RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 XRN1Q8IZH2 1706 aaKnown RBP8.73□□□□□ -1.01
TCF4-216ENST00000562680 SERPINB2P05120 415 aa8.73□□□□□ -1.01
TCF4-216ENST00000562680 ATL3Q6DD88 541 aa8.73□□□□□ -1.01
TCF4-216ENST00000562680 PLA2G12BQ9BX93 195 aa8.73□□□□□ -1.01
TCF4-216ENST00000562680 DDX19AQ9NUU7 478 aaKnown RBP8.73□□□□□ -1.01
TCF4-216ENST00000562680 ABCC12Q96J65 1359 aa8.73□□□□□ -1.01
TCF4-216ENST00000562680 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.73□□□□□ -1.01
TCF4-216ENST00000562680 RGL2O15211 777 aa8.73□□□□□ -1.01
TCF4-216ENST00000562680 HSPA1LP34931 641 aa8.73□□□□□ -1.01
TCF4-216ENST00000562680 ZAP70P43403 619 aa8.73□□□□□ -1.01
TCF4-216ENST00000562680 CHRNDQ07001 517 aa8.73□□□□□ -1.01
TCF4-216ENST00000562680 CCDC102BQ68D86 513 aa8.73□□□□□ -1.01
TCF4-216ENST00000562680 TEX11Q8IYF3 940 aa8.73□□□□□ -1.01
TCF4-216ENST00000562680 RGS12O14924 1447 aa8.73□□□□□ -1.01
TCF4-216ENST00000562680 ADCY9O60503 1353 aa8.73□□□□□ -1.01
TCF4-216ENST00000562680 PES1O00541 588 aaKnown RBP8.73□□□□□ -1.01
TCF4-216ENST00000562680 SLC27A2O14975 620 aa8.73□□□□□ -1.01
TCF4-216ENST00000562680 CALML3P27482 149 aa8.73□□□□□ -1.01
TCF4-216ENST00000562680 SMC2O95347 1197 aa8.73□□□□□ -1.01
TCF4-216ENST00000562680 ZSCAN22P10073 491 aaPredicted RBP8.73□□□□□ -1.01
TCF4-216ENST00000562680 RPS6KB1P23443 525 aa8.73□□□□□ -1.01
TCF4-216ENST00000562680 NASPP49321 788 aaPredicted RBP8.73□□□□□ -1.01
TCF4-216ENST00000562680 NLRP5P59047 1200 aa8.73□□□□□ -1.01
TCF4-216ENST00000562680 GRIPAP1Q4V328 841 aa8.73□□□□□ -1.01
TCF4-216ENST00000562680 PAIP2Q9BPZ3 127 aaKnown RBP8.73□□□□□ -1.01
TCF4-216ENST00000562680 COL5A2P05997 1499 aaPredicted RBP8.72□□□□□ -1.01
TCF4-216ENST00000562680 GSPT1P15170 499 aaKnown RBP8.72□□□□□ -1.01
TCF4-216ENST00000562680 CCT2P78371 535 aaKnown RBP8.72□□□□□ -1.01
TCF4-216ENST00000562680 TNIP1Q15025 636 aa8.72□□□□□ -1.01
TCF4-216ENST00000562680 CREBRFQ8IUR6 639 aa8.72□□□□□ -1.01
TCF4-216ENST00000562680 CEP57L1Q8IYX8 460 aa8.72□□□□□ -1.01
TCF4-216ENST00000562680 TTLL11Q8NHH1 800 aa8.72□□□□□ -1.01
TCF4-216ENST00000562680 MON2Q7Z3U7 1717 aa8.72□□□□□ -1.01
TCF4-216ENST00000562680 FILIP1LQ4L180 1135 aa8.72□□□□□ -1.01
TCF4-216ENST00000562680 TNPO1Q92973 898 aaKnown RBP8.72□□□□□ -1.01
TCF4-216ENST00000562680 SH2D4AQ9H788 454 aa8.72□□□□□ -1.01
TCF4-216ENST00000562680 DBNLQ9UJU6 430 aaKnown RBP8.72□□□□□ -1.01
TCF4-216ENST00000562680 STX8Q9UNK0 236 aa8.72□□□□□ -1.01
TCF4-216ENST00000562680 TAF5LO75529 589 aa8.72□□□□□ -1.01
TCF4-216ENST00000562680 CAVIN2O95810 425 aa8.72□□□□□ -1.01
TCF4-216ENST00000562680 AK2P54819 239 aa8.72□□□□□ -1.01
TCF4-216ENST00000562680 CEBPZQ03701 1054 aaKnown RBP8.72□□□□□ -1.01
TCF4-216ENST00000562680 LRRC24Q50LG9 513 aa8.72□□□□□ -1.01
TCF4-216ENST00000562680 FERMT3Q86UX7 667 aa8.72□□□□□ -1.01
TCF4-216ENST00000562680 SIRT2Q8IXJ6 389 aa8.72□□□□□ -1.01
TCF4-216ENST00000562680 FEZ1Q99689 392 aa8.72□□□□□ -1.01
TCF4-216ENST00000562680 ZNF804BA4D1E1 1349 aa8.72□□□□□ -1.01
TCF4-216ENST00000562680 ZNF142P52746 1687 aaPredicted RBP8.72□□□□□ -1.01
TCF4-216ENST00000562680 CARMIL3Q8ND23 1372 aa8.72□□□□□ -1.01
TCF4-216ENST00000562680 MAP3K11Q16584 847 aa8.72□□□□□ -1.01
TCF4-216ENST00000562680 CNTNAP4Q9C0A0 1308 aa8.72□□□□□ -1.01
TCF4-216ENST00000562680 KIF20AO95235 890 aa8.71□□□□□ -1.01
TCF4-216ENST00000562680 EIF5P55010 431 aaKnown RBP8.71□□□□□ -1.01
TCF4-216ENST00000562680 TMEM266Q2M3C6 531 aa8.71□□□□□ -1.01
TCF4-216ENST00000562680 RABL6Q3YEC7 729 aaPredicted RBP8.71□□□□□ -1.01
TCF4-216ENST00000562680 MIGA1Q8NAN2 632 aa8.71□□□□□ -1.01
TCF4-216ENST00000562680 ARPP21Q9UBL0 812 aaPredicted RBP8.71□□□□□ -1.01
TCF4-216ENST00000562680 NRXN3Q9Y4C0 1643 aa8.71□□□□□ -1.01
TCF4-216ENST00000562680 ZNF532Q9HCE3 1301 aa8.71□□□□□ -1.01
TCF4-216ENST00000562680 RPAP1Q9BWH6 1393 aaPredicted RBP8.71□□□□□ -1.01
TCF4-216ENST00000562680 CCDC183Q5T5S1 534 aa8.71□□□□□ -1.01
TCF4-216ENST00000562680 C2CD5Q86YS7 1000 aa8.71□□□□□ -1.01
TCF4-216ENST00000562680 SNX14Q9Y5W7 946 aa8.71□□□□□ -1.01
TCF4-216ENST00000562680 MEGF6O75095 1541 aa8.71□□□□□ -1.02
TCF4-216ENST00000562680 NBPF26B4DH59 902 aa8.71□□□□□ -1.02
TCF4-216ENST00000562680 ZNF76P36508 570 aa8.71□□□□□ -1.02
TCF4-216ENST00000562680 NBPF10Q6P3W6 841 aaKnown RBP8.71□□□□□ -1.02
TCF4-216ENST00000562680 NBPF15Q8N660 670 aa8.71□□□□□ -1.02
TCF4-216ENST00000562680 MARCH10Q8NA82 808 aaPredicted RBP8.71□□□□□ -1.02
TCF4-216ENST00000562680 SLC26A6Q9BXS9 759 aa8.71□□□□□ -1.02
TCF4-216ENST00000562680 BSDC1Q9NW68 430 aaPredicted RBP8.71□□□□□ -1.02
TCF4-216ENST00000562680 CCDC39Q9UFE4 941 aa8.71□□□□□ -1.02
TCF4-216ENST00000562680 RIMBP2O15034 1052 aa8.71□□□□□ -1.02
TCF4-216ENST00000562680 PDE6AP16499 860 aa8.71□□□□□ -1.02
TCF4-216ENST00000562680 FAM227BQ96M60 508 aa8.71□□□□□ -1.02
TCF4-216ENST00000562680 ANGEL1Q9UNK9 670 aaKnown RBP8.71□□□□□ -1.02
TCF4-216ENST00000562680 KDM4AO75164 1064 aa8.71□□□□□ -1.02
TCF4-216ENST00000562680 BAG4O95429 457 aaKnown RBP8.71□□□□□ -1.02
TCF4-216ENST00000562680 KRT18P05783 430 aaKnown RBP8.71□□□□□ -1.02
TCF4-216ENST00000562680 GRAPQ13588 217 aa8.71□□□□□ -1.02
TCF4-216ENST00000562680 SUSD4Q5VX71 490 aa8.71□□□□□ -1.02
TCF4-216ENST00000562680 GRAPLQ8TC17 118 aaPredicted RBP8.71□□□□□ -1.02
TCF4-216ENST00000562680 BRAPQ7Z569 592 aa8.7□□□□□ -1.02
TCF4-216ENST00000562680 LARGE2Q8N3Y3 721 aa8.7□□□□□ -1.02
TCF4-216ENST00000562680 KCNG4Q8TDN1 519 aa8.7□□□□□ -1.02
TCF4-216ENST00000562680 ALG1Q9BT22 464 aa8.7□□□□□ -1.02
TCF4-216ENST00000562680 NPR1P16066 1061 aa8.7□□□□□ -1.02
TCF4-216ENST00000562680 UBE2HP62256 183 aa8.7□□□□□ -1.02
TCF4-216ENST00000562680 ABCC6O95255 1503 aa8.7□□□□□ -1.02
TCF4-216ENST00000562680 TNS2Q63HR2 1409 aa8.7□□□□□ -1.02
TCF4-216ENST00000562680 ERFEQ4G0M1 354 aa8.7□□□□□ -1.02
TCF4-216ENST00000562680 ZMYM1Q5SVZ6 1142 aa8.7□□□□□ -1.02
TCF4-216ENST00000562680 KANK3Q6NY19 840 aa8.7□□□□□ -1.02
TCF4-216ENST00000562680 NIM1KQ8IY84 436 aa8.7□□□□□ -1.02
TCF4-216ENST00000562680 GPATCH11Q8N954 259 aa8.7□□□□□ -1.02
TCF4-216ENST00000562680 SMTNL1A8MU46 457 aa8.7□□□□□ -1.02
TCF4-216ENST00000562680 NF2P35240 595 aa8.7□□□□□ -1.02
TCF4-216ENST00000562680 GLT8D2Q9H1C3 349 aa8.7□□□□□ -1.02
TCF4-216ENST00000562680 MAGEC2Q9UBF1 373 aaPredicted RBP8.7□□□□□ -1.02
TCF4-216ENST00000562680 EIF6P56537 245 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms