RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 GPATCH3Q96I76 525 aa19.52■□□□□ 0.72
RAB40C-208ENST00000564703 SNRKQ9NRH2 765 aa19.52■□□□□ 0.72
RAB40C-208ENST00000564703 LRP2BPQ9P2M1 347 aa19.52■□□□□ 0.72
RAB40C-208ENST00000564703 WNT10BO00744 389 aa19.51■□□□□ 0.71
RAB40C-208ENST00000564703 MTMR14Q8NCE2 650 aa19.51■□□□□ 0.71
RAB40C-208ENST00000564703 CRKP46108 304 aa19.5■□□□□ 0.71
RAB40C-208ENST00000564703 NBPF9Q3BBW0 867 aa19.5■□□□□ 0.71
RAB40C-208ENST00000564703 DZIP1Q86YF9 867 aaKnown RBP19.5■□□□□ 0.71
RAB40C-208ENST00000564703 SULF1Q8IWU6 871 aa19.5■□□□□ 0.71
RAB40C-208ENST00000564703 RAI14Q9P0K7 980 aa19.5■□□□□ 0.71
RAB40C-208ENST00000564703 IGHDP01880 384 aa19.49■□□□□ 0.71
RAB40C-208ENST00000564703 PRDX5P30044 214 aa19.49■□□□□ 0.71
RAB40C-208ENST00000564703 GRIK5Q16478 980 aa19.49■□□□□ 0.71
RAB40C-208ENST00000564703 ANGEL2Q5VTE6 544 aaKnown RBP19.49■□□□□ 0.71
RAB40C-208ENST00000564703 HHIPL2Q6UWX4 724 aa19.49■□□□□ 0.71
RAB40C-208ENST00000564703 PI16Q6UXB8 463 aa19.49■□□□□ 0.71
RAB40C-208ENST00000564703 TBC1D9Q6ZT07 1266 aa19.49■□□□□ 0.71
RAB40C-208ENST00000564703 KRT26Q7Z3Y9 468 aa19.49■□□□□ 0.71
RAB40C-208ENST00000564703 GGA3Q9NZ52 723 aa19.49■□□□□ 0.71
RAB40C-208ENST00000564703 SPDYE2BA6NHP3 402 aa19.48■□□□□ 0.71
RAB40C-208ENST00000564703 LDHCP07864 332 aa19.48■□□□□ 0.71
RAB40C-208ENST00000564703 SPDYE6P0CI01 402 aa19.48■□□□□ 0.71
RAB40C-208ENST00000564703 ZAP70P43403 619 aa19.48■□□□□ 0.71
RAB40C-208ENST00000564703 GSTO1P78417 241 aa19.48■□□□□ 0.71
RAB40C-208ENST00000564703 USP48Q86UV5 1035 aa19.48■□□□□ 0.71
RAB40C-208ENST00000564703 PRMT6Q96LA8 375 aaPredicted RBP19.48■□□□□ 0.71
RAB40C-208ENST00000564703 ITGBL1O95965 494 aaPredicted RBP19.47■□□□□ 0.71
RAB40C-208ENST00000564703 ATP5JP18859 108 aa19.47■□□□□ 0.71
RAB40C-208ENST00000564703 TTF1Q15361 905 aaPredicted RBP19.47■□□□□ 0.71
RAB40C-208ENST00000564703 B4GALNT3Q6L9W6 998 aa19.47■□□□□ 0.71
RAB40C-208ENST00000564703 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.47■□□□□ 0.71
RAB40C-208ENST00000564703 ECHDC1Q9NTX5 307 aa19.47■□□□□ 0.71
RAB40C-208ENST00000564703 POLR2AP24928 1970 aaKnown RBP19.46■□□□□ 0.71
RAB40C-208ENST00000564703 ZNF646O15015 1829 aaPredicted RBP19.46■□□□□ 0.71
RAB40C-208ENST00000564703 IGSF3O75054 1194 aa19.46■□□□□ 0.71
RAB40C-208ENST00000564703 CYP2E1P05181 493 aaPredicted RBP19.46■□□□□ 0.71
RAB40C-208ENST00000564703 SMC5Q8IY18 1101 aa19.46■□□□□ 0.71
RAB40C-208ENST00000564703 ZBED3Q96IU2 234 aaPredicted RBP19.46■□□□□ 0.71
RAB40C-208ENST00000564703 ZDHHC15Q96MV8 337 aa19.46■□□□□ 0.71
RAB40C-208ENST00000564703 GLIS2Q9BZE0 524 aaPredicted RBP19.46■□□□□ 0.71
RAB40C-208ENST00000564703 BOLA2Q9H3K6 86 aa19.46■□□□□ 0.71
RAB40C-208ENST00000564703 TMOD2Q9NZR1 351 aa19.46■□□□□ 0.71
RAB40C-208ENST00000564703 COL1A1P02452 1464 aaPredicted RBP19.46■□□□□ 0.71
RAB40C-208ENST00000564703 PITPNM2Q9BZ72 1349 aa19.46■□□□□ 0.71
RAB40C-208ENST00000564703 APOBEC3FQ8IUX4 373 aaKnown RBP19.45■□□□□ 0.7
RAB40C-208ENST00000564703 DNAJC2Q99543 621 aaKnown RBP19.45■□□□□ 0.7
RAB40C-208ENST00000564703 NOL10Q9BSC4 688 aaKnown RBP19.45■□□□□ 0.7
RAB40C-208ENST00000564703 TDRD3Q9H7E2 651 aaKnown RBP19.45■□□□□ 0.7
RAB40C-208ENST00000564703 VEZTQ9HBM0 779 aa19.45■□□□□ 0.7
RAB40C-208ENST00000564703 ASTN2O75129 1339 aaPredicted RBP19.45■□□□□ 0.7
RAB40C-208ENST00000564703 CLRN2A0PK11 232 aa19.44■□□□□ 0.7
RAB40C-208ENST00000564703 ERC2O15083 957 aa19.44■□□□□ 0.7
RAB40C-208ENST00000564703 HSPA6P17066 643 aa19.44■□□□□ 0.7
RAB40C-208ENST00000564703 APLP1P51693 650 aa19.44■□□□□ 0.7
RAB40C-208ENST00000564703 MECOMQ03112 1051 aa19.44■□□□□ 0.7
RAB40C-208ENST00000564703 MAP3K12Q12852 859 aa19.44■□□□□ 0.7
RAB40C-208ENST00000564703 DIXDC1Q155Q3 683 aa19.44■□□□□ 0.7
RAB40C-208ENST00000564703 ZNF70Q9UC06 446 aaPredicted RBP19.44■□□□□ 0.7
RAB40C-208ENST00000564703 PCDHAC2Q9Y5I4 1007 aa19.44■□□□□ 0.7
RAB40C-208ENST00000564703 ADAMTSL1Q8N6G6 1762 aa19.43■□□□□ 0.7
RAB40C-208ENST00000564703 IDH1O75874 414 aaKnown RBP19.43■□□□□ 0.7
RAB40C-208ENST00000564703 TNNI2P48788 182 aa19.43■□□□□ 0.7
RAB40C-208ENST00000564703 TNFAIP1Q13829 316 aa19.43■□□□□ 0.7
RAB40C-208ENST00000564703 NAA16Q6N069 864 aaPredicted RBP19.43■□□□□ 0.7
RAB40C-208ENST00000564703 FAM163AQ96GL9 167 aaPredicted RBP19.43■□□□□ 0.7
RAB40C-208ENST00000564703 GOLIM4O00461 696 aa19.42■□□□□ 0.7
RAB40C-208ENST00000564703 TRAF5O00463 557 aa19.42■□□□□ 0.7
RAB40C-208ENST00000564703 NSUN4Q96CB9 384 aaKnown RBP19.42■□□□□ 0.7
RAB40C-208ENST00000564703 HAUS7Q99871 368 aa19.42■□□□□ 0.7
RAB40C-208ENST00000564703 LNPKQ9C0E8 428 aa19.42■□□□□ 0.7
RAB40C-208ENST00000564703 ZNF408Q9H9D4 720 aa19.42■□□□□ 0.7
RAB40C-208ENST00000564703 DAGLAQ9Y4D2 1042 aa19.42■□□□□ 0.7
RAB40C-208ENST00000564703 NDUFB9Q9Y6M9 179 aa19.42■□□□□ 0.7
RAB40C-208ENST00000564703 TTC41PQ6P2S7 1318 aa19.42■□□□□ 0.7
RAB40C-208ENST00000564703 ADM5C9JUS6 153 aa19.41■□□□□ 0.7
RAB40C-208ENST00000564703 MX1P20591 662 aa19.41■□□□□ 0.7
RAB40C-208ENST00000564703 NF2P35240 595 aa19.41■□□□□ 0.7
RAB40C-208ENST00000564703 NUCB1Q02818 461 aa19.41■□□□□ 0.7
RAB40C-208ENST00000564703 SPDYE2Q495Y8 402 aa19.41■□□□□ 0.7
RAB40C-208ENST00000564703 APOBEC3HQ6NTF7 200 aaKnown RBP19.41■□□□□ 0.7
RAB40C-208ENST00000564703 CHD1LQ86WJ1 897 aa19.41■□□□□ 0.7
RAB40C-208ENST00000564703 ANTXR1Q9H6X2 564 aa19.41■□□□□ 0.7
RAB40C-208ENST00000564703 PIH1D3Q9NQM4 214 aaKnown RBP19.41■□□□□ 0.7
RAB40C-208ENST00000564703 USP40Q9NVE5 1235 aa19.41■□□□□ 0.7
RAB40C-208ENST00000564703 PAG1Q9NWQ8 432 aa19.41■□□□□ 0.7
RAB40C-208ENST00000564703 PASKQ96RG2 1323 aa19.41■□□□□ 0.7
RAB40C-208ENST00000564703 AKAP11Q9UKA4 1901 aa19.41■□□□□ 0.7
RAB40C-208ENST00000564703 TMEM88BA6NKF7 163 aa19.4■□□□□ 0.7
RAB40C-208ENST00000564703 BAG3O95817 575 aa19.4■□□□□ 0.7
RAB40C-208ENST00000564703 TMED8Q6PL24 325 aaPredicted RBP19.4■□□□□ 0.7
RAB40C-208ENST00000564703 DEFB129Q9H1M3 183 aa19.4■□□□□ 0.7
RAB40C-208ENST00000564703 SCAF8Q9UPN6 1271 aaKnown RBP19.4■□□□□ 0.7
RAB40C-208ENST00000564703 TCP10L2B9ZVM9 353 aa19.39■□□□□ 0.69
RAB40C-208ENST00000564703 GLRX3O76003 335 aaKnown RBP19.39■□□□□ 0.69
RAB40C-208ENST00000564703 CELF2O95319 508 aaKnown RBP19.39■□□□□ 0.69
RAB40C-208ENST00000564703 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.39■□□□□ 0.69
RAB40C-208ENST00000564703 PPP2R3BQ9Y5P8 575 aa19.39■□□□□ 0.69
RAB40C-208ENST00000564703 MROH7-TTC4A0A0A0MT08 1334 aa19.39■□□□□ 0.69
RAB40C-208ENST00000564703 MYH2Q9UKX2 1941 aa19.39■□□□□ 0.69
RAB40C-208ENST00000564703 GPR75-ASB3A0A0A6YYF3 556 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms