RNA–Protein interactions for RNA: ENST00000563835.1

PTPN9-203, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 338 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-203ENST00000563835 FKBP1BP68106 108 aa11.48□□□□□ -0.57
PTPN9-203ENST00000563835 MKRN3Q13064 507 aaKnown RBP11.48□□□□□ -0.57
PTPN9-203ENST00000563835 MTX1Q13505 466 aa11.48□□□□□ -0.57
PTPN9-203ENST00000563835 SPDYE2Q495Y8 402 aa11.48□□□□□ -0.57
PTPN9-203ENST00000563835 BEGAINQ9BUH8 593 aa11.48□□□□□ -0.57
PTPN9-203ENST00000563835 PRDM10Q9NQV6 1147 aa11.48□□□□□ -0.57
PTPN9-203ENST00000563835 MYH2Q9UKX2 1941 aa11.48□□□□□ -0.57
PTPN9-203ENST00000563835 MYO1BO43795 1136 aa11.47□□□□□ -0.57
PTPN9-203ENST00000563835 GNAI2P04899 355 aa11.47□□□□□ -0.57
PTPN9-203ENST00000563835 CACNB3P54284 484 aa11.47□□□□□ -0.57
PTPN9-203ENST00000563835 TFCP2Q12800 502 aa11.47□□□□□ -0.57
PTPN9-203ENST00000563835 DZIP1LQ8IYY4 767 aaKnown RBP11.47□□□□□ -0.57
PTPN9-203ENST00000563835 CCDC102AQ96A19 550 aa11.47□□□□□ -0.57
PTPN9-203ENST00000563835 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.47□□□□□ -0.57
PTPN9-203ENST00000563835 CEP126Q9P2H0 1117 aa11.47□□□□□ -0.57
PTPN9-203ENST00000563835 ZNF70Q9UC06 446 aaPredicted RBP11.47□□□□□ -0.57
PTPN9-203ENST00000563835 SERPINA10Q9UK55 444 aa11.47□□□□□ -0.57
PTPN9-203ENST00000563835 FBXO3Q9UK99 471 aa11.47□□□□□ -0.57
PTPN9-203ENST00000563835 MAST2Q6P0Q8 1798 aa11.46□□□□□ -0.57
PTPN9-203ENST00000563835 TCP10L2B9ZVM9 353 aa11.46□□□□□ -0.57
PTPN9-203ENST00000563835 PRDX5P30044 214 aa11.46□□□□□ -0.57
PTPN9-203ENST00000563835 NF2P35240 595 aa11.46□□□□□ -0.57
PTPN9-203ENST00000563835 RASA3Q14644 834 aa11.46□□□□□ -0.57
PTPN9-203ENST00000563835 NBPF12Q5TAG4 269 aaPredicted RBP11.46□□□□□ -0.57
PTPN9-203ENST00000563835 ITPRIPQ8IWB1 547 aa11.46□□□□□ -0.57
PTPN9-203ENST00000563835 FTSJ3Q8IY81 847 aaKnown RBP11.46□□□□□ -0.57
PTPN9-203ENST00000563835 TBC1D22AQ8WUA7 517 aa11.46□□□□□ -0.57
PTPN9-203ENST00000563835 ANGEL1Q9UNK9 670 aaKnown RBP11.46□□□□□ -0.57
PTPN9-203ENST00000563835 HDAC5Q9UQL6 1122 aa11.46□□□□□ -0.57
PTPN9-203ENST00000563835 DOCK2Q92608 1830 aa11.46□□□□□ -0.58
PTPN9-203ENST00000563835 MYO5AQ9Y4I1 1855 aaKnown RBP11.45□□□□□ -0.58
PTPN9-203ENST00000563835 A0A1B0GUL7 405 aa11.45□□□□□ -0.58
PTPN9-203ENST00000563835 TIMM10P62072 90 aa11.45□□□□□ -0.58
PTPN9-203ENST00000563835 DIXDC1Q155Q3 683 aa11.45□□□□□ -0.58
PTPN9-203ENST00000563835 PANK1Q8TE04 598 aa11.45□□□□□ -0.58
PTPN9-203ENST00000563835 TEKT1Q969V4 418 aa11.45□□□□□ -0.58
PTPN9-203ENST00000563835 CLMNQ96JQ2 1002 aa11.45□□□□□ -0.58
PTPN9-203ENST00000563835 CSRNP1Q96S65 589 aa11.45□□□□□ -0.58
PTPN9-203ENST00000563835 PPP2R3BQ9Y5P8 575 aa11.45□□□□□ -0.58
PTPN9-203ENST00000563835 RASGRF1Q13972 1273 aa11.44□□□□□ -0.58
PTPN9-203ENST00000563835 CCDC102BQ68D86 513 aa11.44□□□□□ -0.58
PTPN9-203ENST00000563835 ARMC9Q7Z3E5 817 aa11.44□□□□□ -0.58
PTPN9-203ENST00000563835 TEPSINQ96N21 525 aa11.44□□□□□ -0.58
PTPN9-203ENST00000563835 TMEM39BQ9GZU3 492 aa11.44□□□□□ -0.58
PTPN9-203ENST00000563835 AK9Q5TCS8 1911 aa11.43□□□□□ -0.58
PTPN9-203ENST00000563835 MAST3O60307 1309 aa11.43□□□□□ -0.58
PTPN9-203ENST00000563835 CA12O43570 354 aa11.43□□□□□ -0.58
PTPN9-203ENST00000563835 TRPA1O75762 1119 aa11.43□□□□□ -0.58
PTPN9-203ENST00000563835 POLA2Q14181 598 aa11.43□□□□□ -0.58
PTPN9-203ENST00000563835 LDLRAD1Q5T700 205 aa11.43□□□□□ -0.58
PTPN9-203ENST00000563835 APOBEC3HQ6NTF7 200 aaKnown RBP11.43□□□□□ -0.58
PTPN9-203ENST00000563835 PI16Q6UXB8 463 aa11.43□□□□□ -0.58
PTPN9-203ENST00000563835 WDR66Q8TBY9 1149 aa11.43□□□□□ -0.58
PTPN9-203ENST00000563835 XAGE2Q96GT9 111 aa11.43□□□□□ -0.58
PTPN9-203ENST00000563835 ZDHHC15Q96MV8 337 aa11.43□□□□□ -0.58
PTPN9-203ENST00000563835 RNF186Q9NXI6 227 aa11.43□□□□□ -0.58
PTPN9-203ENST00000563835 DAGLAQ9Y4D2 1042 aa11.43□□□□□ -0.58
PTPN9-203ENST00000563835 SALL1Q9NSC2 1324 aa11.42□□□□□ -0.58
PTPN9-203ENST00000563835 ZBTB7BO15156 539 aaPredicted RBP11.42□□□□□ -0.58
PTPN9-203ENST00000563835 HDLBPQ00341 1268 aaKnown RBP11.42□□□□□ -0.58
PTPN9-203ENST00000563835 TNFAIP1Q13829 316 aa11.42□□□□□ -0.58
PTPN9-203ENST00000563835 MAP3K11Q16584 847 aa11.42□□□□□ -0.58
PTPN9-203ENST00000563835 DENND2AQ9ULE3 1009 aa11.42□□□□□ -0.58
PTPN9-203ENST00000563835 CDK5RAP2Q96SN8 1893 aa11.42□□□□□ -0.58
PTPN9-203ENST00000563835 USP2O75604 605 aaPredicted RBP11.41□□□□□ -0.58
PTPN9-203ENST00000563835 LDHBP07195 334 aaKnown RBP11.41□□□□□ -0.58
PTPN9-203ENST00000563835 GJA5P36382 358 aa11.41□□□□□ -0.58
PTPN9-203ENST00000563835 HHIPL2Q6UWX4 724 aa11.41□□□□□ -0.58
PTPN9-203ENST00000563835 SSH3Q8TE77 659 aa11.41□□□□□ -0.58
PTPN9-203ENST00000563835 WNK4Q96J92 1243 aa11.41□□□□□ -0.58
PTPN9-203ENST00000563835 NEUROD6Q96NK8 337 aa11.41□□□□□ -0.58
PTPN9-203ENST00000563835 GNL3LQ9NVN8 582 aaKnown RBP11.41□□□□□ -0.58
PTPN9-203ENST00000563835 SAGE1Q9NXZ1 904 aa11.41□□□□□ -0.58
PTPN9-203ENST00000563835 SUGT1Q9Y2Z0 365 aa11.41□□□□□ -0.58
PTPN9-203ENST00000563835 RFX7Q2KHR2 1363 aa11.41□□□□□ -0.58
PTPN9-203ENST00000563835 SEMA3EO15041 775 aa11.4□□□□□ -0.58
PTPN9-203ENST00000563835 PPP1R12BO60237 982 aaPredicted RBP11.4□□□□□ -0.58
PTPN9-203ENST00000563835 ATP8B2P98198 1209 aa11.4□□□□□ -0.58
PTPN9-203ENST00000563835 NFIAQ12857 509 aa11.4□□□□□ -0.58
PTPN9-203ENST00000563835 G3BP1Q13283 466 aaKnown RBP eCLIP11.4□□□□□ -0.58
PTPN9-203ENST00000563835 MVPQ14764 893 aaKnown RBP11.4□□□□□ -0.58
PTPN9-203ENST00000563835 SUPT20HL1Q3ZLR7 823 aa11.4□□□□□ -0.58
PTPN9-203ENST00000563835 SPRYD7Q5W111 196 aa11.4□□□□□ -0.58
PTPN9-203ENST00000563835 CDC42EP5Q6NZY7 148 aa11.4□□□□□ -0.58
PTPN9-203ENST00000563835 CEP85Q6P2H3 762 aa11.4□□□□□ -0.58
PTPN9-203ENST00000563835 CNKSR2Q8WXI2 1034 aa11.4□□□□□ -0.58
PTPN9-203ENST00000563835 ELP3Q9H9T3 547 aa11.4□□□□□ -0.58
PTPN9-203ENST00000563835 TMOD2Q9NZR1 351 aa11.4□□□□□ -0.58
PTPN9-203ENST00000563835 AKAP2Q9Y2D5 859 aa11.4□□□□□ -0.58
PTPN9-203ENST00000563835 RPAP1Q9BWH6 1393 aaPredicted RBP11.4□□□□□ -0.59
PTPN9-203ENST00000563835 FOCADQ5VW36 1801 aa11.39□□□□□ -0.59
PTPN9-203ENST00000563835 PDS5AQ29RF7 1337 aaKnown RBP11.39□□□□□ -0.59
PTPN9-203ENST00000563835 SURF6O75683 361 aaKnown RBP11.39□□□□□ -0.59
PTPN9-203ENST00000563835 MCAMP43121 646 aa11.39□□□□□ -0.59
PTPN9-203ENST00000563835 IREB2P48200 963 aaKnown RBP11.39□□□□□ -0.59
PTPN9-203ENST00000563835 TNNI2P48788 182 aa11.39□□□□□ -0.59
PTPN9-203ENST00000563835 TCP10Q12799 353 aa11.39□□□□□ -0.59
PTPN9-203ENST00000563835 OS9Q13438 667 aaPredicted RBP11.39□□□□□ -0.59
PTPN9-203ENST00000563835 VGLL4Q14135 290 aa11.39□□□□□ -0.59
PTPN9-203ENST00000563835 TNNI3KQ59H18 835 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms