RNA–Protein interactions for RNA: ENST00000564131.1

RRN3-206, Transcript of RRN3 homolog, RNA polymerase I transcription factor, humanhuman

TSL 1 (best) BASIC

Gene RRN3, Length 1,001 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRN3-206ENST00000564131 TAF7LQ5H9L4 462 aa13.7□□□□□ -0.22
RRN3-206ENST00000564131 ZNF594Q96JF6 807 aaPredicted RBP13.7□□□□□ -0.22
RRN3-206ENST00000564131 ZCCHC17Q9NP64 241 aaKnown RBP13.7□□□□□ -0.22
RRN3-206ENST00000564131 MROH5Q6ZUA9 1318 aa13.69□□□□□ -0.22
RRN3-206ENST00000564131 HABP4Q5JVS0 413 aaKnown RBP13.69□□□□□ -0.22
RRN3-206ENST00000564131 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.69□□□□□ -0.22
RRN3-206ENST00000564131 BRI3BPQ8WY22 251 aa13.69□□□□□ -0.22
RRN3-206ENST00000564131 ZNF333Q96JL9 665 aa13.69□□□□□ -0.22
RRN3-206ENST00000564131 TDRD3Q9H7E2 651 aaKnown RBP13.69□□□□□ -0.22
RRN3-206ENST00000564131 ZFYVE28Q9HCC9 887 aa13.69□□□□□ -0.22
RRN3-206ENST00000564131 C9orf78Q9NZ63 289 aaPredicted RBP13.69□□□□□ -0.22
RRN3-206ENST00000564131 JAG2Q9Y219 1238 aa13.69□□□□□ -0.22
RRN3-206ENST00000564131 RIPOR2Q9Y4F9 1068 aa13.69□□□□□ -0.22
RRN3-206ENST00000564131 UTYO14607 1347 aa13.68□□□□□ -0.22
RRN3-206ENST00000564131 PLIN1O60240 522 aa13.68□□□□□ -0.22
RRN3-206ENST00000564131 CRKP46108 304 aa13.68□□□□□ -0.22
RRN3-206ENST00000564131 GYG1P46976 350 aa13.68□□□□□ -0.22
RRN3-206ENST00000564131 CAP1Q01518 475 aa13.68□□□□□ -0.22
RRN3-206ENST00000564131 FKBP1CQ5VVH2 108 aa13.68□□□□□ -0.22
RRN3-206ENST00000564131 FBXO33Q7Z6M2 555 aa13.68□□□□□ -0.22
RRN3-206ENST00000564131 NBPF11Q86T75 865 aa13.68□□□□□ -0.22
RRN3-206ENST00000564131 TBC1D22AQ8WUA7 517 aa13.68□□□□□ -0.22
RRN3-206ENST00000564131 ELP3Q9H9T3 547 aa13.68□□□□□ -0.22
RRN3-206ENST00000564131 SUGT1Q9Y2Z0 365 aa13.68□□□□□ -0.22
RRN3-206ENST00000564131 SPDYE5A6NIY4 337 aa13.67□□□□□ -0.22
RRN3-206ENST00000564131 GNRH1P01148 92 aa13.67□□□□□ -0.22
RRN3-206ENST00000564131 VGLL4Q14135 290 aa13.67□□□□□ -0.22
RRN3-206ENST00000564131 FAM83AQ86UY5 434 aa13.67□□□□□ -0.22
RRN3-206ENST00000564131 HOOK2Q96ED9 719 aa13.67□□□□□ -0.22
RRN3-206ENST00000564131 KAZALD1Q96I82 304 aa13.67□□□□□ -0.22
RRN3-206ENST00000564131 TMEM106CQ9BVX2 250 aa13.67□□□□□ -0.22
RRN3-206ENST00000564131 SRCIN1Q9C0H9 1055 aa13.67□□□□□ -0.22
RRN3-206ENST00000564131 CSADQ9Y600 493 aa13.67□□□□□ -0.22
RRN3-206ENST00000564131 TRIOBPQ9H2D6 2365 aa13.67□□□□□ -0.22
RRN3-206ENST00000564131 CCL15-CCL14A0A0B4J2E2 113 aa13.66□□□□□ -0.22
RRN3-206ENST00000564131 WDHD1O75717 1129 aaPredicted RBP13.66□□□□□ -0.22
RRN3-206ENST00000564131 EN2P19622 333 aaPredicted RBP13.66□□□□□ -0.22
RRN3-206ENST00000564131 TAF1CQ15572 869 aaPredicted RBP13.66□□□□□ -0.22
RRN3-206ENST00000564131 CCL15Q16663 113 aa13.66□□□□□ -0.22
RRN3-206ENST00000564131 RABL6Q3YEC7 729 aaPredicted RBP13.66□□□□□ -0.22
RRN3-206ENST00000564131 ERO1BQ86YB8 467 aa13.66□□□□□ -0.22
RRN3-206ENST00000564131 CDAN1Q8IWY9 1227 aa13.66□□□□□ -0.22
RRN3-206ENST00000564131 TMEM39BQ9GZU3 492 aa13.66□□□□□ -0.22
RRN3-206ENST00000564131 RANBP2P49792 3224 aaKnown RBP13.66□□□□□ -0.22
RRN3-206ENST00000564131 KIF16BQ96L93 1317 aa13.65□□□□□ -0.22
RRN3-206ENST00000564131 TCP10L2B9ZVM9 353 aa13.65□□□□□ -0.22
RRN3-206ENST00000564131 TLR2O60603 784 aa13.65□□□□□ -0.22
RRN3-206ENST00000564131 CETPP11597 493 aa13.65□□□□□ -0.22
RRN3-206ENST00000564131 PRMT2P55345 433 aa13.65□□□□□ -0.22
RRN3-206ENST00000564131 FAM43AQ8N2R8 423 aa13.65□□□□□ -0.22
RRN3-206ENST00000564131 TEKT1Q969V4 418 aa13.65□□□□□ -0.22
RRN3-206ENST00000564131 ZDHHC15Q96MV8 337 aa13.65□□□□□ -0.22
RRN3-206ENST00000564131 PUS3Q9BZE2 481 aaKnown RBP13.65□□□□□ -0.22
RRN3-206ENST00000564131 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.65□□□□□ -0.22
RRN3-206ENST00000564131 RPAP1Q9BWH6 1393 aaPredicted RBP13.64□□□□□ -0.23
RRN3-206ENST00000564131 SLC9C1Q4G0N8 1177 aa13.64□□□□□ -0.23
RRN3-206ENST00000564131 CAVIN4Q5BKX8 364 aa13.64□□□□□ -0.23
RRN3-206ENST00000564131 VPS37DQ86XT2 251 aa13.64□□□□□ -0.23
RRN3-206ENST00000564131 VGLL2Q8N8G2 317 aa13.64□□□□□ -0.23
RRN3-206ENST00000564131 CNKSR2Q8WXI2 1034 aa13.64□□□□□ -0.23
RRN3-206ENST00000564131 SUCLG2Q96I99 432 aa13.64□□□□□ -0.23
RRN3-206ENST00000564131 SPINK5Q9NQ38 1064 aaPredicted RBP13.64□□□□□ -0.23
RRN3-206ENST00000564131 SZT2Q5T011 3432 aa13.64□□□□□ -0.23
RRN3-206ENST00000564131 PDE8BO95263 885 aa13.63□□□□□ -0.23
RRN3-206ENST00000564131 NBPF7P0C2Y1 421 aaPredicted RBP13.63□□□□□ -0.23
RRN3-206ENST00000564131 LACTBP83111 547 aaPredicted RBP13.63□□□□□ -0.23
RRN3-206ENST00000564131 PPIL2Q13356 520 aa13.63□□□□□ -0.23
RRN3-206ENST00000564131 SNAPC2Q13487 334 aa13.63□□□□□ -0.23
RRN3-206ENST00000564131 GRIK5Q16478 980 aa13.63□□□□□ -0.23
RRN3-206ENST00000564131 APOBEC3HQ6NTF7 200 aaKnown RBP13.63□□□□□ -0.23
RRN3-206ENST00000564131 HHIPL2Q6UWX4 724 aa13.63□□□□□ -0.23
RRN3-206ENST00000564131 OTUD5Q96G74 571 aa13.63□□□□□ -0.23
RRN3-206ENST00000564131 MRS2Q9HD23 443 aa13.63□□□□□ -0.23
RRN3-206ENST00000564131 PTCH2Q9Y6C5 1203 aa13.63□□□□□ -0.23
RRN3-206ENST00000564131 SNCAIPQ9Y6H5 919 aa13.63□□□□□ -0.23
RRN3-206ENST00000564131 MAST3O60307 1309 aa13.63□□□□□ -0.23
RRN3-206ENST00000564131 DCAF15Q66K64 600 aa13.62□□□□□ -0.23
RRN3-206ENST00000564131 TMOD2Q9NZR1 351 aa13.62□□□□□ -0.23
RRN3-206ENST00000564131 BTBD19C9JJ37 291 aa13.61□□□□□ -0.23
RRN3-206ENST00000564131 IRF6O14896 467 aa13.61□□□□□ -0.23
RRN3-206ENST00000564131 FXR1P51114 621 aaKnown RBP eCLIP13.61□□□□□ -0.23
RRN3-206ENST00000564131 PPATQ06203 517 aa13.61□□□□□ -0.23
RRN3-206ENST00000564131 KIF22Q14807 665 aa13.61□□□□□ -0.23
RRN3-206ENST00000564131 SLC4A10Q6U841 1118 aa13.61□□□□□ -0.23
RRN3-206ENST00000564131 C17orf99Q6UX52 265 aa13.61□□□□□ -0.23
RRN3-206ENST00000564131 WRNIP1Q96S55 665 aa13.61□□□□□ -0.23
RRN3-206ENST00000564131 BICC1Q9H694 974 aaKnown RBP13.61□□□□□ -0.23
RRN3-206ENST00000564131 ZBTB22O15209 634 aa13.6□□□□□ -0.23
RRN3-206ENST00000564131 FRAT2O75474 233 aaPredicted RBP13.6□□□□□ -0.23
RRN3-206ENST00000564131 FGFR2P21802 821 aa13.6□□□□□ -0.23
RRN3-206ENST00000564131 LRRC24Q50LG9 513 aa13.6□□□□□ -0.23
RRN3-206ENST00000564131 METTL24Q5JXM2 366 aa13.6□□□□□ -0.23
RRN3-206ENST00000564131 ANKRD44Q8N8A2 993 aa13.6□□□□□ -0.23
RRN3-206ENST00000564131 ZNF341Q9BYN7 854 aa13.6□□□□□ -0.23
RRN3-206ENST00000564131 ZNF112Q9UJU3 913 aa13.6□□□□□ -0.23
RRN3-206ENST00000564131 BCAMP50895 628 aa13.59□□□□□ -0.23
RRN3-206ENST00000564131 CACNB3P54284 484 aa13.59□□□□□ -0.23
RRN3-206ENST00000564131 CHAF1AQ13111 956 aaPredicted RBP13.59□□□□□ -0.23
RRN3-206ENST00000564131 PUM3Q15397 648 aaKnown RBP13.59□□□□□ -0.23
RRN3-206ENST00000564131 SLC4A8Q2Y0W8 1093 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms