RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 IREB2P48200 963 aaKnown RBP26.31■■□□□ 1.8
CHD9-208ENST00000563410 RFX5P48382 616 aaPredicted RBP26.31■■□□□ 1.8
CHD9-208ENST00000563410 SOX10P56693 466 aa26.31■■□□□ 1.8
CHD9-208ENST00000563410 INHBEP58166 350 aa26.31■■□□□ 1.8
CHD9-208ENST00000563410 TNFAIP1Q13829 316 aa26.31■■□□□ 1.8
CHD9-208ENST00000563410 PKN2Q16513 984 aaKnown RBP26.31■■□□□ 1.8
CHD9-208ENST00000563410 IFNL1Q8IU54 200 aa26.31■■□□□ 1.8
CHD9-208ENST00000563410 TEPSINQ96N21 525 aa26.31■■□□□ 1.8
CHD9-208ENST00000563410 HPS5Q9UPZ3 1129 aa26.31■■□□□ 1.8
CHD9-208ENST00000563410 ALDH1A1P00352 501 aa26.3■■□□□ 1.8
CHD9-208ENST00000563410 FGFR2P21802 821 aa26.3■■□□□ 1.8
CHD9-208ENST00000563410 GJA5P36382 358 aa26.3■■□□□ 1.8
CHD9-208ENST00000563410 BCAMP50895 628 aa26.3■■□□□ 1.8
CHD9-208ENST00000563410 CHAF1AQ13111 956 aaPredicted RBP26.3■■□□□ 1.8
CHD9-208ENST00000563410 CAVIN4Q5BKX8 364 aa26.3■■□□□ 1.8
CHD9-208ENST00000563410 CDAN1Q8IWY9 1227 aa26.3■■□□□ 1.8
CHD9-208ENST00000563410 IGF2BP3O00425 579 aaKnown RBP eCLIP26.29■■□□□ 1.8
CHD9-208ENST00000563410 FKTNO75072 461 aa26.29■■□□□ 1.8
CHD9-208ENST00000563410 ANKRD13AQ8IZ07 590 aa26.29■■□□□ 1.8
CHD9-208ENST00000563410 TBC1D22AQ8WUA7 517 aa26.29■■□□□ 1.8
CHD9-208ENST00000563410 TCP10L2B9ZVM9 353 aa26.28■■□□□ 1.8
CHD9-208ENST00000563410 HDLBPQ00341 1268 aaKnown RBP26.28■■□□□ 1.8
CHD9-208ENST00000563410 SMC4Q9NTJ3 1288 aa26.28■■□□□ 1.8
CHD9-208ENST00000563410 KIF16BQ96L93 1317 aa26.28■■□□□ 1.8
CHD9-208ENST00000563410 FRAT2O75474 233 aaPredicted RBP26.27■■□□□ 1.8
CHD9-208ENST00000563410 PUM3Q15397 648 aaKnown RBP26.27■■□□□ 1.8
CHD9-208ENST00000563410 TMEM39BQ9GZU3 492 aa26.27■■□□□ 1.8
CHD9-208ENST00000563410 EYA2O00167 538 aa26.26■■□□□ 1.79
CHD9-208ENST00000563410 IFIT1P09914 478 aaKnown RBP26.25■■□□□ 1.79
CHD9-208ENST00000563410 ATG9AQ7Z3C6 839 aa26.25■■□□□ 1.79
CHD9-208ENST00000563410 FBXO46Q6PJ61 603 aaPredicted RBP26.24■■□□□ 1.79
CHD9-208ENST00000563410 TEKT1Q969V4 418 aa26.24■■□□□ 1.79
CHD9-208ENST00000563410 MRIQ9BWK5 157 aa26.24■■□□□ 1.79
CHD9-208ENST00000563410 ELP3Q9H9T3 547 aa26.24■■□□□ 1.79
CHD9-208ENST00000563410 TESPA1A2RU30 521 aaPredicted RBP26.23■■□□□ 1.79
CHD9-208ENST00000563410 TNNI2P48788 182 aa26.23■■□□□ 1.79
CHD9-208ENST00000563410 CACNB3P54284 484 aa26.23■■□□□ 1.79
CHD9-208ENST00000563410 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.23■■□□□ 1.79
CHD9-208ENST00000563410 PTPN18Q99952 460 aa26.23■■□□□ 1.79
CHD9-208ENST00000563410 LPIN2Q92539 896 aa26.22■■□□□ 1.79
CHD9-208ENST00000563410 OPTNQ96CV9 577 aa26.22■■□□□ 1.79
CHD9-208ENST00000563410 ZDHHC15Q96MV8 337 aa26.22■■□□□ 1.79
CHD9-208ENST00000563410 NOB1Q9ULX3 412 aaKnown RBP26.22■■□□□ 1.79
CHD9-208ENST00000563410 SUGT1Q9Y2Z0 365 aa26.22■■□□□ 1.79
CHD9-208ENST00000563410 HTTP42858 3142 aa26.22■■□□□ 1.79
CHD9-208ENST00000563410 CT47B1P0C2W7 299 aaPredicted RBP26.21■■□□□ 1.79
CHD9-208ENST00000563410 APOBEC3HQ6NTF7 200 aaKnown RBP26.21■■□□□ 1.79
CHD9-208ENST00000563410 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.21■■□□□ 1.793e-9■■■□□ 16.8
CHD9-208ENST00000563410 UBTFL1P0CB47 393 aaPredicted RBP26.2■■□□□ 1.78
CHD9-208ENST00000563410 SLC5A1P13866 664 aa26.2■■□□□ 1.78
CHD9-208ENST00000563410 CNKSR2Q8WXI2 1034 aa26.2■■□□□ 1.78
CHD9-208ENST00000563410 MS4A4AQ96JQ5 239 aa26.2■■□□□ 1.78
CHD9-208ENST00000563410 MAST3O60307 1309 aa26.19■■□□□ 1.78
CHD9-208ENST00000563410 MAP3K9P80192 1104 aa26.19■■□□□ 1.78
CHD9-208ENST00000563410 CRHR2Q13324 411 aa26.19■■□□□ 1.78
CHD9-208ENST00000563410 VGLL4Q14135 290 aa26.19■■□□□ 1.78
CHD9-208ENST00000563410 OTUD7BQ6GQQ9 843 aa26.18■■□□□ 1.78
CHD9-208ENST00000563410 HHIPL2Q6UWX4 724 aa26.18■■□□□ 1.78
CHD9-208ENST00000563410 SIL1Q9H173 461 aa26.18■■□□□ 1.78
CHD9-208ENST00000563410 FBXO3Q9UK99 471 aa26.18■■□□□ 1.78
CHD9-208ENST00000563410 CIAO1O76071 339 aa26.17■■□□□ 1.78
CHD9-208ENST00000563410 FKBP1CQ5VVH2 108 aa26.17■■□□□ 1.78
CHD9-208ENST00000563410 OTOP1Q7RTM1 612 aa26.17■■□□□ 1.78
CHD9-208ENST00000563410 FAM83AQ86UY5 434 aa26.17■■□□□ 1.78
CHD9-208ENST00000563410 AK9Q5TCS8 1911 aa26.17■■□□□ 1.78
CHD9-208ENST00000563410 WDR66Q8TBY9 1149 aa26.16■■□□□ 1.78
CHD9-208ENST00000563410 API5Q9BZZ5 524 aaKnown RBP26.16■■□□□ 1.78
CHD9-208ENST00000563410 TRIM17Q9Y577 477 aa26.16■■□□□ 1.78
CHD9-208ENST00000563410 LRRFIP2Q9Y608 721 aaKnown RBP26.16■■□□□ 1.78
CHD9-208ENST00000563410 CENPFP49454 3210 aa26.16■■□□□ 1.78
CHD9-208ENST00000563410 BRI3BPQ8WY22 251 aa26.15■■□□□ 1.78
CHD9-208ENST00000563410 TMOD2Q9NZR1 351 aa26.15■■□□□ 1.78
CHD9-208ENST00000563410 CSADQ9Y600 493 aa26.15■■□□□ 1.78
CHD9-208ENST00000563410 CCER2I3L3R5 266 aa26.14■■□□□ 1.78
CHD9-208ENST00000563410 ATP2B3Q16720 1220 aa26.14■■□□□ 1.78
CHD9-208ENST00000563410 CEP126Q9P2H0 1117 aa26.14■■□□□ 1.78
CHD9-208ENST00000563410 PA2G4Q9UQ80 394 aaKnown RBP26.14■■□□□ 1.78
CHD9-208ENST00000563410 RPAP1Q9BWH6 1393 aaPredicted RBP26.14■■□□□ 1.78
CHD9-208ENST00000563410 RARSP54136 660 aaKnown RBP26.13■■□□□ 1.77
CHD9-208ENST00000563410 CAP1Q01518 475 aa26.13■■□□□ 1.77
CHD9-208ENST00000563410 CD99L2Q8TCZ2 262 aa26.13■■□□□ 1.77
CHD9-208ENST00000563410 OTUD5Q96G74 571 aa26.13■■□□□ 1.77
CHD9-208ENST00000563410 ERO1AQ96HE7 468 aa26.13■■□□□ 1.77
CHD9-208ENST00000563410 MEIS3Q99687 375 aa26.13■■□□□ 1.77
CHD9-208ENST00000563410 SNCAIPQ9Y6H5 919 aa26.13■■□□□ 1.77
CHD9-208ENST00000563410 MYH2Q9UKX2 1941 aa26.13■■□□□ 1.77
CHD9-208ENST00000563410 CCL15-CCL14A0A0B4J2E2 113 aa26.12■■□□□ 1.77
CHD9-208ENST00000563410 PRDX5P30044 214 aa26.12■■□□□ 1.77
CHD9-208ENST00000563410 GTF2A2P52657 109 aa26.12■■□□□ 1.77
CHD9-208ENST00000563410 CCL15Q16663 113 aa26.12■■□□□ 1.77
CHD9-208ENST00000563410 DAGLAQ9Y4D2 1042 aa26.12■■□□□ 1.77
CHD9-208ENST00000563410 KIAA0100Q14667 2235 aaKnown RBP26.11■■□□□ 1.77
CHD9-208ENST00000563410 SPDYE5A6NIY4 337 aa26.11■■□□□ 1.77
CHD9-208ENST00000563410 IL15P40933 162 aaPredicted RBP26.11■■□□□ 1.77
CHD9-208ENST00000563410 DIXDC1Q155Q3 683 aa26.11■■□□□ 1.77
CHD9-208ENST00000563410 ZKSCAN4Q969J2 545 aaPredicted RBP26.11■■□□□ 1.77
CHD9-208ENST00000563410 WRNIP1Q96S55 665 aa26.11■■□□□ 1.77
CHD9-208ENST00000563410 COPRSQ9NQ92 184 aa26.11■■□□□ 1.77
CHD9-208ENST00000563410 PHKA1P46020 1223 aa26.1■■□□□ 1.77
CHD9-208ENST00000563410 SP3Q02447 781 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms