RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 BEND3Q5T5X7 828 aa14.85□□□□□ -0.03
NSMCE1-202ENST00000561960 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.85□□□□□ -0.03
NSMCE1-202ENST00000561960 ANKRD13AQ8IZ07 590 aa14.85□□□□□ -0.03
NSMCE1-202ENST00000561960 SPINK5Q9NQ38 1064 aaPredicted RBP14.85□□□□□ -0.03
NSMCE1-202ENST00000561960 PPP2R3BQ9Y5P8 575 aa14.85□□□□□ -0.03
NSMCE1-202ENST00000561960 INHBEP58166 350 aa14.84□□□□□ -0.03
NSMCE1-202ENST00000561960 CCDC57Q2TAC2 916 aa14.84□□□□□ -0.03
NSMCE1-202ENST00000561960 SPDYE2Q495Y8 402 aa14.84□□□□□ -0.03
NSMCE1-202ENST00000561960 DZIP1LQ8IYY4 767 aaKnown RBP14.84□□□□□ -0.03
NSMCE1-202ENST00000561960 SUCLG2Q96I99 432 aa14.84□□□□□ -0.03
NSMCE1-202ENST00000561960 MS4A4AQ96JQ5 239 aa14.84□□□□□ -0.03
NSMCE1-202ENST00000561960 TEPSINQ96N21 525 aa14.84□□□□□ -0.03
NSMCE1-202ENST00000561960 VAMP4O75379 141 aa14.83□□□□□ -0.04
NSMCE1-202ENST00000561960 CRKP46108 304 aa14.83□□□□□ -0.04
NSMCE1-202ENST00000561960 SLC4A8Q2Y0W8 1093 aa14.83□□□□□ -0.04
NSMCE1-202ENST00000561960 SLC9C1Q4G0N8 1177 aa14.83□□□□□ -0.04
NSMCE1-202ENST00000561960 C15orf52Q6ZUT6 534 aaKnown RBP14.83□□□□□ -0.04
NSMCE1-202ENST00000561960 ZKSCAN4Q969J2 545 aaPredicted RBP14.83□□□□□ -0.04
NSMCE1-202ENST00000561960 MGAMO43451 1857 aa14.82□□□□□ -0.04
NSMCE1-202ENST00000561960 GRM8O00222 908 aa14.82□□□□□ -0.04
NSMCE1-202ENST00000561960 OTUD7BQ6GQQ9 843 aa14.82□□□□□ -0.04
NSMCE1-202ENST00000561960 KLHDC4Q8TBB5 520 aa14.82□□□□□ -0.04
NSMCE1-202ENST00000561960 ZNF333Q96JL9 665 aa14.82□□□□□ -0.04
NSMCE1-202ENST00000561960 FAM84BQ96KN1 310 aaPredicted RBP14.82□□□□□ -0.04
NSMCE1-202ENST00000561960 CHMP4AQ9BY43 222 aa14.82□□□□□ -0.04
NSMCE1-202ENST00000561960 C9orf78Q9NZ63 289 aaPredicted RBP14.82□□□□□ -0.04
NSMCE1-202ENST00000561960 COLQQ9Y215 455 aaPredicted RBP14.82□□□□□ -0.04
NSMCE1-202ENST00000561960 HIBADHP31937 336 aaKnown RBP14.81□□□□□ -0.04
NSMCE1-202ENST00000561960 FXR1P51114 621 aaKnown RBP eCLIP14.81□□□□□ -0.04
NSMCE1-202ENST00000561960 LRRC24Q50LG9 513 aa14.81□□□□□ -0.04
NSMCE1-202ENST00000561960 INTS3Q68E01 1043 aaKnown RBP14.81□□□□□ -0.04
NSMCE1-202ENST00000561960 TDRD7Q8NHU6 1098 aaKnown RBP14.81□□□□□ -0.04
NSMCE1-202ENST00000561960 ARMC5Q96C12 935 aa14.81□□□□□ -0.04
NSMCE1-202ENST00000561960 TMEM106CQ9BVX2 250 aa14.81□□□□□ -0.04
NSMCE1-202ENST00000561960 TESPA1A2RU30 521 aaPredicted RBP14.8□□□□□ -0.04
NSMCE1-202ENST00000561960 FRAT2O75474 233 aaPredicted RBP14.8□□□□□ -0.04
NSMCE1-202ENST00000561960 MMP14P50281 582 aa14.8□□□□□ -0.04
NSMCE1-202ENST00000561960 GCC1Q96CN9 775 aa14.8□□□□□ -0.04
NSMCE1-202ENST00000561960 SNCAIPQ9Y6H5 919 aa14.8□□□□□ -0.04
NSMCE1-202ENST00000561960 FAM205AQ6ZU69 1335 aa14.8□□□□□ -0.04
NSMCE1-202ENST00000561960 NBPF7P0C2Y1 421 aaPredicted RBP14.79□□□□□ -0.04
NSMCE1-202ENST00000561960 COL6A3P12111 3177 aa14.79□□□□□ -0.04
NSMCE1-202ENST00000561960 FKBP1AP62942 108 aaKnown RBP14.79□□□□□ -0.04
NSMCE1-202ENST00000561960 MAP3K9P80192 1104 aa14.79□□□□□ -0.04
NSMCE1-202ENST00000561960 CCDC27Q2M243 656 aa14.79□□□□□ -0.04
NSMCE1-202ENST00000561960 MIGA2Q7L4E1 593 aa14.79□□□□□ -0.04
NSMCE1-202ENST00000561960 VPS37DQ86XT2 251 aa14.79□□□□□ -0.04
NSMCE1-202ENST00000561960 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.79□□□□□ -0.04
NSMCE1-202ENST00000561960 KAZALD1Q96I82 304 aa14.79□□□□□ -0.04
NSMCE1-202ENST00000561960 WRNIP1Q96S55 665 aa14.79□□□□□ -0.04
NSMCE1-202ENST00000561960 BICC1Q9H694 974 aaKnown RBP14.79□□□□□ -0.04
NSMCE1-202ENST00000561960 ZFYVE28Q9HCC9 887 aa14.79□□□□□ -0.04
NSMCE1-202ENST00000561960 SERPINA10Q9UK55 444 aa14.79□□□□□ -0.04
NSMCE1-202ENST00000561960 CSADQ9Y600 493 aa14.79□□□□□ -0.04
NSMCE1-202ENST00000561960 BTBD19C9JJ37 291 aa14.78□□□□□ -0.04
NSMCE1-202ENST00000561960 H0YGN5 161 aa14.78□□□□□ -0.04
NSMCE1-202ENST00000561960 CTGFP29279 349 aa14.78□□□□□ -0.04
NSMCE1-202ENST00000561960 BCAMP50895 628 aa14.78□□□□□ -0.04
NSMCE1-202ENST00000561960 TNFAIP1Q13829 316 aa14.78□□□□□ -0.04
NSMCE1-202ENST00000561960 MTFR1Q15390 333 aa14.78□□□□□ -0.04
NSMCE1-202ENST00000561960 MRS2Q9HD23 443 aa14.78□□□□□ -0.04
NSMCE1-202ENST00000561960 CPA4Q9UI42 421 aa14.78□□□□□ -0.04
NSMCE1-202ENST00000561960 IL16Q14005 1332 aa14.77□□□□□ -0.04
NSMCE1-202ENST00000561960 IRF6O14896 467 aa14.77□□□□□ -0.05
NSMCE1-202ENST00000561960 GTF2A2P52657 109 aa14.77□□□□□ -0.05
NSMCE1-202ENST00000561960 METTL24Q5JXM2 366 aa14.77□□□□□ -0.05
NSMCE1-202ENST00000561960 DOCK2Q92608 1830 aa14.77□□□□□ -0.05
NSMCE1-202ENST00000561960 LAMA3Q16787 3333 aa14.76□□□□□ -0.05
NSMCE1-202ENST00000561960 INPP5BP32019 993 aa14.76□□□□□ -0.05
NSMCE1-202ENST00000561960 TNNI2P48788 182 aa14.76□□□□□ -0.05
NSMCE1-202ENST00000561960 TCP10Q12799 353 aa14.76□□□□□ -0.05
NSMCE1-202ENST00000561960 UBE4AQ14139 1066 aa14.76□□□□□ -0.05
NSMCE1-202ENST00000561960 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.76□□□□□ -0.05
NSMCE1-202ENST00000561960 MYH2Q9UKX2 1941 aa14.76□□□□□ -0.05
NSMCE1-202ENST00000561960 SLURP2P0DP57 97 aa14.75□□□□□ -0.05
NSMCE1-202ENST00000561960 LACTBP83111 547 aaPredicted RBP14.75□□□□□ -0.05
NSMCE1-202ENST00000561960 CHRDL2Q6WN34 429 aa14.75□□□□□ -0.05
NSMCE1-202ENST00000561960 SRCIN1Q9C0H9 1055 aa14.75□□□□□ -0.05
NSMCE1-202ENST00000561960 RIPOR2Q9Y4F9 1068 aa14.75□□□□□ -0.05
NSMCE1-202ENST00000561960 SPDYE5A6NIY4 337 aa14.74□□□□□ -0.05
NSMCE1-202ENST00000561960 FBXO33Q7Z6M2 555 aa14.74□□□□□ -0.05
NSMCE1-202ENST00000561960 NBPF11Q86T75 865 aa14.74□□□□□ -0.05
NSMCE1-202ENST00000561960 ANKRD44Q8N8A2 993 aa14.74□□□□□ -0.05
NSMCE1-202ENST00000561960 TEKT1Q969V4 418 aa14.74□□□□□ -0.05
NSMCE1-202ENST00000561960 SHISA4Q96DD7 197 aa14.74□□□□□ -0.05
NSMCE1-202ENST00000561960 DOCK3Q8IZD9 2030 aa14.74□□□□□ -0.05
NSMCE1-202ENST00000561960 PTPRFP10586 1907 aa14.74□□□□□ -0.05
NSMCE1-202ENST00000561960 ALPK3Q96L96 1907 aa14.74□□□□□ -0.05
NSMCE1-202ENST00000561960 UNCXA6NJT0 531 aa14.73□□□□□ -0.05
NSMCE1-202ENST00000561960 TLR2O60603 784 aa14.73□□□□□ -0.05
NSMCE1-202ENST00000561960 CETPP11597 493 aa14.73□□□□□ -0.05
NSMCE1-202ENST00000561960 DIXDC1Q155Q3 683 aa14.73□□□□□ -0.05
NSMCE1-202ENST00000561960 TRIM47Q96LD4 638 aa14.73□□□□□ -0.05
NSMCE1-202ENST00000561960 MROH5Q6ZUA9 1318 aa14.72□□□□□ -0.05
NSMCE1-202ENST00000561960 SNAPC2Q13487 334 aa14.72□□□□□ -0.05
NSMCE1-202ENST00000561960 KIF22Q14807 665 aa14.72□□□□□ -0.05
NSMCE1-202ENST00000561960 APOBEC3HQ6NTF7 200 aaKnown RBP14.72□□□□□ -0.05
NSMCE1-202ENST00000561960 ERO1BQ86YB8 467 aa14.72□□□□□ -0.05
NSMCE1-202ENST00000561960 FAM9BQ8IZU0 186 aa14.72□□□□□ -0.05
NSMCE1-202ENST00000561960 DPF3Q92784 378 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms