RNA–Protein interactions for RNA: ENST00000564317.5

CDH11-209, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-209ENST00000564317 EPS15P42566 896 aa18.85■□□□□ 0.61
CDH11-209ENST00000564317 ZNF280AP59817 542 aaPredicted RBP18.85■□□□□ 0.61
CDH11-209ENST00000564317 MECOMQ03112 1051 aa18.85■□□□□ 0.61
CDH11-209ENST00000564317 TTF1Q15361 905 aaPredicted RBP18.85■□□□□ 0.61
CDH11-209ENST00000564317 SPTY2D1Q68D10 685 aaPredicted RBP18.85■□□□□ 0.61
CDH11-209ENST00000564317 ZNF526Q8TF50 670 aaPredicted RBP18.85■□□□□ 0.61
CDH11-209ENST00000564317 CNOT7Q9UIV1 285 aaKnown RBP18.85■□□□□ 0.61
CDH11-209ENST00000564317 MYO5AQ9Y4I1 1855 aaKnown RBP18.85■□□□□ 0.61
CDH11-209ENST00000564317 EGFRP00533 1210 aa18.84■□□□□ 0.61
CDH11-209ENST00000564317 CHGBP05060 677 aa18.84■□□□□ 0.61
CDH11-209ENST00000564317 DIXDC1Q155Q3 683 aa18.84■□□□□ 0.61
CDH11-209ENST00000564317 KBTBD3Q8NAB2 608 aa18.84■□□□□ 0.61
CDH11-209ENST00000564317 NSUN4Q96CB9 384 aaKnown RBP18.84■□□□□ 0.61
CDH11-209ENST00000564317 PCDHAC2Q9Y5I4 1007 aa18.84■□□□□ 0.61
CDH11-209ENST00000564317 SLFNL1Q499Z3 407 aa18.83■□□□□ 0.6
CDH11-209ENST00000564317 DZIP1Q86YF9 867 aaKnown RBP18.83■□□□□ 0.6
CDH11-209ENST00000564317 MAST3O60307 1309 aa18.82■□□□□ 0.6
CDH11-209ENST00000564317 TRIM6-TRIM34B2RNG4 842 aa18.82■□□□□ 0.6
CDH11-209ENST00000564317 PDE6AP16499 860 aa18.82■□□□□ 0.6
CDH11-209ENST00000564317 LMOD1P29536 600 aaPredicted RBP18.82■□□□□ 0.6
CDH11-209ENST00000564317 CRKP46108 304 aa18.82■□□□□ 0.6
CDH11-209ENST00000564317 SAMD7Q7Z3H4 446 aa18.82■□□□□ 0.6
CDH11-209ENST00000564317 TRPM4Q8TD43 1214 aa18.82■□□□□ 0.6
CDH11-209ENST00000564317 EVI5LQ96CN4 794 aa18.82■□□□□ 0.6
CDH11-209ENST00000564317 NMRK2Q9NPI5 230 aa18.82■□□□□ 0.6
CDH11-209ENST00000564317 HACL1Q9UJ83 578 aa18.82■□□□□ 0.6
CDH11-209ENST00000564317 HDAC9Q9UKV0 1011 aa18.82■□□□□ 0.6
CDH11-209ENST00000564317 H7C1D1 291 aa18.81■□□□□ 0.6
CDH11-209ENST00000564317 SDSP20132 328 aa18.81■□□□□ 0.6
CDH11-209ENST00000564317 MAP3K12Q12852 859 aa18.81■□□□□ 0.6
CDH11-209ENST00000564317 CFAP100Q494V2 611 aa18.81■□□□□ 0.6
CDH11-209ENST00000564317 TBC1D10BQ4KMP7 808 aaPredicted RBP18.81■□□□□ 0.6
CDH11-209ENST00000564317 ADGRA1Q86SQ6 560 aa18.81■□□□□ 0.6
CDH11-209ENST00000564317 CNTROBQ8N137 903 aa18.81■□□□□ 0.6
CDH11-209ENST00000564317 OGFOD1Q8N543 542 aa18.81■□□□□ 0.6
CDH11-209ENST00000564317 MAGEB6Q8N7X4 407 aa18.81■□□□□ 0.6
CDH11-209ENST00000564317 RILPL2Q969X0 211 aa18.81■□□□□ 0.6
CDH11-209ENST00000564317 FSD1Q9BTV5 496 aa18.81■□□□□ 0.6
CDH11-209ENST00000564317 RRAGCQ9HB90 399 aa18.81■□□□□ 0.6
CDH11-209ENST00000564317 MYOZ2Q9NPC6 264 aa18.81■□□□□ 0.6
CDH11-209ENST00000564317 SERPINA10Q9UK55 444 aa18.81■□□□□ 0.6
CDH11-209ENST00000564317 DAGLAQ9Y4D2 1042 aa18.81■□□□□ 0.6
CDH11-209ENST00000564317 GAKO14976 1311 aa18.8■□□□□ 0.6
CDH11-209ENST00000564317 TCRBV5S4A2TA0A5A2 114 aa18.8■□□□□ 0.6
CDH11-209ENST00000564317 YY1P25490 414 aa18.8■□□□□ 0.6
CDH11-209ENST00000564317 EPHX2P34913 555 aa18.8■□□□□ 0.6
CDH11-209ENST00000564317 ADD2P35612 726 aa18.8■□□□□ 0.6
CDH11-209ENST00000564317 HDLBPQ00341 1268 aaKnown RBP18.8■□□□□ 0.6
CDH11-209ENST00000564317 RBM26Q5T8P6 1007 aaKnown RBP18.8■□□□□ 0.6
CDH11-209ENST00000564317 SLC9C2Q5TAH2 1124 aa18.8■□□□□ 0.6
CDH11-209ENST00000564317 NAA16Q6N069 864 aaPredicted RBP18.8■□□□□ 0.6
CDH11-209ENST00000564317 TEKT1Q969V4 418 aa18.8■□□□□ 0.6
CDH11-209ENST00000564317 ZBED3Q96IU2 234 aaPredicted RBP18.8■□□□□ 0.6
CDH11-209ENST00000564317 TAF1DQ9H5J8 278 aaPredicted RBP18.8■□□□□ 0.6
CDH11-209ENST00000564317 SCN4AP35499 1836 aa18.79■□□□□ 0.6
CDH11-209ENST00000564317 MROH7-TTC4A0A0A0MT08 1334 aa18.79■□□□□ 0.6
CDH11-209ENST00000564317 ZNF532Q9HCE3 1301 aa18.79■□□□□ 0.6
CDH11-209ENST00000564317 IQCA1LA6NCM1 817 aa18.79■□□□□ 0.6
CDH11-209ENST00000564317 IGSF3O75054 1194 aa18.79■□□□□ 0.6
CDH11-209ENST00000564317 CYP7A1P22680 504 aa18.79■□□□□ 0.6
CDH11-209ENST00000564317 HIRAP54198 1017 aaPredicted RBP18.79■□□□□ 0.6
CDH11-209ENST00000564317 KIF4BQ2VIQ3 1234 aa18.79■□□□□ 0.6
CDH11-209ENST00000564317 HHIPL2Q6UWX4 724 aa18.79■□□□□ 0.6
CDH11-209ENST00000564317 MRIQ9BWK5 157 aa18.79■□□□□ 0.6
CDH11-209ENST00000564317 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.79■□□□□ 0.6
CDH11-209ENST00000564317 ADARB2Q9NS39 739 aaKnown RBP18.79■□□□□ 0.6
CDH11-209ENST00000564317 SPDYE2BA6NHP3 402 aa18.78■□□□□ 0.6
CDH11-209ENST00000564317 SPDYE6P0CI01 402 aa18.78■□□□□ 0.6
CDH11-209ENST00000564317 MMP14P50281 582 aa18.78■□□□□ 0.6
CDH11-209ENST00000564317 RBM5P52756 815 aaKnown RBP eCLIP18.78■□□□□ 0.6
CDH11-209ENST00000564317 GSTO1P78417 241 aa18.78■□□□□ 0.6
CDH11-209ENST00000564317 BMP2KLQ5H9B9 411 aa18.78■□□□□ 0.6
CDH11-209ENST00000564317 APOBEC3HQ6NTF7 200 aaKnown RBP18.78■□□□□ 0.6
CDH11-209ENST00000564317 MTMR14Q8NCE2 650 aa18.78■□□□□ 0.6
CDH11-209ENST00000564317 FAM163AQ96GL9 167 aaPredicted RBP18.78■□□□□ 0.6
CDH11-209ENST00000564317 PRMT6Q96LA8 375 aaPredicted RBP18.78■□□□□ 0.6
CDH11-209ENST00000564317 ZDHHC15Q96MV8 337 aa18.78■□□□□ 0.6
CDH11-209ENST00000564317 RFX7Q2KHR2 1363 aa18.78■□□□□ 0.6
CDH11-209ENST00000564317 ASTN2O75129 1339 aaPredicted RBP18.77■□□□□ 0.6
CDH11-209ENST00000564317 RNF113AO15541 343 aaKnown RBP18.77■□□□□ 0.6
CDH11-209ENST00000564317 DLGAP5Q15398 846 aa18.77■□□□□ 0.6
CDH11-209ENST00000564317 NBPF9Q3BBW0 867 aa18.77■□□□□ 0.6
CDH11-209ENST00000564317 MYH7P12883 1935 aa18.76■□□□□ 0.59
CDH11-209ENST00000564317 MYH2Q9UKX2 1941 aa18.76■□□□□ 0.59
CDH11-209ENST00000564317 GPR75-ASB3A0A0A6YYF3 556 aa18.76■□□□□ 0.59
CDH11-209ENST00000564317 WNT10BO00744 389 aa18.76■□□□□ 0.59
CDH11-209ENST00000564317 LDHCP07864 332 aa18.76■□□□□ 0.59
CDH11-209ENST00000564317 VEGFAP15692 232 aaPredicted RBP18.76■□□□□ 0.59
CDH11-209ENST00000564317 BTDP43251 543 aa18.76■□□□□ 0.59
CDH11-209ENST00000564317 UBE3CQ15386 1083 aa18.76■□□□□ 0.59
CDH11-209ENST00000564317 SLF2Q8IX21 1173 aa18.76■□□□□ 0.59
CDH11-209ENST00000564317 MIGA1Q8NAN2 632 aa18.76■□□□□ 0.59
CDH11-209ENST00000564317 POTEIP0CG38 1075 aa18.75■□□□□ 0.59
CDH11-209ENST00000564317 POTEJP0CG39 1038 aa18.75■□□□□ 0.59
CDH11-209ENST00000564317 DYNLL1P63167 89 aaKnown RBP18.75■□□□□ 0.59
CDH11-209ENST00000564317 ZSCAN25Q6NSZ9 544 aa18.75■□□□□ 0.59
CDH11-209ENST00000564317 USP50Q70EL3 339 aaPredicted RBP18.75■□□□□ 0.59
CDH11-209ENST00000564317 GPBP1L1Q9HC44 474 aaPredicted RBP18.75■□□□□ 0.59
CDH11-209ENST00000564317 ZFYP08048 801 aaPredicted RBP18.74■□□□□ 0.59
CDH11-209ENST00000564317 EAPPQ56P03 285 aaPredicted RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms