RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 ZBED3Q96IU2 234 aaPredicted RBP10.33□□□□□ -0.76
GINS3-204ENST00000561952 PRMT6Q96LA8 375 aaPredicted RBP10.33□□□□□ -0.76
GINS3-204ENST00000561952 DEFB129Q9H1M3 183 aa10.33□□□□□ -0.76
GINS3-204ENST00000561952 RNF186Q9NXI6 227 aa10.33□□□□□ -0.76
GINS3-204ENST00000561952 ANGEL1Q9UNK9 670 aaKnown RBP10.33□□□□□ -0.76
GINS3-204ENST00000561952 OTOFQ9HC10 1997 aa10.33□□□□□ -0.76
GINS3-204ENST00000561952 SSC5DA1L4H1 1573 aa10.32□□□□□ -0.76
GINS3-204ENST00000561952 CCDC85CA6NKD9 419 aa10.32□□□□□ -0.76
GINS3-204ENST00000561952 BCAMP50895 628 aa10.32□□□□□ -0.76
GINS3-204ENST00000561952 PTPN12Q05209 780 aaKnown RBP10.32□□□□□ -0.76
GINS3-204ENST00000561952 DGKZQ13574 1117 aa10.32□□□□□ -0.76
GINS3-204ENST00000561952 GRIK5Q16478 980 aa10.32□□□□□ -0.76
GINS3-204ENST00000561952 CAVIN4Q5BKX8 364 aa10.32□□□□□ -0.76
GINS3-204ENST00000561952 MAMSTRQ6ZN01 415 aa10.32□□□□□ -0.76
GINS3-204ENST00000561952 ARMC9Q7Z3E5 817 aa10.32□□□□□ -0.76
GINS3-204ENST00000561952 TRMT2AQ8IZ69 625 aaKnown RBP10.32□□□□□ -0.76
GINS3-204ENST00000561952 TDRD7Q8NHU6 1098 aaKnown RBP10.32□□□□□ -0.76
GINS3-204ENST00000561952 SLC39A7Q92504 469 aa10.32□□□□□ -0.76
GINS3-204ENST00000561952 CSRNP1Q96S65 589 aa10.32□□□□□ -0.76
GINS3-204ENST00000561952 LRRFIP2Q9Y608 721 aaKnown RBP10.32□□□□□ -0.76
GINS3-204ENST00000561952 FAM205AQ6ZU69 1335 aa10.32□□□□□ -0.76
GINS3-204ENST00000561952 COL1A1P02452 1464 aaPredicted RBP10.31□□□□□ -0.76
GINS3-204ENST00000561952 PDE8BO95263 885 aa10.31□□□□□ -0.76
GINS3-204ENST00000561952 MMP14P50281 582 aa10.31□□□□□ -0.76
GINS3-204ENST00000561952 RARSP54136 660 aaKnown RBP10.31□□□□□ -0.76
GINS3-204ENST00000561952 FKBP1AP62942 108 aaKnown RBP10.31□□□□□ -0.76
GINS3-204ENST00000561952 ASTLQ6HA08 431 aaPredicted RBP10.31□□□□□ -0.76
GINS3-204ENST00000561952 VGLL2Q8N8G2 317 aa10.31□□□□□ -0.76
GINS3-204ENST00000561952 FRAT1Q92837 279 aaPredicted RBP10.31□□□□□ -0.76
GINS3-204ENST00000561952 MEIS3Q99687 375 aa10.31□□□□□ -0.76
GINS3-204ENST00000561952 API5Q9BZZ5 524 aaKnown RBP10.31□□□□□ -0.76
GINS3-204ENST00000561952 MCOLN1Q9GZU1 580 aa10.31□□□□□ -0.76
GINS3-204ENST00000561952 TDRD3Q9H7E2 651 aaKnown RBP10.31□□□□□ -0.76
GINS3-204ENST00000561952 PA2G4Q9UQ80 394 aaKnown RBP10.31□□□□□ -0.76
GINS3-204ENST00000561952 TNNQ9UQP3 1299 aa10.31□□□□□ -0.76
GINS3-204ENST00000561952 TCP10L2B9ZVM9 353 aa10.3□□□□□ -0.76
GINS3-204ENST00000561952 EYA2O00167 538 aa10.3□□□□□ -0.76
GINS3-204ENST00000561952 IFIT1P09914 478 aaKnown RBP10.3□□□□□ -0.76
GINS3-204ENST00000561952 CT47B1P0C2W7 299 aaPredicted RBP10.3□□□□□ -0.76
GINS3-204ENST00000561952 SLC5A1P13866 664 aa10.3□□□□□ -0.76
GINS3-204ENST00000561952 CRKP46108 304 aa10.3□□□□□ -0.76
GINS3-204ENST00000561952 RFX5P48382 616 aaPredicted RBP10.3□□□□□ -0.76
GINS3-204ENST00000561952 MNX1P50219 401 aaPredicted RBP10.3□□□□□ -0.76
GINS3-204ENST00000561952 CACNB3P54284 484 aa10.3□□□□□ -0.76
GINS3-204ENST00000561952 RASA3Q14644 834 aa10.3□□□□□ -0.76
GINS3-204ENST00000561952 PUM3Q15397 648 aaKnown RBP10.3□□□□□ -0.76
GINS3-204ENST00000561952 NBPF12Q5TAG4 269 aaPredicted RBP10.3□□□□□ -0.76
GINS3-204ENST00000561952 FBXO33Q7Z6M2 555 aa10.3□□□□□ -0.76
GINS3-204ENST00000561952 MIER1Q8N108 512 aa10.3□□□□□ -0.76
GINS3-204ENST00000561952 MTMR14Q8NCE2 650 aa10.3□□□□□ -0.76
GINS3-204ENST00000561952 CLMNQ96JQ2 1002 aa10.3□□□□□ -0.76
GINS3-204ENST00000561952 ZNF70Q9UC06 446 aaPredicted RBP10.3□□□□□ -0.76
GINS3-204ENST00000561952 METRNQ9UJH8 293 aa10.3□□□□□ -0.76
GINS3-204ENST00000561952 AK9Q5TCS8 1911 aa10.3□□□□□ -0.76
GINS3-204ENST00000561952 KIF16BQ96L93 1317 aa10.3□□□□□ -0.76
GINS3-204ENST00000561952 TBC1D8O95759 1140 aa10.29□□□□□ -0.76
GINS3-204ENST00000561952 HNRNPUQ00839 825 aaKnown RBP eCLIP10.29□□□□□ -0.76
GINS3-204ENST00000561952 CDAN1Q8IWY9 1227 aa10.29□□□□□ -0.76
GINS3-204ENST00000561952 DZIP1LQ8IYY4 767 aaKnown RBP10.29□□□□□ -0.76
GINS3-204ENST00000561952 CLUAP1Q96AJ1 413 aa10.29□□□□□ -0.76
GINS3-204ENST00000561952 SAGE1Q9NXZ1 904 aa10.29□□□□□ -0.76
GINS3-204ENST00000561952 PPP1R12BO60237 982 aaPredicted RBP10.28□□□□□ -0.76
GINS3-204ENST00000561952 BCAR3O75815 825 aa10.28□□□□□ -0.76
GINS3-204ENST00000561952 FGFR2P21802 821 aa10.28□□□□□ -0.76
GINS3-204ENST00000561952 ATP2B3Q16720 1220 aa10.28□□□□□ -0.76
GINS3-204ENST00000561952 DIEXFQ68CQ4 756 aaKnown RBP10.28□□□□□ -0.76
GINS3-204ENST00000561952 ATG9AQ7Z3C6 839 aa10.28□□□□□ -0.76
GINS3-204ENST00000561952 LPIN2Q92539 896 aa10.28□□□□□ -0.76
GINS3-204ENST00000561952 SLC10A4Q96EP9 437 aa10.28□□□□□ -0.76
GINS3-204ENST00000561952 TMEM39BQ9GZU3 492 aa10.28□□□□□ -0.76
GINS3-204ENST00000561952 SERPINA10Q9UK55 444 aa10.28□□□□□ -0.76
GINS3-204ENST00000561952 PPP2R3BQ9Y5P8 575 aa10.28□□□□□ -0.76
GINS3-204ENST00000561952 ATMINO43313 823 aaPredicted RBP10.27□□□□□ -0.77
GINS3-204ENST00000561952 IREB2P48200 963 aaKnown RBP10.27□□□□□ -0.77
GINS3-204ENST00000561952 TNFAIP1Q13829 316 aa10.27□□□□□ -0.77
GINS3-204ENST00000561952 SUPT20HL1Q3ZLR7 823 aa10.27□□□□□ -0.77
GINS3-204ENST00000561952 TBC1D22AQ8WUA7 517 aa10.27□□□□□ -0.77
GINS3-204ENST00000561952 TEKT1Q969V4 418 aa10.27□□□□□ -0.77
GINS3-204ENST00000561952 WNK4Q96J92 1243 aa10.27□□□□□ -0.77
GINS3-204ENST00000561952 ELP3Q9H9T3 547 aa10.27□□□□□ -0.77
GINS3-204ENST00000561952 CEP126Q9P2H0 1117 aa10.27□□□□□ -0.77
GINS3-204ENST00000561952 TRIM27P14373 513 aa10.26□□□□□ -0.77
GINS3-204ENST00000561952 ADORA1P30542 326 aa10.26□□□□□ -0.77
GINS3-204ENST00000561952 SREBF2Q12772 1141 aa10.26□□□□□ -0.77
GINS3-204ENST00000561952 LDLRAD1Q5T700 205 aa10.26□□□□□ -0.77
GINS3-204ENST00000561952 SPRYD7Q5W111 196 aa10.26□□□□□ -0.77
GINS3-204ENST00000561952 MS4A3Q96HJ5 214 aa10.26□□□□□ -0.77
GINS3-204ENST00000561952 TMOD2Q9NZR1 351 aa10.26□□□□□ -0.77
GINS3-204ENST00000561952 MYH2Q9UKX2 1941 aa10.26□□□□□ -0.77
GINS3-204ENST00000561952 SRGAP3O43295 1099 aa10.25□□□□□ -0.77
GINS3-204ENST00000561952 USP2O75604 605 aaPredicted RBP10.25□□□□□ -0.77
GINS3-204ENST00000561952 PRDX5P30044 214 aa10.25□□□□□ -0.77
GINS3-204ENST00000561952 GJA5P36382 358 aa10.25□□□□□ -0.77
GINS3-204ENST00000561952 PHKA1P46020 1223 aa10.25□□□□□ -0.77
GINS3-204ENST00000561952 TNNI2P48788 182 aa10.25□□□□□ -0.77
GINS3-204ENST00000561952 DIXDC1Q155Q3 683 aa10.25□□□□□ -0.77
GINS3-204ENST00000561952 ATF7IPQ6VMQ6 1270 aa10.25□□□□□ -0.77
GINS3-204ENST00000561952 ZNF296Q8WUU4 475 aaPredicted RBP10.25□□□□□ -0.77
GINS3-204ENST00000561952 R3HDMLQ9H3Y0 253 aa10.25□□□□□ -0.77
GINS3-204ENST00000561952 MAST3O60307 1309 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms