P09914 478 aaKnown RBP23.13■■□□□ 1.29
CLN6-204ENST00000564752 PUM3Q15397 648 aaKnown RBP23.13■■□□□ 1.29
CLN6-204ENST00000564752 HPS5Q9UPZ3 1129 aa23.13■■□□□ 1.29
CLN6-204ENST00000564752 TCP10L2B9ZVM9 353 aa23.12■■□□□ 1.29
CLN6-204ENST00000564752 FKTNO75072 461 aa23.12■■□□□ 1.29
CLN6-204ENST00000564752 HNRNPUQ00839 825 aaKnown RBP eCLIP23.12■■□□□ 1.29
CLN6-204ENST00000564752 ECM29Q5VYK3 1845 aa23.12■■□□□ 1.29
CLN6-204ENST00000564752 GJA5P36382 358 aa23.11■■□□□ 1.29
CLN6-204ENST00000564752 CDAN1Q8IWY9 1227 aa23.11■■□□□ 1.29
CLN6-204ENST00000564752 TMEM39BQ9GZU3 492 aa23.11■■□□□ 1.29
CLN6-204ENST00000564752 NOB1Q9ULX3 412 aaKnown RBP23.11■■□□□ 1.29
CLN6-204ENST00000564752 PDE4DIPQ5VU43 2346 aa23.11■■□□□ 1.29
CLN6-204ENST00000564752 IGF2BP3O00425 579 aaKnown RBP eCLIP23.1■■□□□ 1.29
CLN6-204ENST00000564752 TNNI2P48788 182 aa23.1■■□□□ 1.29
CLN6-204ENST00000564752 ATG9AQ7Z3C6 839 aa23.1■■□□□ 1.29
CLN6-204ENST00000564752 TEKT1Q969V4 418 aa23.1■■□□□ 1.29
CLN6-204ENST00000564752 API5Q9BZZ5 524 aaKnown RBP23.1■■□□□ 1.29
CLN6-204ENST00000564752 SUGT1Q9Y2Z0 365 aa23.1■■□□□ 1.29
CLN6-204ENST00000564752 RARSP54136 660 aaKnown RBP23.09■■□□□ 1.29
CLN6-204ENST00000564752 LPIN2Q92539 896 aa23.09■■□□□ 1.29
CLN6-204ENST00000564752 ZDHHC15Q96MV8 337 aa23.09■■□□□ 1.29
CLN6-204ENST00000564752 TESPA1A2RU30 521 aaPredicted RBP23.08■■□□□ 1.29
CLN6-204ENST00000564752 UBTFL1P0CB47 393 aaPredicted RBP23.08■■□□□ 1.29
CLN6-204ENST00000564752 SLC5A1P13866 664 aa23.08■■□□□ 1.29
CLN6-204ENST00000564752 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.08■■□□□ 1.29
CLN6-204ENST00000564752 ELP3Q9H9T3 547 aa23.08■■□□□ 1.29
CLN6-204ENST00000564752 FBXO3Q9UK99 471 aa23.08■■□□□ 1.29
CLN6-204ENST00000564752 MAP3K9P80192 1104 aa23.07■■□□□ 1.28
CLN6-204ENST00000564752 OTUD7BQ6GQQ9 843 aa23.07■■□□□ 1.28
CLN6-204ENST00000564752 APOBEC3HQ6NTF7 200 aaKnown RBP23.07■■□□□ 1.28
CLN6-204ENST00000564752 FBXO46Q6PJ61 603 aaPredicted RBP23.07■■□□□ 1.28
CLN6-204ENST00000564752 PTPN18Q99952 460 aa23.07■■□□□ 1.28
CLN6-204ENST00000564752 CACNB3P54284 484 aa23.06■■□□□ 1.28
CLN6-204ENST00000564752 HHIPL2Q6UWX4 724 aa23.06■■□□□ 1.28
CLN6-204ENST00000564752 OPTNQ96CV9 577 aa23.06■■□□□ 1.28
CLN6-204ENST00000564752 MAST3O60307 1309 aa23.06■■□□□ 1.28
CLN6-204ENST00000564752 CIAO1O76071 339 aa23.05■■□□□ 1.28
CLN6-204ENST00000564752 FKBP1CQ5VVH2 108 aa23.05■■□□□ 1.28
CLN6-204ENST00000564752 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.05■■□□□ 1.28
CLN6-204ENST00000564752 WDR66Q8TBY9 1149 aa23.05■■□□□ 1.28
CLN6-204ENST00000564752 MS4A4AQ96JQ5 239 aa23.05■■□□□ 1.28
CLN6-204ENST00000564752 VGLL4Q14135 290 aa23.04■■□□□ 1.28
CLN6-204ENST00000564752 FAM83AQ86UY5 434 aa23.04■■□□□ 1.28
CLN6-204ENST00000564752 SIL1Q9H173 461 aa23.04■■□□□ 1.28
CLN6-204ENST00000564752 TMOD2Q9NZR1 351 aa23.04■■□□□ 1.28
CLN6-204ENST00000564752 CEP126Q9P2H0 1117 aa23.04■■□□□ 1.28
CLN6-204ENST00000564752 HDAC5Q9UQL6 1122 aa23.04■■□□□ 1.28
CLN6-204ENST00000564752 ARAP2Q8WZ64 1704 aa23.04■■□□□ 1.28
CLN6-204ENST00000564752 CRHR2Q13324 411 aa23.03■■□□□ 1.28
CLN6-204ENST00000564752 CNKSR2Q8WXI2 1034 aa23.03■■□□□ 1.28
CLN6-204ENST00000564752 LRRFIP2Q9Y608 721 aaKnown RBP23.03■■□□□ 1.28
CLN6-204ENST00000564752 ATP2B3Q16720 1220 aa23.02■■□□□ 1.28
CLN6-204ENST00000564752 ARHGAP45Q92619 1136 aa23.02■■□□□ 1.28
CLN6-204ENST00000564752 CSADQ9Y600 493 aa23.02■■□□□ 1.28
CLN6-204ENST00000564752 IL15P40933 162 aaPredicted RBP23.01■■□□□ 1.27
CLN6-204ENST00000564752 TRIM17Q9Y577 477 aa23.01■■□□□ 1.27
CLN6-204ENST00000564752 GTF2A2P52657 109 aa23■■□□□ 1.27
CLN6-204ENST00000564752 OTOP1Q7RTM1 612 aa23■■□□□ 1.27
CLN6-204ENST00000564752 BRI3BPQ8WY22 251 aa23■■□□□ 1.27
CLN6-204ENST00000564752 HOOK2Q96ED9 719 aa23■■□□□ 1.27
CLN6-204ENST00000564752 MEIS3Q99687 375 aa23■■□□□ 1.27
CLN6-204ENST00000564752 COPRSQ9NQ92 184 aa23■■□□□ 1.27
CLN6-204ENST00000564752 GNL3LQ9NVN8 582 aaKnown RBP23■■□□□ 1.27
CLN6-204ENST00000564752 PA2G4Q9UQ80 394 aaKnown RBP23■■□□□ 1.27
CLN6-204ENST00000564752 IPO8O15397 1037 aaKnown RBP22.99■■□□□ 1.27
CLN6-204ENST00000564752 INTS3Q68E01 1043 aaKnown RBP22.99■■□□□ 1.27
CLN6-204ENST00000564752 ERO1AQ96HE7 468 aa22.99■■□□□ 1.27
CLN6-204ENST00000564752 ZBED9Q6R2W3 1325 aa22.99■■□□□ 1.27
CLN6-204ENST00000564752 CCL15-CCL14A0A0B4J2E2 113 aa22.98■■□□□ 1.27
CLN6-204ENST00000564752 CCL15Q16663 113 aa22.98■■□□□ 1.27
CLN6-204ENST00000564752 FRAT1Q92837 279 aaPredicted RBP22.98■■□□□ 1.27
CLN6-204ENST00000564752 OTUD5Q96G74 571 aa22.98■■□□□ 1.27
CLN6-204ENST00000564752 DAGLAQ9Y4D2 1042 aa22.98■■□□□ 1.27
CLN6-204ENST00000564752 SNCAIPQ9Y6H5 919 aa22.98■■□□□ 1.27
CLN6-204ENST00000564752 LAMB1P07942 1786 aa22.97■■□□□ 1.27
CLN6-204ENST00000564752 SPDYE5A6NIY4 337 aa22.97■■□□□ 1.27
CLN6-204ENST00000564752 ZBTB22O15209 634 aa22.97■■□□□ 1.27
CLN6-204ENST00000564752 BCAR3O75815 825 aa22.97■■□□□ 1.27
CLN6-204ENST00000564752 PRDX5P30044 214 aa22.97■■□□□ 1.27
CLN6-204ENST00000564752 SP3Q02447 781 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms