RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 CRKP46108 304 aa18.73■□□□□ 0.59
SPG7-210ENST00000564409 TNNI2P48788 182 aa18.73■□□□□ 0.59
SPG7-210ENST00000564409 RARSP54136 660 aaKnown RBP18.73■□□□□ 0.59
SPG7-210ENST00000564409 PRKG1Q13976 671 aa18.73■□□□□ 0.59
SPG7-210ENST00000564409 RASA3Q14644 834 aa18.73■□□□□ 0.59
SPG7-210ENST00000564409 SPRYD7Q5W111 196 aa18.73■□□□□ 0.59
SPG7-210ENST00000564409 CFHR5Q9BXR6 569 aa18.73■□□□□ 0.59
SPG7-210ENST00000564409 ZNF70Q9UC06 446 aaPredicted RBP18.73■□□□□ 0.59
SPG7-210ENST00000564409 MANSC4A6NHS7 340 aaPredicted RBP18.72■□□□□ 0.59
SPG7-210ENST00000564409 TEKT1Q969V4 418 aa18.72■□□□□ 0.59
SPG7-210ENST00000564409 IPO8O15397 1037 aaKnown RBP18.71■□□□□ 0.59
SPG7-210ENST00000564409 BCAMP50895 628 aa18.71■□□□□ 0.59
SPG7-210ENST00000564409 CHAF1AQ13111 956 aaPredicted RBP18.71■□□□□ 0.59
SPG7-210ENST00000564409 NBPF12Q5TAG4 269 aaPredicted RBP18.71■□□□□ 0.59
SPG7-210ENST00000564409 CTU1Q7Z7A3 348 aaKnown RBP18.71■□□□□ 0.59
SPG7-210ENST00000564409 WDR66Q8TBY9 1149 aa18.71■□□□□ 0.59
SPG7-210ENST00000564409 TDRD3Q9H7E2 651 aaKnown RBP18.71■□□□□ 0.59
SPG7-210ENST00000564409 CEP126Q9P2H0 1117 aa18.71■□□□□ 0.59
SPG7-210ENST00000564409 IQSEC3Q9UPP2 1182 aaPredicted RBP18.71■□□□□ 0.59
SPG7-210ENST00000564409 SSC5DA1L4H1 1573 aa18.71■□□□□ 0.59
SPG7-210ENST00000564409 ZBTB22O15209 634 aa18.7■□□□□ 0.58
SPG7-210ENST00000564409 GNAI3P08754 354 aa18.7■□□□□ 0.58
SPG7-210ENST00000564409 RGS19P49795 217 aa18.7■□□□□ 0.58
SPG7-210ENST00000564409 PKN2Q16513 984 aaKnown RBP18.7■□□□□ 0.58
SPG7-210ENST00000564409 FKBP1CQ5VVH2 108 aa18.7■□□□□ 0.58
SPG7-210ENST00000564409 INTS3Q68E01 1043 aaKnown RBP18.7■□□□□ 0.58
SPG7-210ENST00000564409 ATG9AQ7Z3C6 839 aa18.7■□□□□ 0.58
SPG7-210ENST00000564409 ANKRD13AQ8IZ07 590 aa18.7■□□□□ 0.58
SPG7-210ENST00000564409 ZDHHC15Q96MV8 337 aa18.7■□□□□ 0.58
SPG7-210ENST00000564409 GNL3LQ9NVN8 582 aaKnown RBP18.7■□□□□ 0.58
SPG7-210ENST00000564409 USP2O75604 605 aaPredicted RBP18.69■□□□□ 0.58
SPG7-210ENST00000564409 IL15P40933 162 aaPredicted RBP18.69■□□□□ 0.58
SPG7-210ENST00000564409 HHIPL2Q6UWX4 724 aa18.69■□□□□ 0.58
SPG7-210ENST00000564409 HOOK2Q96ED9 719 aa18.69■□□□□ 0.58
SPG7-210ENST00000564409 WNK4Q96J92 1243 aa18.69■□□□□ 0.58
SPG7-210ENST00000564409 TMOD2Q9NZR1 351 aa18.69■□□□□ 0.58
SPG7-210ENST00000564409 AOX1Q06278 1338 aa18.69■□□□□ 0.58
SPG7-210ENST00000564409 COPRSQ9NQ92 184 aa18.68■□□□□ 0.58
SPG7-210ENST00000564409 LRRFIP2Q9Y608 721 aaKnown RBP18.68■□□□□ 0.58
SPG7-210ENST00000564409 SEMA3EO15041 775 aa18.67■□□□□ 0.58
SPG7-210ENST00000564409 MKRN3Q13064 507 aaKnown RBP18.67■□□□□ 0.58
SPG7-210ENST00000564409 ATP2B3Q16720 1220 aa18.67■□□□□ 0.58
SPG7-210ENST00000564409 OTUD7BQ6GQQ9 843 aa18.67■□□□□ 0.58
SPG7-210ENST00000564409 FAM83AQ86UY5 434 aa18.67■□□□□ 0.58
SPG7-210ENST00000564409 TEPSINQ96N21 525 aa18.67■□□□□ 0.58
SPG7-210ENST00000564409 TCP10L2B9ZVM9 353 aa18.66■□□□□ 0.58
SPG7-210ENST00000564409 GPR25O00155 361 aa18.66■□□□□ 0.58
SPG7-210ENST00000564409 TBC1D8O95759 1140 aa18.66■□□□□ 0.58
SPG7-210ENST00000564409 CLMNQ96JQ2 1002 aa18.66■□□□□ 0.58
SPG7-210ENST00000564409 OTOFQ9HC10 1997 aa18.65■□□□□ 0.58
SPG7-210ENST00000564409 MTX1Q13505 466 aa18.65■□□□□ 0.58
SPG7-210ENST00000564409 GRIK5Q16478 980 aa18.65■□□□□ 0.58
SPG7-210ENST00000564409 IFNL1Q8IU54 200 aa18.65■□□□□ 0.58
SPG7-210ENST00000564409 ZNF296Q8WUU4 475 aaPredicted RBP18.65■□□□□ 0.58
SPG7-210ENST00000564409 MEIS3Q99687 375 aa18.65■□□□□ 0.58
SPG7-210ENST00000564409 SIL1Q9H173 461 aa18.65■□□□□ 0.58
SPG7-210ENST00000564409 FZD1Q9UP38 647 aa18.65■□□□□ 0.58
SPG7-210ENST00000564409 FKTNO75072 461 aa18.64■□□□□ 0.57
SPG7-210ENST00000564409 APOBEC3HQ6NTF7 200 aaKnown RBP18.64■□□□□ 0.57
SPG7-210ENST00000564409 TMEM39BQ9GZU3 492 aa18.64■□□□□ 0.57
SPG7-210ENST00000564409 DENND2AQ9ULE3 1009 aa18.64■□□□□ 0.57
SPG7-210ENST00000564409 SALL1Q9NSC2 1324 aa18.64■□□□□ 0.57
SPG7-210ENST00000564409 TESPA1A2RU30 521 aaPredicted RBP18.63■□□□□ 0.57
SPG7-210ENST00000564409 MAP3K9P80192 1104 aa18.63■□□□□ 0.57
SPG7-210ENST00000564409 MLLT1Q03111 559 aaPredicted RBP18.63■□□□□ 0.57
SPG7-210ENST00000564409 ATF7IPQ6VMQ6 1270 aa18.63■□□□□ 0.57
SPG7-210ENST00000564409 ZGPATQ8N5A5 531 aaKnown RBP18.63■□□□□ 0.57
SPG7-210ENST00000564409 AKAP2Q9Y2D5 859 aa18.63■□□□□ 0.57
SPG7-210ENST00000564409 CSADQ9Y600 493 aa18.63■□□□□ 0.57
SPG7-210ENST00000564409 RPAP1Q9BWH6 1393 aaPredicted RBP18.63■□□□□ 0.57
SPG7-210ENST00000564409 PDS5AQ29RF7 1337 aaKnown RBP18.62■□□□□ 0.57
SPG7-210ENST00000564409 SRGAP3O43295 1099 aa18.61■□□□□ 0.57
SPG7-210ENST00000564409 LDHBP07195 334 aaKnown RBP18.61■□□□□ 0.57
SPG7-210ENST00000564409 TRIM27P14373 513 aa18.61■□□□□ 0.57
SPG7-210ENST00000564409 DCAF15Q66K64 600 aa18.61■□□□□ 0.57
SPG7-210ENST00000564409 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.61■□□□□ 0.57
SPG7-210ENST00000564409 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.61■□□□□ 0.57
SPG7-210ENST00000564409 AK9Q5TCS8 1911 aa18.61■□□□□ 0.57
SPG7-210ENST00000564409 GNAI2P04899 355 aa18.6■□□□□ 0.57
SPG7-210ENST00000564409 OPTNQ96CV9 577 aa18.6■□□□□ 0.57
SPG7-210ENST00000564409 ELP3Q9H9T3 547 aa18.6■□□□□ 0.57
SPG7-210ENST00000564409 PA2G4Q9UQ80 394 aaKnown RBP18.6■□□□□ 0.57
SPG7-210ENST00000564409 MYH2Q9UKX2 1941 aa18.59■□□□□ 0.57
SPG7-210ENST00000564409 IGF2BP3O00425 579 aaKnown RBP eCLIP18.59■□□□□ 0.57
SPG7-210ENST00000564409 GJA5P36382 358 aa18.59■□□□□ 0.57
SPG7-210ENST00000564409 GTF2A2P52657 109 aa18.59■□□□□ 0.57
SPG7-210ENST00000564409 VGLL4Q14135 290 aa18.59■□□□□ 0.57
SPG7-210ENST00000564409 CCDC102BQ68D86 513 aa18.59■□□□□ 0.57
SPG7-210ENST00000564409 FBXO46Q6PJ61 603 aaPredicted RBP18.59■□□□□ 0.57
SPG7-210ENST00000564409 FAM151AQ8WW52 585 aa18.59■□□□□ 0.57
SPG7-210ENST00000564409 BCAR3O75815 825 aa18.58■□□□□ 0.56
SPG7-210ENST00000564409 PHKA1P46020 1223 aa18.58■□□□□ 0.56
SPG7-210ENST00000564409 CACNB3P54284 484 aa18.58■□□□□ 0.56
SPG7-210ENST00000564409 MVPQ14764 893 aaKnown RBP18.58■□□□□ 0.56
SPG7-210ENST00000564409 SPTY2D1Q68D10 685 aaPredicted RBP18.58■□□□□ 0.56
SPG7-210ENST00000564409 CDAN1Q8IWY9 1227 aa18.58■□□□□ 0.56
SPG7-210ENST00000564409 SLF2Q8IX21 1173 aa18.58■□□□□ 0.56
SPG7-210ENST00000564409 FRAT1Q92837 279 aaPredicted RBP18.58■□□□□ 0.56
SPG7-210ENST00000564409 MS4A4AQ96JQ5 239 aa18.58■□□□□ 0.56
SPG7-210ENST00000564409 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms