RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 SLC27A2O14975 620 aa26.24■■□□□ 1.79
LINC01960-201ENST00000563759 MBD4O95243 580 aa26.24■■□□□ 1.79
LINC01960-201ENST00000563759 LDHBP07195 334 aaKnown RBP26.24■■□□□ 1.79
LINC01960-201ENST00000563759 MECOMQ03112 1051 aa26.24■■□□□ 1.79
LINC01960-201ENST00000563759 HSCBQ8IWL3 235 aa26.24■■□□□ 1.79
LINC01960-201ENST00000563759 RASEFQ8IZ41 740 aa26.24■■□□□ 1.79
LINC01960-201ENST00000563759 NSUN4Q96CB9 384 aaKnown RBP26.24■■□□□ 1.79
LINC01960-201ENST00000563759 IL17RAQ96F46 866 aa26.24■■□□□ 1.79
LINC01960-201ENST00000563759 DOK7Q18PE1 504 aa26.23■■□□□ 1.79
LINC01960-201ENST00000563759 SCN9AQ15858 1988 aa26.23■■□□□ 1.79
LINC01960-201ENST00000563759 RTKN2Q8IZC4 609 aa26.23■■□□□ 1.79
LINC01960-201ENST00000563759 MIGA1Q8NAN2 632 aa26.23■■□□□ 1.79
LINC01960-201ENST00000563759 TBC1D22AQ8WUA7 517 aa26.23■■□□□ 1.79
LINC01960-201ENST00000563759 TBC1D2Q9BYX2 928 aa26.23■■□□□ 1.79
LINC01960-201ENST00000563759 ST18O60284 1047 aa26.22■■□□□ 1.79
LINC01960-201ENST00000563759 SOGA3Q5TF21 947 aa26.22■■□□□ 1.79
LINC01960-201ENST00000563759 ADGRA1Q86SQ6 560 aa26.22■■□□□ 1.79
LINC01960-201ENST00000563759 KCNB2Q92953 911 aa26.22■■□□□ 1.79
LINC01960-201ENST00000563759 FBXW7Q969H0 707 aa26.22■■□□□ 1.79
LINC01960-201ENST00000563759 ARMT1Q9H993 441 aa26.22■■□□□ 1.79
LINC01960-201ENST00000563759 FER1L6Q2WGJ9 1857 aa26.22■■□□□ 1.79
LINC01960-201ENST00000563759 GTF2IP78347 998 aa26.21■■□□□ 1.79
LINC01960-201ENST00000563759 DALRD3Q5D0E6 543 aaKnown RBP26.21■■□□□ 1.79
LINC01960-201ENST00000563759 MFSD14BQ5SR56 506 aa26.21■■□□□ 1.79
LINC01960-201ENST00000563759 TMED8Q6PL24 325 aaPredicted RBP26.21■■□□□ 1.79
LINC01960-201ENST00000563759 ZNF384Q8TF68 577 aa26.21■■□□□ 1.79
LINC01960-201ENST00000563759 STRBPQ96SI9 672 aaKnown RBP26.21■■□□□ 1.79
LINC01960-201ENST00000563759 SPON1Q9HCB6 807 aa26.21■■□□□ 1.79
LINC01960-201ENST00000563759 FAM205AQ6ZU69 1335 aa26.21■■□□□ 1.79
LINC01960-201ENST00000563759 IGSF3O75054 1194 aa26.21■■□□□ 1.79
LINC01960-201ENST00000563759 SNX21Q969T3 373 aa26.21■■□□□ 1.79
LINC01960-201ENST00000563759 DBNDD1Q9H9R9 158 aa26.21■■□□□ 1.79
LINC01960-201ENST00000563759 MAGEB6P1A0A0J9YX57 407 aa26.2■■□□□ 1.78
LINC01960-201ENST00000563759 APPP05067 770 aa26.2■■□□□ 1.78
LINC01960-201ENST00000563759 SLC4A3P48751 1232 aa26.2■■□□□ 1.78
LINC01960-201ENST00000563759 AOC3Q16853 763 aa26.2■■□□□ 1.78
LINC01960-201ENST00000563759 LCORLQ8N3X6 602 aa26.2■■□□□ 1.78
LINC01960-201ENST00000563759 CTNNA3Q9UI47 895 aa26.2■■□□□ 1.78
LINC01960-201ENST00000563759 PSME4Q14997 1843 aa26.2■■□□□ 1.78
LINC01960-201ENST00000563759 ZNF646O15015 1829 aaPredicted RBP26.2■■□□□ 1.78
LINC01960-201ENST00000563759 FOXP2O15409 715 aa26.19■■□□□ 1.78
LINC01960-201ENST00000563759 NEK4P51957 841 aa26.19■■□□□ 1.78
LINC01960-201ENST00000563759 UPF3BQ9BZI7 483 aaKnown RBP26.19■■□□□ 1.78
LINC01960-201ENST00000563759 ARFGEF1Q9Y6D6 1849 aa26.19■■□□□ 1.78
LINC01960-201ENST00000563759 GNAT2P19087 354 aa26.19■■□□□ 1.78
LINC01960-201ENST00000563759 KIAA2012Q0VF49 1180 aa26.19■■□□□ 1.78
LINC01960-201ENST00000563759 PODNQ7Z5L7 613 aa26.19■■□□□ 1.78
LINC01960-201ENST00000563759 JAKMIP1Q96N16 626 aaKnown RBP26.19■■□□□ 1.78
LINC01960-201ENST00000563759 PSMD1Q99460 953 aa26.19■■□□□ 1.78
LINC01960-201ENST00000563759 BAZ2AQ9UIF9 1905 aaKnown RBP26.19■■□□□ 1.78
LINC01960-201ENST00000563759 PPIP5K2O43314 1243 aa26.18■■□□□ 1.78
LINC01960-201ENST00000563759 CYP21A2P08686 494 aa26.18■■□□□ 1.78
LINC01960-201ENST00000563759 ECE2O60344 883 aa26.17■■□□□ 1.78
LINC01960-201ENST00000563759 CD2BP2O95400 341 aaKnown RBP26.17■■□□□ 1.78
LINC01960-201ENST00000563759 CASTP20810 708 aaKnown RBP26.17■■□□□ 1.78
LINC01960-201ENST00000563759 GSTO1P78417 241 aa26.17■■□□□ 1.78
LINC01960-201ENST00000563759 KRT32Q14532 448 aa26.17■■□□□ 1.78
LINC01960-201ENST00000563759 ADCK5Q3MIX3 580 aa26.17■■□□□ 1.78
LINC01960-201ENST00000563759 TTLL5Q6EMB2 1281 aa26.17■■□□□ 1.78
LINC01960-201ENST00000563759 SLC4A4Q9Y6R1 1079 aa26.17■■□□□ 1.78
LINC01960-201ENST00000563759 RPAP1Q9BWH6 1393 aaPredicted RBP26.16■■□□□ 1.78
LINC01960-201ENST00000563759 FGAP02671 866 aa26.16■■□□□ 1.78
LINC01960-201ENST00000563759 GRIK5Q16478 980 aa26.16■■□□□ 1.78
LINC01960-201ENST00000563759 IMMTQ16891 758 aaKnown RBP26.16■■□□□ 1.78
LINC01960-201ENST00000563759 CDK5RAP2Q96SN8 1893 aa26.15■■□□□ 1.78
LINC01960-201ENST00000563759 PSMA5P28066 241 aa26.15■■□□□ 1.78
LINC01960-201ENST00000563759 TSGA10IPQ3SY00 556 aa26.15■■□□□ 1.78
LINC01960-201ENST00000563759 RIOK1Q9BRS2 568 aaKnown RBP26.15■■□□□ 1.78
LINC01960-201ENST00000563759 TAF6LQ9Y6J9 622 aa26.15■■□□□ 1.78
LINC01960-201ENST00000563759 PATL2C9JE40 543 aaKnown RBP26.15■■□□□ 1.78
LINC01960-201ENST00000563759 TM6SF1Q9BZW5 370 aa26.15■■□□□ 1.78
LINC01960-201ENST00000563759 DIXDC1Q155Q3 683 aa26.14■■□□□ 1.78
LINC01960-201ENST00000563759 NACAP1Q9BZK3 213 aa26.14■■□□□ 1.78
LINC01960-201ENST00000563759 AATFQ9NY61 560 aaKnown RBP eCLIP26.14■■□□□ 1.78
LINC01960-201ENST00000563759 ZMYM6O95789 1325 aa26.13■■□□□ 1.77
LINC01960-201ENST00000563759 DYNLL1P63167 89 aaKnown RBP26.13■■□□□ 1.77
LINC01960-201ENST00000563759 IL27Q8NEV9 243 aa26.13■■□□□ 1.77
LINC01960-201ENST00000563759 NAPBQ9H115 298 aa26.13■■□□□ 1.77
LINC01960-201ENST00000563759 BCS1LQ9Y276 419 aa26.13■■□□□ 1.77
LINC01960-201ENST00000563759 CYP46A1Q9Y6A2 500 aa26.13■■□□□ 1.77
LINC01960-201ENST00000563759 LAMB1P07942 1786 aa26.13■■□□□ 1.77
LINC01960-201ENST00000563759 K7ELQ4 463 aaPredicted RBP26.13■■□□□ 1.77
LINC01960-201ENST00000563759 PRKAB2O43741 272 aa26.13■■□□□ 1.77
LINC01960-201ENST00000563759 LDHCP07864 332 aa26.13■■□□□ 1.77
LINC01960-201ENST00000563759 IFNL3Q8IZI9 196 aa26.13■■□□□ 1.77
LINC01960-201ENST00000563759 NOL10Q9BSC4 688 aaKnown RBP26.13■■□□□ 1.77
LINC01960-201ENST00000563759 EPB41L4AQ9HCS5 686 aaPredicted RBP26.13■■□□□ 1.77
LINC01960-201ENST00000563759 GSG1L2A8MUP6 293 aa26.12■■□□□ 1.77
LINC01960-201ENST00000563759 TDO2P48775 406 aa26.12■■□□□ 1.77
LINC01960-201ENST00000563759 HAND2P61296 217 aa26.12■■□□□ 1.77
LINC01960-201ENST00000563759 SLF2Q8IX21 1173 aa26.12■■□□□ 1.77
LINC01960-201ENST00000563759 NLGN2Q8NFZ4 835 aa26.12■■□□□ 1.77
LINC01960-201ENST00000563759 ZNF277Q9NRM2 450 aaPredicted RBP26.12■■□□□ 1.77
LINC01960-201ENST00000563759 SUGT1Q9Y2Z0 365 aa26.12■■□□□ 1.77
LINC01960-201ENST00000563759 MROH7-TTC4A0A0A0MT08 1334 aa26.11■■□□□ 1.77
LINC01960-201ENST00000563759 ADAMTSL1Q8N6G6 1762 aa26.11■■□□□ 1.77
LINC01960-201ENST00000563759 ZNF213O14771 459 aa26.11■■□□□ 1.77
LINC01960-201ENST00000563759 LARGE2Q8N3Y3 721 aa26.11■■□□□ 1.77
LINC01960-201ENST00000563759 ZSWIM6Q9HCJ5 1215 aa26.11■■□□□ 1.77
LINC01960-201ENST00000563759 NAV1Q8NEY1 1877 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms