RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 CRCPO75575 148 aa12.66□□□□□ -0.38
RPAP1-204ENST00000562303 ZKSCAN3Q9BRR0 538 aa12.66□□□□□ -0.38
RPAP1-204ENST00000562303 SMTNP53814 917 aa12.66□□□□□ -0.38
RPAP1-204ENST00000562303 KLHL40Q2TBA0 621 aa12.66□□□□□ -0.38
RPAP1-204ENST00000562303 LETM2Q2VYF4 491 aa12.66□□□□□ -0.38
RPAP1-204ENST00000562303 ANKRD44Q8N8A2 993 aa12.66□□□□□ -0.38
RPAP1-204ENST00000562303 AGTPBP1Q9UPW5 1226 aa12.66□□□□□ -0.38
RPAP1-204ENST00000562303 NOP56O00567 594 aaKnown RBP12.66□□□□□ -0.38
RPAP1-204ENST00000562303 F13A1P00488 732 aa12.66□□□□□ -0.38
RPAP1-204ENST00000562303 DNM1Q05193 864 aaKnown RBP12.66□□□□□ -0.38
RPAP1-204ENST00000562303 CWF19L2Q2TBE0 894 aaKnown RBP12.66□□□□□ -0.38
RPAP1-204ENST00000562303 SV2BQ7L1I2 683 aa12.66□□□□□ -0.38
RPAP1-204ENST00000562303 IPO4Q8TEX9 1081 aaKnown RBP12.66□□□□□ -0.38
RPAP1-204ENST00000562303 GUCA1BQ9UMX6 200 aa12.66□□□□□ -0.38
RPAP1-204ENST00000562303 PLB1Q6P1J6 1458 aa12.66□□□□□ -0.38
RPAP1-204ENST00000562303 INF2Q27J81 1249 aa12.66□□□□□ -0.38
RPAP1-204ENST00000562303 FAM200AQ8TCP9 573 aa12.66□□□□□ -0.38
RPAP1-204ENST00000562303 MTUS1Q9ULD2 1270 aa12.66□□□□□ -0.38
RPAP1-204ENST00000562303 C11orf95C9JLR9 678 aaPredicted RBP12.65□□□□□ -0.38
RPAP1-204ENST00000562303 EPB41P11171 864 aaKnown RBP12.65□□□□□ -0.38
RPAP1-204ENST00000562303 KRT9P35527 623 aa12.65□□□□□ -0.38
RPAP1-204ENST00000562303 EIF6P56537 245 aaKnown RBP12.65□□□□□ -0.38
RPAP1-204ENST00000562303 BIRC2Q13490 618 aa12.65□□□□□ -0.38
RPAP1-204ENST00000562303 KIFAP3Q92845 792 aa12.65□□□□□ -0.38
RPAP1-204ENST00000562303 PPP1R9BQ96SB3 815 aa12.65□□□□□ -0.38
RPAP1-204ENST00000562303 ARFGAP3Q9NP61 516 aa12.65□□□□□ -0.38
RPAP1-204ENST00000562303 MTRF1LQ9UGC7 380 aaKnown RBP12.65□□□□□ -0.38
RPAP1-204ENST00000562303 MBD4O95243 580 aa12.65□□□□□ -0.38
RPAP1-204ENST00000562303 CCT6AP40227 531 aaKnown RBP12.65□□□□□ -0.38
RPAP1-204ENST00000562303 MCM6Q14566 821 aa12.65□□□□□ -0.38
RPAP1-204ENST00000562303 SEL1L2Q5TEA6 688 aa12.65□□□□□ -0.38
RPAP1-204ENST00000562303 CCDC186Q7Z3E2 898 aa12.65□□□□□ -0.38
RPAP1-204ENST00000562303 ZNF710Q8N1W2 664 aa12.65□□□□□ -0.38
RPAP1-204ENST00000562303 C8orf58Q8NAV2 365 aa12.65□□□□□ -0.38
RPAP1-204ENST00000562303 LEO1Q8WVC0 666 aaPredicted RBP12.65□□□□□ -0.38
RPAP1-204ENST00000562303 TRIM6Q9C030 488 aaPredicted RBP12.65□□□□□ -0.38
RPAP1-204ENST00000562303 FANCAO15360 1455 aa12.65□□□□□ -0.38
RPAP1-204ENST00000562303 IQGAP2Q13576 1575 aa12.65□□□□□ -0.38
RPAP1-204ENST00000562303 CCDC160A6NGH7 325 aa12.65□□□□□ -0.38
RPAP1-204ENST00000562303 GMNNO75496 209 aa12.65□□□□□ -0.38
RPAP1-204ENST00000562303 TRPC3Q13507 836 aa12.65□□□□□ -0.38
RPAP1-204ENST00000562303 ANKS4BQ8N8V4 417 aa12.65□□□□□ -0.38
RPAP1-204ENST00000562303 IFT74Q96LB3 600 aa12.65□□□□□ -0.38
RPAP1-204ENST00000562303 KCNK9Q9NPC2 374 aa12.65□□□□□ -0.38
RPAP1-204ENST00000562303 CCNL1Q9UK58 526 aaPredicted RBP12.65□□□□□ -0.38
RPAP1-204ENST00000562303 E7EVH7 732 aa12.65□□□□□ -0.38
RPAP1-204ENST00000562303 ALDH3A1P30838 453 aa12.65□□□□□ -0.38
RPAP1-204ENST00000562303 HDAC1Q13547 482 aaPredicted RBP12.65□□□□□ -0.38
RPAP1-204ENST00000562303 EIF4A2Q14240 407 aaKnown RBP12.65□□□□□ -0.38
RPAP1-204ENST00000562303 ZYXQ15942 572 aaKnown RBP12.65□□□□□ -0.38
RPAP1-204ENST00000562303 GEN1Q17RS7 908 aa12.65□□□□□ -0.38
RPAP1-204ENST00000562303 MTHFSDQ2M296 383 aaKnown RBP12.65□□□□□ -0.38
RPAP1-204ENST00000562303 MSL1Q68DK7 614 aa12.65□□□□□ -0.38
RPAP1-204ENST00000562303 PPP1R21Q6ZMI0 780 aa12.65□□□□□ -0.38
RPAP1-204ENST00000562303 IQUBQ8NA54 791 aa12.65□□□□□ -0.38
RPAP1-204ENST00000562303 DCAF5Q96JK2 942 aa12.65□□□□□ -0.38
RPAP1-204ENST00000562303 ZNF830Q96NB3 372 aaPredicted RBP12.65□□□□□ -0.38
RPAP1-204ENST00000562303 PFDN4Q9NQP4 134 aa12.65□□□□□ -0.38
RPAP1-204ENST00000562303 TTC41PQ6P2S7 1318 aa12.65□□□□□ -0.38
RPAP1-204ENST00000562303 PCDH11XQ9BZA7 1347 aa12.65□□□□□ -0.38
RPAP1-204ENST00000562303 PCDH11YQ9BZA8 1340 aa12.65□□□□□ -0.38
RPAP1-204ENST00000562303 STRN3Q13033 797 aa12.65□□□□□ -0.39
RPAP1-204ENST00000562303 DAAM2Q86T65 1068 aa12.65□□□□□ -0.39
RPAP1-204ENST00000562303 MRPL50Q8N5N7 158 aaKnown RBP12.65□□□□□ -0.39
RPAP1-204ENST00000562303 IFT81Q8WYA0 676 aa12.65□□□□□ -0.39
RPAP1-204ENST00000562303 FAM204AQ9H8W3 233 aa12.65□□□□□ -0.39
RPAP1-204ENST00000562303 DAPK3O43293 454 aa12.64□□□□□ -0.39
RPAP1-204ENST00000562303 LPXNO60711 386 aa12.64□□□□□ -0.39
RPAP1-204ENST00000562303 CALCOCO2Q13137 446 aa12.64□□□□□ -0.39
RPAP1-204ENST00000562303 JAKMIP2Q96AA8 810 aa12.64□□□□□ -0.39
RPAP1-204ENST00000562303 TLDC2A0PJX2 215 aa12.64□□□□□ -0.39
RPAP1-204ENST00000562303 MYCLP12524 364 aaPredicted RBP12.64□□□□□ -0.39
RPAP1-204ENST00000562303 PRKG1Q13976 671 aa12.64□□□□□ -0.39
RPAP1-204ENST00000562303 FMNL3Q8IVF7 1028 aa12.64□□□□□ -0.39
RPAP1-204ENST00000562303 TRIM7Q9C029 511 aa12.64□□□□□ -0.39
RPAP1-204ENST00000562303 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.64□□□□□ -0.39
RPAP1-204ENST00000562303 V9GYY5 206 aaPredicted RBP12.64□□□□□ -0.39
RPAP1-204ENST00000562303 PTPDC1A2A3K4 754 aa12.64□□□□□ -0.39
RPAP1-204ENST00000562303 ZNF174Q15697 407 aa12.64□□□□□ -0.39
RPAP1-204ENST00000562303 NACA2Q9H009 215 aa12.64□□□□□ -0.39
RPAP1-204ENST00000562303 TRAF5O00463 557 aa12.64□□□□□ -0.39
RPAP1-204ENST00000562303 TBC1D32Q96NH3 1257 aa12.64□□□□□ -0.39
RPAP1-204ENST00000562303 CC2D2AQ9P2K1 1620 aa12.64□□□□□ -0.39
RPAP1-204ENST00000562303 UAP1Q16222 522 aaPredicted RBP12.64□□□□□ -0.39
RPAP1-204ENST00000562303 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.64□□□□□ -0.39
RPAP1-204ENST00000562303 VWA3AA6NCI4 1184 aa12.63□□□□□ -0.39
RPAP1-204ENST00000562303 HIBADHP31937 336 aaKnown RBP12.63□□□□□ -0.39
RPAP1-204ENST00000562303 CREB3L3Q68CJ9 461 aa12.63□□□□□ -0.39
RPAP1-204ENST00000562303 BTG4Q9NY30 223 aa12.63□□□□□ -0.39
RPAP1-204ENST00000562303 GGA1Q9UJY5 639 aa12.63□□□□□ -0.39
RPAP1-204ENST00000562303 DISP3Q9P2K9 1392 aa12.63□□□□□ -0.39
RPAP1-204ENST00000562303 PKNOX2Q96KN3 472 aa12.63□□□□□ -0.39
RPAP1-204ENST00000562303 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.63□□□□□ -0.39
RPAP1-204ENST00000562303 LMTK3Q96Q04 1460 aa12.63□□□□□ -0.39
RPAP1-204ENST00000562303 PRXQ9BXM0 1461 aa12.63□□□□□ -0.39
RPAP1-204ENST00000562303 KARSQ15046 597 aaKnown RBP12.63□□□□□ -0.39
RPAP1-204ENST00000562303 DHX32Q7L7V1 743 aaKnown RBP12.63□□□□□ -0.39
RPAP1-204ENST00000562303 LUC7L2Q9Y383 392 aaKnown RBP12.63□□□□□ -0.39
RPAP1-204ENST00000562303 BRAPQ7Z569 592 aa12.63□□□□□ -0.39
RPAP1-204ENST00000562303 LARGE2Q8N3Y3 721 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms