RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 RUSC1Q9BVN2 902 aa8.47□□□□□ -1.05
LINC00254-201ENST00000563416 TPSG1Q9NRR2 321 aa8.47□□□□□ -1.05
LINC00254-201ENST00000563416 AKAP2Q9Y2D5 859 aa8.47□□□□□ -1.05
LINC00254-201ENST00000563416 GNA15P30679 374 aa8.46□□□□□ -1.06
LINC00254-201ENST00000563416 Q6ZS46 218 aa8.46□□□□□ -1.06
LINC00254-201ENST00000563416 KIAA1211Q6ZU35 1233 aa8.46□□□□□ -1.06
LINC00254-201ENST00000563416 TP53INP1Q96A56 240 aa8.46□□□□□ -1.06
LINC00254-201ENST00000563416 CORO1BQ9BR76 489 aa8.46□□□□□ -1.06
LINC00254-201ENST00000563416 C12orf49Q9H741 205 aa8.46□□□□□ -1.06
LINC00254-201ENST00000563416 FAM8A1Q9UBU6 413 aa8.46□□□□□ -1.06
LINC00254-201ENST00000563416 GPN3Q9UHW5 284 aaPredicted RBP8.46□□□□□ -1.06
LINC00254-201ENST00000563416 BICRAQ9NZM4 1560 aa8.46□□□□□ -1.06
LINC00254-201ENST00000563416 LOC100289279A0A1B0GTE1 492 aa8.45□□□□□ -1.06
LINC00254-201ENST00000563416 HNRNPUQ00839 825 aaKnown RBP eCLIP8.45□□□□□ -1.06
LINC00254-201ENST00000563416 AP3B2Q13367 1082 aa8.45□□□□□ -1.06
LINC00254-201ENST00000563416 ANKRD34AQ69YU3 496 aa8.45□□□□□ -1.06
LINC00254-201ENST00000563416 DZIP1LQ8IYY4 767 aaKnown RBP8.45□□□□□ -1.06
LINC00254-201ENST00000563416 MEGF10Q96KG7 1140 aa8.45□□□□□ -1.06
LINC00254-201ENST00000563416 OSBPL7Q9BZF2 842 aa8.45□□□□□ -1.06
LINC00254-201ENST00000563416 PPM1HQ9ULR3 514 aa8.45□□□□□ -1.06
LINC00254-201ENST00000563416 MEGF11A6BM72 1044 aa8.44□□□□□ -1.06
LINC00254-201ENST00000563416 SART1O43290 800 aaKnown RBP8.44□□□□□ -1.06
LINC00254-201ENST00000563416 EIF4BP23588 611 aaKnown RBP8.44□□□□□ -1.06
LINC00254-201ENST00000563416 ITGAEP38570 1179 aa8.44□□□□□ -1.06
LINC00254-201ENST00000563416 POU4F3Q15319 338 aa8.44□□□□□ -1.06
LINC00254-201ENST00000563416 NUTM2GQ5VZR2 741 aa8.44□□□□□ -1.06
LINC00254-201ENST00000563416 FDX2Q6P4F2 183 aa8.44□□□□□ -1.06
LINC00254-201ENST00000563416 DUSP9Q99956 384 aaKnown RBP8.44□□□□□ -1.06
LINC00254-201ENST00000563416 SSBP4Q9BWG4 385 aaPredicted RBP8.44□□□□□ -1.06
LINC00254-201ENST00000563416 CYP4F12Q9HCS2 524 aa8.44□□□□□ -1.06
LINC00254-201ENST00000563416 TMEM39AQ9NV64 488 aa8.44□□□□□ -1.06
LINC00254-201ENST00000563416 MAOBP27338 520 aa8.43□□□□□ -1.06
LINC00254-201ENST00000563416 XPCQ01831 940 aaPredicted RBP8.43□□□□□ -1.06
LINC00254-201ENST00000563416 UVSSAQ2YD98 709 aa8.43□□□□□ -1.06
LINC00254-201ENST00000563416 EXOSC6Q5RKV6 272 aaKnown RBP8.43□□□□□ -1.06
LINC00254-201ENST00000563416 CEP44Q9C0F1 390 aa8.43□□□□□ -1.06
LINC00254-201ENST00000563416 NRSN2Q9GZP1 204 aa8.43□□□□□ -1.06
LINC00254-201ENST00000563416 FURINP09958 794 aa8.42□□□□□ -1.06
LINC00254-201ENST00000563416 H2AFB1P0C5Y9 115 aa8.42□□□□□ -1.06
LINC00254-201ENST00000563416 H2AFB2P0C5Z0 115 aa8.42□□□□□ -1.06
LINC00254-201ENST00000563416 ZNF157P51786 506 aaPredicted RBP8.42□□□□□ -1.06
LINC00254-201ENST00000563416 FAAP100Q0VG06 881 aa8.42□□□□□ -1.06
LINC00254-201ENST00000563416 C3orf58Q8NDZ4 430 aa8.42□□□□□ -1.06
LINC00254-201ENST00000563416 BCL11AQ9H165 835 aa8.42□□□□□ -1.06
LINC00254-201ENST00000563416 SCRIBQ14160 1630 aa8.42□□□□□ -1.06
LINC00254-201ENST00000563416 USP17L7P0C7H9 530 aa8.41□□□□□ -1.06
LINC00254-201ENST00000563416 FBXO33Q7Z6M2 555 aa8.41□□□□□ -1.06
LINC00254-201ENST00000563416 TRIM56Q9BRZ2 755 aaKnown RBP8.41□□□□□ -1.06
LINC00254-201ENST00000563416 TMPRSS13Q9BYE2 586 aa8.41□□□□□ -1.06
LINC00254-201ENST00000563416 SUGCTQ9HAC7 445 aa8.41□□□□□ -1.06
LINC00254-201ENST00000563416 PARP2Q9UGN5 583 aa8.41□□□□□ -1.06
LINC00254-201ENST00000563416 SAMM50Q9Y512 469 aa8.41□□□□□ -1.06
LINC00254-201ENST00000563416 AK5Q9Y6K8 562 aa8.41□□□□□ -1.06
LINC00254-201ENST00000563416 K7ELQ4 463 aaPredicted RBP8.4□□□□□ -1.06
LINC00254-201ENST00000563416 PSMD2Q13200 908 aa8.4□□□□□ -1.06
LINC00254-201ENST00000563416 RSPO4Q2I0M5 234 aaPredicted RBP8.4□□□□□ -1.06
LINC00254-201ENST00000563416 NKAPLQ5M9Q1 402 aa8.4□□□□□ -1.06
LINC00254-201ENST00000563416 SMG8Q8ND04 991 aaKnown RBP8.4□□□□□ -1.06
LINC00254-201ENST00000563416 ANKRD24Q8TF21 1146 aa8.4□□□□□ -1.06
LINC00254-201ENST00000563416 UTP4Q969X6 686 aaKnown RBP8.4□□□□□ -1.06
LINC00254-201ENST00000563416 DHX15O43143 795 aaKnown RBP8.39□□□□□ -1.07
LINC00254-201ENST00000563416 GAS2O43903 313 aaKnown RBP8.39□□□□□ -1.07
LINC00254-201ENST00000563416 MFAP1P55081 439 aaKnown RBP8.39□□□□□ -1.07
LINC00254-201ENST00000563416 PDE3AQ14432 1141 aa8.39□□□□□ -1.07
LINC00254-201ENST00000563416 TPTE2Q6XPS3 522 aa8.39□□□□□ -1.07
LINC00254-201ENST00000563416 C12orf50Q8NA57 414 aaPredicted RBP8.39□□□□□ -1.07
LINC00254-201ENST00000563416 FAM46AQ96IP4 442 aaKnown RBP8.39□□□□□ -1.07
LINC00254-201ENST00000563416 UBL7Q96S82 380 aaPredicted RBP8.39□□□□□ -1.07
LINC00254-201ENST00000563416 BCL2L13Q9BXK5 485 aa8.39□□□□□ -1.07
LINC00254-201ENST00000563416 MRS2Q9HD23 443 aa8.39□□□□□ -1.07
LINC00254-201ENST00000563416 RAD18Q9NS91 495 aa8.39□□□□□ -1.07
LINC00254-201ENST00000563416 DAB2P98082 770 aa8.38□□□□□ -1.07
LINC00254-201ENST00000563416 ZNF326Q5BKZ1 582 aaKnown RBP8.38□□□□□ -1.07
LINC00254-201ENST00000563416 NECAB3Q96P71 396 aaPredicted RBP8.38□□□□□ -1.07
LINC00254-201ENST00000563416 EMILIN2Q9BXX0 1053 aa8.38□□□□□ -1.07
LINC00254-201ENST00000563416 TTF2Q9UNY4 1162 aaKnown RBP8.38□□□□□ -1.07
LINC00254-201ENST00000563416 HIF3AQ9Y2N7 669 aa8.38□□□□□ -1.07
LINC00254-201ENST00000563416 DYRK3O43781 588 aa8.37□□□□□ -1.07
LINC00254-201ENST00000563416 DLGAP3O95886 979 aa8.37□□□□□ -1.07
LINC00254-201ENST00000563416 GSTP1P09211 210 aaKnown RBP8.37□□□□□ -1.07
LINC00254-201ENST00000563416 NME2P22392 152 aa8.37□□□□□ -1.07
LINC00254-201ENST00000563416 TRIM26Q12899 539 aaPredicted RBP8.37□□□□□ -1.07
LINC00254-201ENST00000563416 PRR23CQ6ZRP0 262 aa8.37□□□□□ -1.07
LINC00254-201ENST00000563416 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.37□□□□□ -1.07
LINC00254-201ENST00000563416 TMC4Q7Z404 712 aa8.37□□□□□ -1.07
LINC00254-201ENST00000563416 SULF2Q8IWU5 870 aa8.37□□□□□ -1.07
LINC00254-201ENST00000563416 MYRFLQ96LU7 910 aa8.37□□□□□ -1.07
LINC00254-201ENST00000563416 SEMA6BQ9H3T3 888 aa8.37□□□□□ -1.07
LINC00254-201ENST00000563416 SHROOM4Q9ULL8 1493 aa8.37□□□□□ -1.07
LINC00254-201ENST00000563416 SORBS3O60504 671 aa8.36□□□□□ -1.07
LINC00254-201ENST00000563416 ADAM23O75077 832 aa8.36□□□□□ -1.07
LINC00254-201ENST00000563416 PREPP48147 710 aa8.36□□□□□ -1.07
LINC00254-201ENST00000563416 KRT82Q9NSB4 513 aa8.36□□□□□ -1.07
LINC00254-201ENST00000563416 FBXO24O75426 580 aa8.35□□□□□ -1.07
LINC00254-201ENST00000563416 TIAF1O95411 115 aa8.35□□□□□ -1.07
LINC00254-201ENST00000563416 ECEL1O95672 775 aa8.35□□□□□ -1.07
LINC00254-201ENST00000563416 CTSBP07858 339 aa8.35□□□□□ -1.07
LINC00254-201ENST00000563416 ARNTP27540 789 aa8.35□□□□□ -1.07
LINC00254-201ENST00000563416 SOX4Q06945 474 aaPredicted RBP8.35□□□□□ -1.07
LINC00254-201ENST00000563416 ARMC10Q8N2F6 343 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms