RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 TBC1D9Q6ZT07 1266 aa22.86■■□□□ 1.25
RAB40C-207ENST00000563109 RAI14Q9P0K7 980 aa22.86■■□□□ 1.25
RAB40C-207ENST00000563109 MYH7P12883 1935 aa22.86■■□□□ 1.25
RAB40C-207ENST00000563109 AK9Q5TCS8 1911 aa22.85■■□□□ 1.25
RAB40C-207ENST00000563109 IGSF3O75054 1194 aa22.85■■□□□ 1.25
RAB40C-207ENST00000563109 PIH1D3Q9NQM4 214 aaKnown RBP22.85■■□□□ 1.25
RAB40C-207ENST00000563109 IDH1O75874 414 aaKnown RBP22.84■■□□□ 1.25
RAB40C-207ENST00000563109 ZNF280AP59817 542 aaPredicted RBP22.84■■□□□ 1.25
RAB40C-207ENST00000563109 MAP3K12Q12852 859 aa22.84■■□□□ 1.25
RAB40C-207ENST00000563109 GRIK5Q16478 980 aa22.84■■□□□ 1.25
RAB40C-207ENST00000563109 SLF2Q8IX21 1173 aa22.84■■□□□ 1.25
RAB40C-207ENST00000563109 ANTXR1Q9H6X2 564 aa22.84■■□□□ 1.25
RAB40C-207ENST00000563109 GPBP1L1Q9HC44 474 aaPredicted RBP22.84■■□□□ 1.25
RAB40C-207ENST00000563109 ADARB2Q9NS39 739 aaKnown RBP22.84■■□□□ 1.25
RAB40C-207ENST00000563109 ADAMTSL1Q8N6G6 1762 aa22.84■■□□□ 1.25
RAB40C-207ENST00000563109 MYH2Q9UKX2 1941 aa22.83■■□□□ 1.25
RAB40C-207ENST00000563109 VEGFAP15692 232 aaPredicted RBP22.83■■□□□ 1.25
RAB40C-207ENST00000563109 EPS15P42566 896 aa22.83■■□□□ 1.25
RAB40C-207ENST00000563109 GSTO1P78417 241 aa22.83■■□□□ 1.25
RAB40C-207ENST00000563109 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.83■■□□□ 1.25
RAB40C-207ENST00000563109 MAP4K4O95819 1239 aaPredicted RBP22.82■■□□□ 1.24
RAB40C-207ENST00000563109 EPHX2P34913 555 aa22.82■■□□□ 1.24
RAB40C-207ENST00000563109 HDLBPQ00341 1268 aaKnown RBP22.82■■□□□ 1.24
RAB40C-207ENST00000563109 TEKT1Q969V4 418 aa22.82■■□□□ 1.24
RAB40C-207ENST00000563109 EDC3Q96F86 508 aaKnown RBP22.82■■□□□ 1.24
RAB40C-207ENST00000563109 RRAGCQ9HB90 399 aa22.82■■□□□ 1.24
RAB40C-207ENST00000563109 MYOZ2Q9NPC6 264 aa22.82■■□□□ 1.24
RAB40C-207ENST00000563109 SERPINA10Q9UK55 444 aa22.82■■□□□ 1.24
RAB40C-207ENST00000563109 SHTN1A0MZ66 631 aa22.81■■□□□ 1.24
RAB40C-207ENST00000563109 CRKP46108 304 aa22.81■■□□□ 1.24
RAB40C-207ENST00000563109 RGS3P49796 1198 aa22.81■■□□□ 1.24
RAB40C-207ENST00000563109 RBM5P52756 815 aaKnown RBP eCLIP22.81■■□□□ 1.24
RAB40C-207ENST00000563109 MECOMQ03112 1051 aa22.81■■□□□ 1.24
RAB40C-207ENST00000563109 KIF4BQ2VIQ3 1234 aa22.81■■□□□ 1.24
RAB40C-207ENST00000563109 NMRK2Q9NPI5 230 aa22.81■■□□□ 1.24
RAB40C-207ENST00000563109 ECM29Q5VYK3 1845 aa22.8■■□□□ 1.24
RAB40C-207ENST00000563109 TRIM6-TRIM34B2RNG4 842 aa22.8■■□□□ 1.24
RAB40C-207ENST00000563109 DLGAP5Q15398 846 aa22.8■■□□□ 1.24
RAB40C-207ENST00000563109 LRRFIP1Q32MZ4 808 aaKnown RBP22.8■■□□□ 1.24
RAB40C-207ENST00000563109 TBC1D10BQ4KMP7 808 aaPredicted RBP22.8■■□□□ 1.24
RAB40C-207ENST00000563109 TTC22Q5TAA0 569 aa22.8■■□□□ 1.24
RAB40C-207ENST00000563109 NAA16Q6N069 864 aaPredicted RBP22.8■■□□□ 1.24
RAB40C-207ENST00000563109 ZSCAN25Q6NSZ9 544 aa22.8■■□□□ 1.24
RAB40C-207ENST00000563109 TMED8Q6PL24 325 aaPredicted RBP22.8■■□□□ 1.24
RAB40C-207ENST00000563109 CNTROBQ8N137 903 aa22.8■■□□□ 1.24
RAB40C-207ENST00000563109 KBTBD3Q8NAB2 608 aa22.8■■□□□ 1.24
RAB40C-207ENST00000563109 FSD1Q9BTV5 496 aa22.8■■□□□ 1.24
RAB40C-207ENST00000563109 TAF1DQ9H5J8 278 aaPredicted RBP22.8■■□□□ 1.24
RAB40C-207ENST00000563109 POTECB2RU33 542 aa22.79■■□□□ 1.24
RAB40C-207ENST00000563109 LDHCP07864 332 aa22.79■■□□□ 1.24
RAB40C-207ENST00000563109 CFAP100Q494V2 611 aa22.79■■□□□ 1.24
RAB40C-207ENST00000563109 RBM26Q5T8P6 1007 aaKnown RBP22.79■■□□□ 1.24
RAB40C-207ENST00000563109 USP50Q70EL3 339 aaPredicted RBP22.79■■□□□ 1.24
RAB40C-207ENST00000563109 SAMD7Q7Z3H4 446 aa22.79■■□□□ 1.24
RAB40C-207ENST00000563109 PNMA8AQ86V59 439 aaPredicted RBP22.79■■□□□ 1.24
RAB40C-207ENST00000563109 NSUN4Q96CB9 384 aaKnown RBP22.79■■□□□ 1.24
RAB40C-207ENST00000563109 EVI5LQ96CN4 794 aa22.79■■□□□ 1.24
RAB40C-207ENST00000563109 MRIQ9BWK5 157 aa22.79■■□□□ 1.24
RAB40C-207ENST00000563109 DIXDC1Q155Q3 683 aa22.78■■□□□ 1.24
RAB40C-207ENST00000563109 HHIPL2Q6UWX4 724 aa22.78■■□□□ 1.24
RAB40C-207ENST00000563109 NOL10Q9BSC4 688 aaKnown RBP22.78■■□□□ 1.24
RAB40C-207ENST00000563109 MROH7-TTC4A0A0A0MT08 1334 aa22.78■■□□□ 1.24
RAB40C-207ENST00000563109 EAPPQ56P03 285 aaPredicted RBP22.77■■□□□ 1.24
RAB40C-207ENST00000563109 SLC9C2Q5TAH2 1124 aa22.77■■□□□ 1.24
RAB40C-207ENST00000563109 SKAP1Q86WV1 359 aa22.77■■□□□ 1.24
RAB40C-207ENST00000563109 MAGEB6Q8N7X4 407 aa22.77■■□□□ 1.24
RAB40C-207ENST00000563109 MTMR14Q8NCE2 650 aa22.77■■□□□ 1.24
RAB40C-207ENST00000563109 TRPM4Q8TD43 1214 aa22.77■■□□□ 1.24
RAB40C-207ENST00000563109 RILPL2Q969X0 211 aa22.77■■□□□ 1.24
RAB40C-207ENST00000563109 ZDHHC15Q96MV8 337 aa22.77■■□□□ 1.24
RAB40C-207ENST00000563109 MYO1BO43795 1136 aa22.76■■□□□ 1.23
RAB40C-207ENST00000563109 PDE6AP16499 860 aa22.76■■□□□ 1.23
RAB40C-207ENST00000563109 CYP7A1P22680 504 aa22.76■■□□□ 1.23
RAB40C-207ENST00000563109 DAGLAQ9Y4D2 1042 aa22.76■■□□□ 1.23
RAB40C-207ENST00000563109 GAKO14976 1311 aa22.76■■□□□ 1.23
RAB40C-207ENST00000563109 RFX7Q2KHR2 1363 aa22.76■■□□□ 1.23
RAB40C-207ENST00000563109 SPDYE2BA6NHP3 402 aa22.75■■□□□ 1.23
RAB40C-207ENST00000563109 ZFYP08048 801 aaPredicted RBP22.75■■□□□ 1.23
RAB40C-207ENST00000563109 SPDYE6P0CI01 402 aa22.75■■□□□ 1.23
RAB40C-207ENST00000563109 ZNF784Q8NCA9 323 aaPredicted RBP22.75■■□□□ 1.23
RAB40C-207ENST00000563109 EGFRP00533 1210 aa22.74■■□□□ 1.23
RAB40C-207ENST00000563109 GSPT1P15170 499 aaKnown RBP22.74■■□□□ 1.23
RAB40C-207ENST00000563109 ADD2P35612 726 aa22.74■■□□□ 1.23
RAB40C-207ENST00000563109 ZNF384Q8TF68 577 aa22.74■■□□□ 1.23
RAB40C-207ENST00000563109 FAM163AQ96GL9 167 aaPredicted RBP22.74■■□□□ 1.23
RAB40C-207ENST00000563109 WNT10BO00744 389 aa22.73■■□□□ 1.23
RAB40C-207ENST00000563109 BTDP43251 543 aa22.73■■□□□ 1.23
RAB40C-207ENST00000563109 TMOD2Q9NZR1 351 aa22.73■■□□□ 1.23
RAB40C-207ENST00000563109 CLEC11AQ9Y240 323 aa22.73■■□□□ 1.23
RAB40C-207ENST00000563109 ZNF532Q9HCE3 1301 aa22.73■■□□□ 1.23
RAB40C-207ENST00000563109 RNF113AO15541 343 aaKnown RBP22.72■■□□□ 1.23
RAB40C-207ENST00000563109 BAG3O95817 575 aa22.72■■□□□ 1.23
RAB40C-207ENST00000563109 UBE3CQ15386 1083 aa22.72■■□□□ 1.23
RAB40C-207ENST00000563109 TICAM2Q86XR7 235 aa22.72■■□□□ 1.23
RAB40C-207ENST00000563109 CERS3Q8IU89 383 aa22.72■■□□□ 1.23
RAB40C-207ENST00000563109 ZBED3Q96IU2 234 aaPredicted RBP22.72■■□□□ 1.23
RAB40C-207ENST00000563109 PRMT6Q96LA8 375 aaPredicted RBP22.72■■□□□ 1.23
RAB40C-207ENST00000563109 HIRAP54198 1017 aaPredicted RBP22.71■■□□□ 1.23
RAB40C-207ENST00000563109 NBPF9Q3BBW0 867 aa22.71■■□□□ 1.23
RAB40C-207ENST00000563109 LDHDQ86WU2 507 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms