RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 JAG2Q9Y219 1238 aa20.37■□□□□ 0.85
RNF40-206ENST00000564260 MAP4K4O95819 1239 aaPredicted RBP20.36■□□□□ 0.85
RNF40-206ENST00000564260 C1QTNF8P60827 252 aa20.36■□□□□ 0.85
RNF40-206ENST00000564260 GSTO1P78417 241 aa20.36■□□□□ 0.85
RNF40-206ENST00000564260 CFAP100Q494V2 611 aa20.36■□□□□ 0.85
RNF40-206ENST00000564260 ERICH6Q7L0X2 663 aa20.36■□□□□ 0.85
RNF40-206ENST00000564260 CDC37L1Q7L3B6 337 aa20.36■□□□□ 0.85
RNF40-206ENST00000564260 DCPSQ96C86 337 aaKnown RBP20.36■□□□□ 0.85
RNF40-206ENST00000564260 ECHDC1Q9NTX5 307 aa20.36■□□□□ 0.85
RNF40-206ENST00000564260 SHTN1A0MZ66 631 aa20.35■□□□□ 0.85
RNF40-206ENST00000564260 CRKP46108 304 aa20.35■□□□□ 0.85
RNF40-206ENST00000564260 IRX6P78412 446 aaPredicted RBP20.35■□□□□ 0.85
RNF40-206ENST00000564260 SCARF1Q14162 830 aa20.35■□□□□ 0.85
RNF40-206ENST00000564260 APOBEC3FQ8IUX4 373 aaKnown RBP20.35■□□□□ 0.85
RNF40-206ENST00000564260 F8W031 263 aaPredicted RBP20.34■□□□□ 0.85
RNF40-206ENST00000564260 ERC2O15083 957 aa20.34■□□□□ 0.85
RNF40-206ENST00000564260 EGFRP00533 1210 aa20.34■□□□□ 0.85
RNF40-206ENST00000564260 LDHCP07864 332 aa20.34■□□□□ 0.85
RNF40-206ENST00000564260 POTEIP0CG38 1075 aa20.34■□□□□ 0.85
RNF40-206ENST00000564260 POTEJP0CG39 1038 aa20.34■□□□□ 0.85
RNF40-206ENST00000564260 PRDX5P30044 214 aa20.34■□□□□ 0.85
RNF40-206ENST00000564260 ANKRD45Q5TZF3 282 aa20.34■□□□□ 0.85
RNF40-206ENST00000564260 DZIP1Q86YF9 867 aaKnown RBP20.34■□□□□ 0.85
RNF40-206ENST00000564260 CERS3Q8IU89 383 aa20.34■□□□□ 0.85
RNF40-206ENST00000564260 CNTROBQ8N137 903 aa20.34■□□□□ 0.85
RNF40-206ENST00000564260 ABCF2Q9UG63 623 aa20.34■□□□□ 0.85
RNF40-206ENST00000564260 PPP2R3BQ9Y5P8 575 aa20.34■□□□□ 0.85
RNF40-206ENST00000564260 IGHDP01880 384 aa20.33■□□□□ 0.85
RNF40-206ENST00000564260 CYP2E1P05181 493 aaPredicted RBP20.33■□□□□ 0.85
RNF40-206ENST00000564260 TNFAIP1Q13829 316 aa20.33■□□□□ 0.85
RNF40-206ENST00000564260 RBM26Q5T8P6 1007 aaKnown RBP20.33■□□□□ 0.85
RNF40-206ENST00000564260 FKBP1CQ5VVH2 108 aa20.33■□□□□ 0.85
RNF40-206ENST00000564260 SULF1Q8IWU6 871 aa20.33■□□□□ 0.85
RNF40-206ENST00000564260 LRP2BPQ9P2M1 347 aa20.33■□□□□ 0.85
RNF40-206ENST00000564260 GAKO14976 1311 aa20.32■□□□□ 0.84
RNF40-206ENST00000564260 SMARCA5O60264 1052 aaPredicted RBP20.32■□□□□ 0.84
RNF40-206ENST00000564260 ITGBL1O95965 494 aaPredicted RBP20.32■□□□□ 0.84
RNF40-206ENST00000564260 RBM5P52756 815 aaKnown RBP eCLIP20.32■□□□□ 0.84
RNF40-206ENST00000564260 NUCB1Q02818 461 aa20.32■□□□□ 0.84
RNF40-206ENST00000564260 TICAM2Q86XR7 235 aa20.32■□□□□ 0.84
RNF40-206ENST00000564260 HAUS7Q99871 368 aa20.32■□□□□ 0.84
RNF40-206ENST00000564260 GGA3Q9NZ52 723 aa20.32■□□□□ 0.84
RNF40-206ENST00000564260 PASKQ96RG2 1323 aa20.31■□□□□ 0.84
RNF40-206ENST00000564260 GLRX3O76003 335 aaKnown RBP20.31■□□□□ 0.84
RNF40-206ENST00000564260 ZAP70P43403 619 aa20.31■□□□□ 0.84
RNF40-206ENST00000564260 GRIK5Q16478 980 aa20.31■□□□□ 0.84
RNF40-206ENST00000564260 NBPF9Q3BBW0 867 aa20.31■□□□□ 0.84
RNF40-206ENST00000564260 ANGEL2Q5VTE6 544 aaKnown RBP20.31■□□□□ 0.84
RNF40-206ENST00000564260 MAP1SQ66K74 1059 aaPredicted RBP20.31■□□□□ 0.84
RNF40-206ENST00000564260 PI16Q6UXB8 463 aa20.31■□□□□ 0.84
RNF40-206ENST00000564260 NSUN4Q96CB9 384 aaKnown RBP20.31■□□□□ 0.84
RNF40-206ENST00000564260 AOX1Q06278 1338 aa20.3■□□□□ 0.84
RNF40-206ENST00000564260 SALL3Q9BXA9 1300 aa20.3■□□□□ 0.84
RNF40-206ENST00000564260 MX1P20591 662 aa20.3■□□□□ 0.84
RNF40-206ENST00000564260 MAP3K12Q12852 859 aa20.3■□□□□ 0.84
RNF40-206ENST00000564260 SPDYE2Q495Y8 402 aa20.3■□□□□ 0.84
RNF40-206ENST00000564260 KRT26Q7Z3Y9 468 aa20.3■□□□□ 0.84
RNF40-206ENST00000564260 CHD1LQ86WJ1 897 aa20.3■□□□□ 0.84
RNF40-206ENST00000564260 PRMT6Q96LA8 375 aaPredicted RBP20.3■□□□□ 0.84
RNF40-206ENST00000564260 TMOD2Q9NZR1 351 aa20.3■□□□□ 0.84
RNF40-206ENST00000564260 STAP2Q9UGK3 403 aa20.3■□□□□ 0.84
RNF40-206ENST00000564260 MROH7-TTC4A0A0A0MT08 1334 aa20.29■□□□□ 0.84
RNF40-206ENST00000564260 AKAP11Q9UKA4 1901 aa20.29■□□□□ 0.84
RNF40-206ENST00000564260 MECOMQ03112 1051 aa20.29■□□□□ 0.84
RNF40-206ENST00000564260 APOBEC3HQ6NTF7 200 aaKnown RBP20.29■□□□□ 0.84
RNF40-206ENST00000564260 RAI14Q9P0K7 980 aa20.29■□□□□ 0.84
RNF40-206ENST00000564260 TNNI2P48788 182 aa20.28■□□□□ 0.84
RNF40-206ENST00000564260 LRRFIP1Q32MZ4 808 aaKnown RBP20.28■□□□□ 0.84
RNF40-206ENST00000564260 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.28■□□□□ 0.84
RNF40-206ENST00000564260 SNRKQ9NRH2 765 aa20.28■□□□□ 0.84
RNF40-206ENST00000564260 PAG1Q9NWQ8 432 aa20.28■□□□□ 0.84
RNF40-206ENST00000564260 DAGLAQ9Y4D2 1042 aa20.28■□□□□ 0.84
RNF40-206ENST00000564260 MAST2Q6P0Q8 1798 aa20.27■□□□□ 0.84
RNF40-206ENST00000564260 GPR75-ASB3A0A0A6YYF3 556 aa20.27■□□□□ 0.84
RNF40-206ENST00000564260 NPM3O75607 178 aaKnown RBP20.27■□□□□ 0.84
RNF40-206ENST00000564260 PLCG2P16885 1265 aa20.27■□□□□ 0.84
RNF40-206ENST00000564260 APLP1P51693 650 aa20.27■□□□□ 0.84
RNF40-206ENST00000564260 NAA16Q6N069 864 aaPredicted RBP20.27■□□□□ 0.84
RNF40-206ENST00000564260 TBC1D9Q6ZT07 1266 aa20.27■□□□□ 0.84
RNF40-206ENST00000564260 FAM83AQ86UY5 434 aa20.27■□□□□ 0.84
RNF40-206ENST00000564260 NOL10Q9BSC4 688 aaKnown RBP20.27■□□□□ 0.84
RNF40-206ENST00000564260 OSBPL3Q9H4L5 887 aa20.27■□□□□ 0.84
RNF40-206ENST00000564260 BAG3O95817 575 aa20.26■□□□□ 0.83
RNF40-206ENST00000564260 HSPA6P17066 643 aa20.26■□□□□ 0.83
RNF40-206ENST00000564260 DIXDC1Q155Q3 683 aa20.26■□□□□ 0.83
RNF40-206ENST00000564260 ZSCAN25Q6NSZ9 544 aa20.26■□□□□ 0.83
RNF40-206ENST00000564260 CENPQQ7L2Z9 268 aaPredicted RBP20.26■□□□□ 0.83
RNF40-206ENST00000564260 BOLA2Q9H3K6 86 aa20.26■□□□□ 0.83
RNF40-206ENST00000564260 ZNF70Q9UC06 446 aaPredicted RBP20.26■□□□□ 0.83
RNF40-206ENST00000564260 ECM29Q5VYK3 1845 aa20.25■□□□□ 0.83
RNF40-206ENST00000564260 IDH1O75874 414 aaKnown RBP20.25■□□□□ 0.83
RNF40-206ENST00000564260 PPP4CP60510 307 aa20.25■□□□□ 0.83
RNF40-206ENST00000564260 FKBP1BP68106 108 aa20.25■□□□□ 0.83
RNF40-206ENST00000564260 PI4K2BQ8TCG2 481 aa20.25■□□□□ 0.83
RNF40-206ENST00000564260 DNAJC2Q99543 621 aaKnown RBP20.25■□□□□ 0.83
RNF40-206ENST00000564260 LNPKQ9C0E8 428 aa20.25■□□□□ 0.83
RNF40-206ENST00000564260 PIH1D3Q9NQM4 214 aaKnown RBP20.25■□□□□ 0.83
RNF40-206ENST00000564260 RPAP1Q9BWH6 1393 aaPredicted RBP20.24■□□□□ 0.83
RNF40-206ENST00000564260 GOLIM4O00461 696 aa20.24■□□□□ 0.83
RNF40-206ENST00000564260 PDE1AP54750 535 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms