RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 FRAT2O75474 233 aaPredicted RBP16.44■□□□□ 0.22
CDH1-204ENST00000562118 CYP2E1P05181 493 aaPredicted RBP16.44■□□□□ 0.22
CDH1-204ENST00000562118 SPDYE6P0CI01 402 aa16.44■□□□□ 0.22
CDH1-204ENST00000562118 ATP5JP18859 108 aa16.44■□□□□ 0.22
CDH1-204ENST00000562118 TBC1D10BQ4KMP7 808 aaPredicted RBP16.44■□□□□ 0.22
CDH1-204ENST00000562118 TTC39AQ5SRH9 613 aa16.44■□□□□ 0.22
CDH1-204ENST00000562118 GORABQ5T7V8 394 aa16.44■□□□□ 0.22
CDH1-204ENST00000562118 HHIPL2Q6UWX4 724 aa16.44■□□□□ 0.22
CDH1-204ENST00000562118 FAM163AQ96GL9 167 aaPredicted RBP16.44■□□□□ 0.22
CDH1-204ENST00000562118 ZDHHC15Q96MV8 337 aa16.44■□□□□ 0.22
CDH1-204ENST00000562118 TTF2Q9UNY4 1162 aaKnown RBP16.44■□□□□ 0.22
CDH1-204ENST00000562118 RFX7Q2KHR2 1363 aa16.43■□□□□ 0.22
CDH1-204ENST00000562118 APBB1O00213 710 aa16.43■□□□□ 0.22
CDH1-204ENST00000562118 IFIT2P09913 472 aaKnown RBP16.43■□□□□ 0.22
CDH1-204ENST00000562118 TMED8Q6PL24 325 aaPredicted RBP16.43■□□□□ 0.22
CDH1-204ENST00000562118 C16orf71Q8IYS4 520 aaPredicted RBP16.43■□□□□ 0.22
CDH1-204ENST00000562118 CRKP46108 304 aa16.42■□□□□ 0.22
CDH1-204ENST00000562118 C1QTNF8P60827 252 aa16.42■□□□□ 0.22
CDH1-204ENST00000562118 NUCB1Q02818 461 aa16.42■□□□□ 0.22
CDH1-204ENST00000562118 NBPF9Q3BBW0 867 aa16.42■□□□□ 0.22
CDH1-204ENST00000562118 CFAP100Q494V2 611 aa16.42■□□□□ 0.22
CDH1-204ENST00000562118 EAPPQ56P03 285 aaPredicted RBP16.42■□□□□ 0.22
CDH1-204ENST00000562118 AOX1Q06278 1338 aa16.42■□□□□ 0.22
CDH1-204ENST00000562118 TTC41PQ6P2S7 1318 aa16.42■□□□□ 0.22
CDH1-204ENST00000562118 PAPPA2Q9BXP8 1791 aa16.41■□□□□ 0.22
CDH1-204ENST00000562118 LDHBP07195 334 aaKnown RBP16.41■□□□□ 0.22
CDH1-204ENST00000562118 ZAP70P43403 619 aa16.41■□□□□ 0.22
CDH1-204ENST00000562118 SPTY2D1Q68D10 685 aaPredicted RBP16.41■□□□□ 0.22
CDH1-204ENST00000562118 APOBEC3HQ6NTF7 200 aaKnown RBP16.41■□□□□ 0.22
CDH1-204ENST00000562118 NSUN4Q96CB9 384 aaKnown RBP16.41■□□□□ 0.22
CDH1-204ENST00000562118 PRMT6Q96LA8 375 aaPredicted RBP16.41■□□□□ 0.22
CDH1-204ENST00000562118 HAUS7Q99871 368 aa16.41■□□□□ 0.22
CDH1-204ENST00000562118 STAP2Q9UGK3 403 aa16.41■□□□□ 0.22
CDH1-204ENST00000562118 PCDHAC2Q9Y5I4 1007 aa16.41■□□□□ 0.22
CDH1-204ENST00000562118 ASTN2O75129 1339 aaPredicted RBP16.41■□□□□ 0.22
CDH1-204ENST00000562118 SPDYE2Q495Y8 402 aa16.4■□□□□ 0.22
CDH1-204ENST00000562118 PI4K2BQ8TCG2 481 aa16.4■□□□□ 0.22
CDH1-204ENST00000562118 TEKT1Q969V4 418 aa16.4■□□□□ 0.22
CDH1-204ENST00000562118 ECHDC1Q9NTX5 307 aa16.4■□□□□ 0.22
CDH1-204ENST00000562118 GGA3Q9NZ52 723 aa16.4■□□□□ 0.22
CDH1-204ENST00000562118 F8W031 263 aaPredicted RBP16.39■□□□□ 0.21
CDH1-204ENST00000562118 MECOMQ03112 1051 aa16.39■□□□□ 0.21
CDH1-204ENST00000562118 DLGAP5Q15398 846 aa16.39■□□□□ 0.21
CDH1-204ENST00000562118 MAP1SQ66K74 1059 aaPredicted RBP16.39■□□□□ 0.21
CDH1-204ENST00000562118 CNTROBQ8N137 903 aa16.39■□□□□ 0.21
CDH1-204ENST00000562118 PIH1D3Q9NQM4 214 aaKnown RBP16.39■□□□□ 0.21
CDH1-204ENST00000562118 DAGLAQ9Y4D2 1042 aa16.39■□□□□ 0.21
CDH1-204ENST00000562118 CEP350Q5VT06 3117 aa16.39■□□□□ 0.21
CDH1-204ENST00000562118 DDX60LQ5H9U9 1706 aaKnown RBP16.39■□□□□ 0.21
CDH1-204ENST00000562118 ANKRD45Q5TZF3 282 aa16.38■□□□□ 0.21
CDH1-204ENST00000562118 ANGEL2Q5VTE6 544 aaKnown RBP16.38■□□□□ 0.21
CDH1-204ENST00000562118 FKBP1CQ5VVH2 108 aa16.38■□□□□ 0.21
CDH1-204ENST00000562118 ERICH6BQ5W0A0 696 aa16.38■□□□□ 0.21
CDH1-204ENST00000562118 TBC1D9Q6ZT07 1266 aa16.38■□□□□ 0.21
CDH1-204ENST00000562118 ERICH6Q7L0X2 663 aa16.38■□□□□ 0.21
CDH1-204ENST00000562118 CHD1LQ86WJ1 897 aa16.38■□□□□ 0.21
CDH1-204ENST00000562118 OTUD7AQ8TE49 926 aaPredicted RBP16.38■□□□□ 0.21
CDH1-204ENST00000562118 SNRKQ9NRH2 765 aa16.38■□□□□ 0.21
CDH1-204ENST00000562118 MROH7-TTC4A0A0A0MT08 1334 aa16.38■□□□□ 0.21
CDH1-204ENST00000562118 RPAP1Q9BWH6 1393 aaPredicted RBP16.38■□□□□ 0.21
CDH1-204ENST00000562118 GPR75-ASB3A0A0A6YYF3 556 aa16.37■□□□□ 0.21
CDH1-204ENST00000562118 MX1P20591 662 aa16.37■□□□□ 0.21
CDH1-204ENST00000562118 TTF1Q15361 905 aaPredicted RBP16.37■□□□□ 0.21
CDH1-204ENST00000562118 DIXDC1Q155Q3 683 aa16.37■□□□□ 0.21
CDH1-204ENST00000562118 RBM26Q5T8P6 1007 aaKnown RBP16.37■□□□□ 0.21
CDH1-204ENST00000562118 CDC37L1Q7L3B6 337 aa16.37■□□□□ 0.21
CDH1-204ENST00000562118 OSBPL3Q9H4L5 887 aa16.37■□□□□ 0.21
CDH1-204ENST00000562118 ANTXR1Q9H6X2 564 aa16.37■□□□□ 0.21
CDH1-204ENST00000562118 LAMB1P07942 1786 aa16.36■□□□□ 0.21
CDH1-204ENST00000562118 SSC5DA1L4H1 1573 aa16.36■□□□□ 0.21
CDH1-204ENST00000562118 MAP4K4O95819 1239 aaPredicted RBP16.36■□□□□ 0.21
CDH1-204ENST00000562118 APOBEC3FQ8IUX4 373 aaKnown RBP16.36■□□□□ 0.21
CDH1-204ENST00000562118 ABCF2Q9UG63 623 aa16.36■□□□□ 0.21
CDH1-204ENST00000562118 PPP2R3BQ9Y5P8 575 aa16.36■□□□□ 0.21
CDH1-204ENST00000562118 NDUFB9Q9Y6M9 179 aa16.36■□□□□ 0.21
CDH1-204ENST00000562118 COL2A1P02458 1487 aaPredicted RBP16.35■□□□□ 0.21
CDH1-204ENST00000562118 PDE1AP54750 535 aa16.35■□□□□ 0.21
CDH1-204ENST00000562118 GSTO1P78417 241 aa16.35■□□□□ 0.21
CDH1-204ENST00000562118 DZIP1Q86YF9 867 aaKnown RBP16.35■□□□□ 0.21
CDH1-204ENST00000562118 SLF2Q8IX21 1173 aa16.35■□□□□ 0.21
CDH1-204ENST00000562118 DCPSQ96C86 337 aaKnown RBP16.35■□□□□ 0.21
CDH1-204ENST00000562118 GPATCH3Q96I76 525 aa16.35■□□□□ 0.21
CDH1-204ENST00000562118 GLIS2Q9BZE0 524 aaPredicted RBP16.35■□□□□ 0.21
CDH1-204ENST00000562118 PAG1Q9NWQ8 432 aa16.35■□□□□ 0.21
CDH1-204ENST00000562118 ZNF70Q9UC06 446 aaPredicted RBP16.35■□□□□ 0.21
CDH1-204ENST00000562118 CLEC11AQ9Y240 323 aa16.35■□□□□ 0.21
CDH1-204ENST00000562118 CNTNAP1P78357 1384 aa16.35■□□□□ 0.21
CDH1-204ENST00000562118 TCRBV5S4A2TA0A5A2 114 aa16.34■□□□□ 0.21
CDH1-204ENST00000562118 MYO1BO43795 1136 aa16.34■□□□□ 0.21
CDH1-204ENST00000562118 NPM3O75607 178 aaKnown RBP16.34■□□□□ 0.21
CDH1-204ENST00000562118 GLRX3O76003 335 aaKnown RBP16.34■□□□□ 0.21
CDH1-204ENST00000562118 RHBDL3P58872 404 aa16.34■□□□□ 0.21
CDH1-204ENST00000562118 PPP4CP60510 307 aa16.34■□□□□ 0.21
CDH1-204ENST00000562118 KRT26Q7Z3Y9 468 aa16.34■□□□□ 0.21
CDH1-204ENST00000562118 ADGRA1Q86SQ6 560 aa16.34■□□□□ 0.21
CDH1-204ENST00000562118 FAM83AQ86UY5 434 aa16.34■□□□□ 0.21
CDH1-204ENST00000562118 IDI2Q9BXS1 227 aa16.34■□□□□ 0.21
CDH1-204ENST00000562118 LNPKQ9C0E8 428 aa16.34■□□□□ 0.21
CDH1-204ENST00000562118 BOLA2Q9H3K6 86 aa16.34■□□□□ 0.21
CDH1-204ENST00000562118 LRP2BPQ9P2M1 347 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms