RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 GORABQ5T7V8 394 aa21.27■■□□□ 1
USB1-209ENST00000564387 MAST3O60307 1309 aa21.27■□□□□ 0.99
USB1-209ENST00000564387 MCAMP43121 646 aa21.26■□□□□ 0.99
USB1-209ENST00000564387 HHIPL2Q6UWX4 724 aa21.26■□□□□ 0.99
USB1-209ENST00000564387 SULF1Q8IWU6 871 aa21.26■□□□□ 0.99
USB1-209ENST00000564387 ZGPATQ8N5A5 531 aaKnown RBP21.26■□□□□ 0.99
USB1-209ENST00000564387 SPATA5Q8NB90 893 aa21.26■□□□□ 0.99
USB1-209ENST00000564387 TLR7Q9NYK1 1049 aaKnown RBP21.26■□□□□ 0.99
USB1-209ENST00000564387 AKAP11Q9UKA4 1901 aa21.25■□□□□ 0.99
USB1-209ENST00000564387 PRDX5P30044 214 aa21.25■□□□□ 0.99
USB1-209ENST00000564387 CCDC158Q5M9N0 1113 aa21.25■□□□□ 0.99
USB1-209ENST00000564387 ZDHHC15Q96MV8 337 aa21.25■□□□□ 0.99
USB1-209ENST00000564387 CCDC8Q9H0W5 538 aaPredicted RBP21.25■□□□□ 0.99
USB1-209ENST00000564387 AOX1Q06278 1338 aa21.25■□□□□ 0.99
USB1-209ENST00000564387 ADM5C9JUS6 153 aa21.24■□□□□ 0.99
USB1-209ENST00000564387 HTRA3P83110 453 aa21.24■□□□□ 0.99
USB1-209ENST00000564387 DLK2Q6UY11 383 aa21.24■□□□□ 0.99
USB1-209ENST00000564387 CLASRPQ8N2M8 674 aaKnown RBP21.24■□□□□ 0.99
USB1-209ENST00000564387 TEKT1Q969V4 418 aa21.24■□□□□ 0.99
USB1-209ENST00000564387 IL1RAPL2Q9NP60 686 aa21.24■□□□□ 0.99
USB1-209ENST00000564387 LDHBP07195 334 aaKnown RBP21.23■□□□□ 0.99
USB1-209ENST00000564387 SPDYE2Q495Y8 402 aa21.23■□□□□ 0.99
USB1-209ENST00000564387 APOBEC3HQ6NTF7 200 aaKnown RBP21.23■□□□□ 0.99
USB1-209ENST00000564387 PI16Q6UXB8 463 aa21.23■□□□□ 0.99
USB1-209ENST00000564387 AACSQ86V21 672 aa21.23■□□□□ 0.99
USB1-209ENST00000564387 APOBEC3FQ8IUX4 373 aaKnown RBP21.23■□□□□ 0.99
USB1-209ENST00000564387 MYO1BO43795 1136 aa21.22■□□□□ 0.99
USB1-209ENST00000564387 IGSF3O75054 1194 aa21.22■□□□□ 0.99
USB1-209ENST00000564387 TTC39AQ5SRH9 613 aa21.22■□□□□ 0.99
USB1-209ENST00000564387 FAM163AQ96GL9 167 aaPredicted RBP21.22■□□□□ 0.99
USB1-209ENST00000564387 LRRCC1Q9C099 1032 aa21.22■□□□□ 0.99
USB1-209ENST00000564387 CELF2O95319 508 aaKnown RBP21.21■□□□□ 0.99
USB1-209ENST00000564387 RBM5P52756 815 aaKnown RBP eCLIP21.21■□□□□ 0.99
USB1-209ENST00000564387 HDAC1Q13547 482 aaPredicted RBP21.21■□□□□ 0.99
USB1-209ENST00000564387 SPTY2D1Q68D10 685 aaPredicted RBP21.21■□□□□ 0.99
USB1-209ENST00000564387 ZNF70Q9UC06 446 aaPredicted RBP21.21■□□□□ 0.99
USB1-209ENST00000564387 EXOC6Q8TAG9 804 aa21.2■□□□□ 0.98
USB1-209ENST00000564387 ZNF384Q8TF68 577 aa21.2■□□□□ 0.98
USB1-209ENST00000564387 CDCA5Q96FF9 252 aa21.2■□□□□ 0.98
USB1-209ENST00000564387 PPP2R3BQ9Y5P8 575 aa21.2■□□□□ 0.98
USB1-209ENST00000564387 TLL2Q9Y6L7 1015 aa21.2■□□□□ 0.98
USB1-209ENST00000564387 GAKO14976 1311 aa21.2■□□□□ 0.98
USB1-209ENST00000564387 RASSF10A6NK89 507 aa21.19■□□□□ 0.98
USB1-209ENST00000564387 APBB1O00213 710 aa21.19■□□□□ 0.98
USB1-209ENST00000564387 CYP2E1P05181 493 aaPredicted RBP21.19■□□□□ 0.98
USB1-209ENST00000564387 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.19■□□□□ 0.98
USB1-209ENST00000564387 TDRD3Q9H7E2 651 aaKnown RBP21.19■□□□□ 0.98
USB1-209ENST00000564387 DAGLAQ9Y4D2 1042 aa21.19■□□□□ 0.98
USB1-209ENST00000564387 CLRN2A0PK11 232 aa21.18■□□□□ 0.98
USB1-209ENST00000564387 DIXDC1Q155Q3 683 aa21.18■□□□□ 0.98
USB1-209ENST00000564387 FKBP1CQ5VVH2 108 aa21.18■□□□□ 0.98
USB1-209ENST00000564387 TBC1D9Q6ZT07 1266 aa21.18■□□□□ 0.98
USB1-209ENST00000564387 ERICH6Q7L0X2 663 aa21.18■□□□□ 0.98
USB1-209ENST00000564387 SAPCD2Q86UD0 394 aa21.18■□□□□ 0.98
USB1-209ENST00000564387 KLRG1Q96E93 195 aa21.18■□□□□ 0.98
USB1-209ENST00000564387 HHIPL1Q96JK4 782 aa21.18■□□□□ 0.98
USB1-209ENST00000564387 DEFB129Q9H1M3 183 aa21.18■□□□□ 0.98
USB1-209ENST00000564387 ABCF2Q9UG63 623 aa21.18■□□□□ 0.98
USB1-209ENST00000564387 SCAF8Q9UPN6 1271 aaKnown RBP21.18■□□□□ 0.98
USB1-209ENST00000564387 CNTNAP1P78357 1384 aa21.18■□□□□ 0.98
USB1-209ENST00000564387 IFIT2P09913 472 aaKnown RBP21.17■□□□□ 0.98
USB1-209ENST00000564387 ZAP70P43403 619 aa21.17■□□□□ 0.98
USB1-209ENST00000564387 MECOMQ03112 1051 aa21.17■□□□□ 0.98
USB1-209ENST00000564387 NSUN4Q96CB9 384 aaKnown RBP21.17■□□□□ 0.98
USB1-209ENST00000564387 SNRKQ9NRH2 765 aa21.17■□□□□ 0.98
USB1-209ENST00000564387 FKBP1BP68106 108 aa21.16■□□□□ 0.98
USB1-209ENST00000564387 TNFAIP1Q13829 316 aa21.16■□□□□ 0.98
USB1-209ENST00000564387 SLF2Q8IX21 1173 aa21.16■□□□□ 0.98
USB1-209ENST00000564387 MYH2Q9UKX2 1941 aa21.16■□□□□ 0.98
USB1-209ENST00000564387 DZIP1Q86YF9 867 aaKnown RBP21.15■□□□□ 0.98
USB1-209ENST00000564387 GBA2Q9HCG7 927 aaPredicted RBP21.15■□□□□ 0.98
USB1-209ENST00000564387 GPR75-ASB3A0A0A6YYF3 556 aa21.14■□□□□ 0.97
USB1-209ENST00000564387 SMARCA5O60264 1052 aaPredicted RBP21.14■□□□□ 0.97
USB1-209ENST00000564387 ATP5JP18859 108 aa21.14■□□□□ 0.97
USB1-209ENST00000564387 RASA3Q14644 834 aa21.14■□□□□ 0.97
USB1-209ENST00000564387 DEFB115Q30KQ5 88 aa21.14■□□□□ 0.97
USB1-209ENST00000564387 PRAMEF18Q5VWM3 479 aa21.14■□□□□ 0.97
USB1-209ENST00000564387 CDC42EP5Q6NZY7 148 aa21.14■□□□□ 0.97
USB1-209ENST00000564387 FAM83AQ86UY5 434 aa21.14■□□□□ 0.97
USB1-209ENST00000564387 C2orf69Q8N8R5 385 aa21.14■□□□□ 0.97
USB1-209ENST00000564387 JMYQ8N9B5 988 aa21.14■□□□□ 0.97
USB1-209ENST00000564387 GCC1Q96CN9 775 aa21.14■□□□□ 0.97
USB1-209ENST00000564387 TEPSINQ96N21 525 aa21.14■□□□□ 0.97
USB1-209ENST00000564387 ZNF408Q9H9D4 720 aa21.14■□□□□ 0.97
USB1-209ENST00000564387 VEZTQ9HBM0 779 aa21.14■□□□□ 0.97
USB1-209ENST00000564387 PAPPA2Q9BXP8 1791 aa21.13■□□□□ 0.97
USB1-209ENST00000564387 MROH7-TTC4A0A0A0MT08 1334 aa21.13■□□□□ 0.97
USB1-209ENST00000564387 GSTO1P78417 241 aa21.13■□□□□ 0.97
USB1-209ENST00000564387 TMED8Q6PL24 325 aaPredicted RBP21.13■□□□□ 0.97
USB1-209ENST00000564387 PIH1D3Q9NQM4 214 aaKnown RBP21.13■□□□□ 0.97
USB1-209ENST00000564387 LRP2BPQ9P2M1 347 aa21.13■□□□□ 0.97
USB1-209ENST00000564387 ABT1Q9ULW3 272 aaKnown RBP21.13■□□□□ 0.97
USB1-209ENST00000564387 MYO5AQ9Y4I1 1855 aaKnown RBP21.12■□□□□ 0.97
USB1-209ENST00000564387 SSC5DA1L4H1 1573 aa21.12■□□□□ 0.97
USB1-209ENST00000564387 LDHCP07864 332 aa21.12■□□□□ 0.97
USB1-209ENST00000564387 DOCK2Q92608 1830 aa21.12■□□□□ 0.97
USB1-209ENST00000564387 MAST2Q6P0Q8 1798 aa21.12■□□□□ 0.97
USB1-209ENST00000564387 RFX7Q2KHR2 1363 aa21.11■□□□□ 0.97
USB1-209ENST00000564387 MAP4K4O95819 1239 aaPredicted RBP21.11■□□□□ 0.97
USB1-209ENST00000564387 TNNI2P48788 182 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms