RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 JAG2Q9Y219 1238 aa20.43■□□□□ 0.86
RNF40-205ENST00000563909 UBXN2AP68543 259 aa20.42■□□□□ 0.86
RNF40-205ENST00000563909 C17orf99Q6UX52 265 aa20.42■□□□□ 0.86
RNF40-205ENST00000563909 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.42■□□□□ 0.86
RNF40-205ENST00000563909 MPHOSPH8Q99549 860 aa20.42■□□□□ 0.86
RNF40-205ENST00000563909 ZNF70Q9UC06 446 aaPredicted RBP20.42■□□□□ 0.86
RNF40-205ENST00000563909 CPA4Q9UI42 421 aa20.42■□□□□ 0.86
RNF40-205ENST00000563909 SPDYE5A6NIY4 337 aa20.41■□□□□ 0.86
RNF40-205ENST00000563909 SNAP23O00161 211 aa20.41■□□□□ 0.86
RNF40-205ENST00000563909 SNAPC2Q13487 334 aa20.41■□□□□ 0.86
RNF40-205ENST00000563909 SPDYE2Q495Y8 402 aa20.41■□□□□ 0.86
RNF40-205ENST00000563909 TMEM39BQ9GZU3 492 aa20.41■□□□□ 0.86
RNF40-205ENST00000563909 TDRD3Q9H7E2 651 aaKnown RBP20.41■□□□□ 0.86
RNF40-205ENST00000563909 TRIM35Q9UPQ4 493 aa20.41■□□□□ 0.86
RNF40-205ENST00000563909 MYPNQ86TC9 1320 aa20.41■□□□□ 0.86
RNF40-205ENST00000563909 SGPL1O95470 568 aa20.4■□□□□ 0.86
RNF40-205ENST00000563909 DDX58O95786 925 aaKnown RBP20.4■□□□□ 0.86
RNF40-205ENST00000563909 FKBP1AP62942 108 aaKnown RBP20.4■□□□□ 0.86
RNF40-205ENST00000563909 CHRNDQ07001 517 aa20.4■□□□□ 0.86
RNF40-205ENST00000563909 DIEXFQ68CQ4 756 aaKnown RBP20.4■□□□□ 0.86
RNF40-205ENST00000563909 UNC93B1Q9H1C4 597 aa20.4■□□□□ 0.86
RNF40-205ENST00000563909 MAP3K2Q9Y2U5 619 aa20.4■□□□□ 0.86
RNF40-205ENST00000563909 VCANP13611 3396 aa20.39■□□□□ 0.86
RNF40-205ENST00000563909 TCP10L2B9ZVM9 353 aa20.39■□□□□ 0.85
RNF40-205ENST00000563909 IRF6O14896 467 aa20.39■□□□□ 0.85
RNF40-205ENST00000563909 IGKV5-2P06315 115 aa20.39■□□□□ 0.85
RNF40-205ENST00000563909 IL1R1P14778 569 aa20.39■□□□□ 0.85
RNF40-205ENST00000563909 ERO1BQ86YB8 467 aa20.39■□□□□ 0.85
RNF40-205ENST00000563909 IRS2Q9Y4H2 1338 aa20.38■□□□□ 0.85
RNF40-205ENST00000563909 ELL2O00472 640 aaPredicted RBP20.38■□□□□ 0.85
RNF40-205ENST00000563909 TFRCP02786 760 aaKnown RBP20.38■□□□□ 0.85
RNF40-205ENST00000563909 ITGA6P23229 1130 aa20.38■□□□□ 0.85
RNF40-205ENST00000563909 ZNF804AQ7Z570 1209 aa20.38■□□□□ 0.85
RNF40-205ENST00000563909 CCDC146Q8IYE0 955 aa20.38■□□□□ 0.85
RNF40-205ENST00000563909 MTMR10Q9NXD2 777 aa20.38■□□□□ 0.85
RNF40-205ENST00000563909 SNCAIPQ9Y6H5 919 aa20.38■□□□□ 0.85
RNF40-205ENST00000563909 TAF5LO75529 589 aa20.37■□□□□ 0.85
RNF40-205ENST00000563909 BMP8BP34820 402 aa20.37■□□□□ 0.85
RNF40-205ENST00000563909 ZKSCAN4Q969J2 545 aaPredicted RBP20.37■□□□□ 0.85
RNF40-205ENST00000563909 GDF15Q99988 308 aa20.37■□□□□ 0.85
RNF40-205ENST00000563909 MBIPQ9NS73 344 aa20.37■□□□□ 0.85
RNF40-205ENST00000563909 MYH3P11055 1940 aa20.36■□□□□ 0.85
RNF40-205ENST00000563909 TNNI2P48788 182 aa20.36■□□□□ 0.85
RNF40-205ENST00000563909 PRKCZQ05513 592 aa20.36■□□□□ 0.85
RNF40-205ENST00000563909 C15orf52Q6ZUT6 534 aaKnown RBP20.36■□□□□ 0.85
RNF40-205ENST00000563909 UBE3BQ7Z3V4 1068 aa20.36■□□□□ 0.85
RNF40-205ENST00000563909 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.36■□□□□ 0.85
RNF40-205ENST00000563909 SERPINA10Q9UK55 444 aa20.36■□□□□ 0.85
RNF40-205ENST00000563909 PPIL2Q13356 520 aa20.35■□□□□ 0.85
RNF40-205ENST00000563909 CWF19L2Q2TBE0 894 aaKnown RBP20.35■□□□□ 0.85
RNF40-205ENST00000563909 DZIP1LQ8IYY4 767 aaKnown RBP20.35■□□□□ 0.85
RNF40-205ENST00000563909 SLAIN1Q8ND83 568 aa20.35■□□□□ 0.85
RNF40-205ENST00000563909 TTF2Q9UNY4 1162 aaKnown RBP20.35■□□□□ 0.85
RNF40-205ENST00000563909 PDHXO00330 501 aa20.34■□□□□ 0.85
RNF40-205ENST00000563909 DEFB118Q96PH6 123 aa20.34■□□□□ 0.85
RNF40-205ENST00000563909 WRNIP1Q96S55 665 aa20.34■□□□□ 0.85
RNF40-205ENST00000563909 PI4KAP2A4QPH2 592 aa20.33■□□□□ 0.85
RNF40-205ENST00000563909 H7C1W4 665 aa20.33■□□□□ 0.85
RNF40-205ENST00000563909 BCAMP50895 628 aa20.33■□□□□ 0.85
RNF40-205ENST00000563909 NEXNQ0ZGT2 675 aa20.33■□□□□ 0.85
RNF40-205ENST00000563909 LRIT3Q3SXY7 679 aa20.33■□□□□ 0.85
RNF40-205ENST00000563909 KSR2Q6VAB6 950 aa20.33■□□□□ 0.85
RNF40-205ENST00000563909 ANKRD23Q86SG2 305 aa20.33■□□□□ 0.85
RNF40-205ENST00000563909 PI4KAP1Q8N8J0 262 aa20.33■□□□□ 0.85
RNF40-205ENST00000563909 PAWRQ96IZ0 340 aaKnown RBP20.33■□□□□ 0.85
RNF40-205ENST00000563909 SPTBN5Q9NRC6 3674 aaKnown RBP20.33■□□□□ 0.84
RNF40-205ENST00000563909 FCGRTP55899 365 aa20.32■□□□□ 0.84
RNF40-205ENST00000563909 C7orf61Q8IZ16 206 aa20.32■□□□□ 0.84
RNF40-205ENST00000563909 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.32■□□□□ 0.84
RNF40-205ENST00000563909 RUNDC1Q96C34 613 aa20.32■□□□□ 0.84
RNF40-205ENST00000563909 ZMYND8Q9ULU4 1186 aaPredicted RBP20.32■□□□□ 0.84
RNF40-205ENST00000563909 GABRQQ9UN88 632 aa20.32■□□□□ 0.84
RNF40-205ENST00000563909 ADGRA2Q96PE1 1338 aa20.31■□□□□ 0.84
RNF40-205ENST00000563909 NEURL1BA8MQ27 555 aa20.31■□□□□ 0.84
RNF40-205ENST00000563909 ADCY3O60266 1144 aa20.31■□□□□ 0.84
RNF40-205ENST00000563909 MFSD14BQ5SR56 506 aa20.31■□□□□ 0.84
RNF40-205ENST00000563909 CSF1RP07333 972 aa20.3■□□□□ 0.84
RNF40-205ENST00000563909 ELNP15502 786 aa20.3■□□□□ 0.84
RNF40-205ENST00000563909 CAPN2P17655 700 aa20.3■□□□□ 0.84
RNF40-205ENST00000563909 PPATQ06203 517 aa20.3■□□□□ 0.84
RNF40-205ENST00000563909 NECAB2Q7Z6G3 386 aa20.3■□□□□ 0.84
RNF40-205ENST00000563909 FAM205AQ6ZU69 1335 aa20.29■□□□□ 0.84
RNF40-205ENST00000563909 ANKRD18BA2A2Z9 1011 aa20.29■□□□□ 0.84
RNF40-205ENST00000563909 INHAP05111 366 aa20.29■□□□□ 0.84
RNF40-205ENST00000563909 CRKP46108 304 aa20.29■□□□□ 0.84
RNF40-205ENST00000563909 CACNB3P54284 484 aa20.29■□□□□ 0.84
RNF40-205ENST00000563909 TDHQ8IZJ6 230 aa20.29■□□□□ 0.84
RNF40-205ENST00000563909 PLA2G12BQ9BX93 195 aa20.29■□□□□ 0.84
RNF40-205ENST00000563909 LAMA2P24043 3122 aaKnown RBP20.29■□□□□ 0.84
RNF40-205ENST00000563909 ARAP2Q8WZ64 1704 aa20.29■□□□□ 0.84
RNF40-205ENST00000563909 WDR43Q15061 677 aaKnown RBP eCLIP20.28■□□□□ 0.84
RNF40-205ENST00000563909 CCDC30Q5VVM6 783 aa20.28■□□□□ 0.84
RNF40-205ENST00000563909 DIS3LQ8TF46 1054 aaKnown RBP20.28■□□□□ 0.84
RNF40-205ENST00000563909 SYN1P17600 705 aa20.27■□□□□ 0.84
RNF40-205ENST00000563909 MAGEA10P43363 369 aaPredicted RBP20.27■□□□□ 0.84
RNF40-205ENST00000563909 FLT3LGP49771 235 aa20.27■□□□□ 0.84
RNF40-205ENST00000563909 C8orf58Q8NAV2 365 aa20.27■□□□□ 0.84
RNF40-205ENST00000563909 HOOK2Q96ED9 719 aa20.27■□□□□ 0.84
RNF40-205ENST00000563909 CRISPLD2Q9H0B8 497 aa20.27■□□□□ 0.84
RNF40-205ENST00000563909 MRS2Q9HD23 443 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms