RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 CRKP46108 304 aa21.42■■□□□ 1.02
CDC42BPB-208ENST00000561271 TBC1D22AQ8WUA7 517 aa21.42■■□□□ 1.02
CDC42BPB-208ENST00000561271 SRGAP3O43295 1099 aa21.41■■□□□ 1.02
CDC42BPB-208ENST00000561271 IL15P40933 162 aaPredicted RBP21.41■■□□□ 1.02
CDC42BPB-208ENST00000561271 SPDYE2Q495Y8 402 aa21.41■■□□□ 1.02
CDC42BPB-208ENST00000561271 ZKSCAN2Q63HK3 967 aa21.41■■□□□ 1.02
CDC42BPB-208ENST00000561271 TMEM57Q8N5G2 664 aa21.41■■□□□ 1.02
CDC42BPB-208ENST00000561271 COPRSQ9NQ92 184 aa21.41■■□□□ 1.02
CDC42BPB-208ENST00000561271 CEP126Q9P2H0 1117 aa21.41■■□□□ 1.02
CDC42BPB-208ENST00000561271 ANGEL1Q9UNK9 670 aaKnown RBP21.41■■□□□ 1.02
CDC42BPB-208ENST00000561271 PPP2R3BQ9Y5P8 575 aa21.41■■□□□ 1.02
CDC42BPB-208ENST00000561271 DZIP1LQ8IYY4 767 aaKnown RBP21.4■■□□□ 1.02
CDC42BPB-208ENST00000561271 TDRD3Q9H7E2 651 aaKnown RBP21.4■■□□□ 1.02
CDC42BPB-208ENST00000561271 ZNF70Q9UC06 446 aaPredicted RBP21.4■■□□□ 1.02
CDC42BPB-208ENST00000561271 MTX1Q13505 466 aa21.39■■□□□ 1.01
CDC42BPB-208ENST00000561271 ARMC9Q7Z3E5 817 aa21.39■■□□□ 1.01
CDC42BPB-208ENST00000561271 CDK5RAP2Q96SN8 1893 aa21.39■■□□□ 1.01
CDC42BPB-208ENST00000561271 MAST2Q6P0Q8 1798 aa21.38■■□□□ 1.01
CDC42BPB-208ENST00000561271 MKRN3Q13064 507 aaKnown RBP21.38■■□□□ 1.01
CDC42BPB-208ENST00000561271 RASA3Q14644 834 aa21.38■■□□□ 1.01
CDC42BPB-208ENST00000561271 CSRNP1Q96S65 589 aa21.38■■□□□ 1.01
CDC42BPB-208ENST00000561271 GNAI2P04899 355 aa21.37■■□□□ 1.01
CDC42BPB-208ENST00000561271 ADORA1P30542 326 aa21.37■■□□□ 1.01
CDC42BPB-208ENST00000561271 NBPF12Q5TAG4 269 aaPredicted RBP21.37■■□□□ 1.01
CDC42BPB-208ENST00000561271 TEKT1Q969V4 418 aa21.37■■□□□ 1.01
CDC42BPB-208ENST00000561271 MAST3O60307 1309 aa21.36■■□□□ 1.01
CDC42BPB-208ENST00000561271 PHKA1P46020 1223 aa21.36■■□□□ 1.01
CDC42BPB-208ENST00000561271 TNFAIP1Q13829 316 aa21.36■■□□□ 1.01
CDC42BPB-208ENST00000561271 CDAN1Q8IWY9 1227 aa21.36■■□□□ 1.01
CDC42BPB-208ENST00000561271 RNF186Q9NXI6 227 aa21.36■■□□□ 1.01
CDC42BPB-208ENST00000561271 SAGE1Q9NXZ1 904 aa21.36■■□□□ 1.01
CDC42BPB-208ENST00000561271 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.36■■□□□ 1.01
CDC42BPB-208ENST00000561271 PNMA6EA0A0J9YXQ4 647 aa21.35■■□□□ 1.01
CDC42BPB-208ENST00000561271 TCP10L2B9ZVM9 353 aa21.35■■□□□ 1.01
CDC42BPB-208ENST00000561271 TRPA1O75762 1119 aa21.35■■□□□ 1.01
CDC42BPB-208ENST00000561271 CACNB3P54284 484 aa21.35■■□□□ 1.01
CDC42BPB-208ENST00000561271 HDLBPQ00341 1268 aaKnown RBP21.35■■□□□ 1.01
CDC42BPB-208ENST00000561271 LDLRAD1Q5T700 205 aa21.35■■□□□ 1.01
CDC42BPB-208ENST00000561271 FTSJ3Q8IY81 847 aaKnown RBP21.35■■□□□ 1.01
CDC42BPB-208ENST00000561271 WDR66Q8TBY9 1149 aa21.35■■□□□ 1.01
CDC42BPB-208ENST00000561271 PPP1R12BO60237 982 aaPredicted RBP21.34■■□□□ 1.01
CDC42BPB-208ENST00000561271 TFCP2Q12800 502 aa21.34■■□□□ 1.01
CDC42BPB-208ENST00000561271 SUPT20HL1Q3ZLR7 823 aa21.34■■□□□ 1.01
CDC42BPB-208ENST00000561271 CLMNQ96JQ2 1002 aa21.34■■□□□ 1.01
CDC42BPB-208ENST00000561271 GNL3LQ9NVN8 582 aaKnown RBP21.34■■□□□ 1.01
CDC42BPB-208ENST00000561271 SUGT1Q9Y2Z0 365 aa21.34■■□□□ 1.01
CDC42BPB-208ENST00000561271 RLBP1P12271 317 aa21.33■■□□□ 1.01
CDC42BPB-208ENST00000561271 MAP3K11Q16584 847 aa21.33■■□□□ 1.01
CDC42BPB-208ENST00000561271 ZDHHC15Q96MV8 337 aa21.33■■□□□ 1.01
CDC42BPB-208ENST00000561271 TMEM39BQ9GZU3 492 aa21.33■■□□□ 1.01
CDC42BPB-208ENST00000561271 C1orf115Q9H7X2 142 aa21.33■■□□□ 1.01
CDC42BPB-208ENST00000561271 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.33■■□□□ 1.01
CDC42BPB-208ENST00000561271 FOCADQ5VW36 1801 aa21.32■■□□□ 1
CDC42BPB-208ENST00000561271 A0A1B0GUL7 405 aa21.32■■□□□ 1
CDC42BPB-208ENST00000561271 PRDX5P30044 214 aa21.32■■□□□ 1
CDC42BPB-208ENST00000561271 CCDC102BQ68D86 513 aa21.32■■□□□ 1
CDC42BPB-208ENST00000561271 ITPRIPQ8IWB1 547 aa21.32■■□□□ 1
CDC42BPB-208ENST00000561271 REM2Q8IYK8 340 aaPredicted RBP21.32■■□□□ 1
CDC42BPB-208ENST00000561271 TEPSINQ96N21 525 aa21.32■■□□□ 1
CDC42BPB-208ENST00000561271 TNNI2P48788 182 aa21.31■■□□□ 1
CDC42BPB-208ENST00000561271 TIMM10P62072 90 aa21.31■■□□□ 1
CDC42BPB-208ENST00000561271 DIXDC1Q155Q3 683 aa21.31■■□□□ 1
CDC42BPB-208ENST00000561271 SPRYD7Q5W111 196 aa21.31■■□□□ 1
CDC42BPB-208ENST00000561271 APOBEC3HQ6NTF7 200 aaKnown RBP21.31■■□□□ 1
CDC42BPB-208ENST00000561271 ATAD5Q96QE3 1844 aa21.31■■□□□ 1
CDC42BPB-208ENST00000561271 SEMA3EO15041 775 aa21.3■■□□□ 1
CDC42BPB-208ENST00000561271 IREB2P48200 963 aaKnown RBP21.3■■□□□ 1
CDC42BPB-208ENST00000561271 RASGRF1Q13972 1273 aa21.3■■□□□ 1
CDC42BPB-208ENST00000561271 HHIPL2Q6UWX4 724 aa21.3■■□□□ 1
CDC42BPB-208ENST00000561271 ABHD8Q96I13 439 aa21.3■■□□□ 1
CDC42BPB-208ENST00000561271 TMOD2Q9NZR1 351 aa21.3■■□□□ 1
CDC42BPB-208ENST00000561271 DENND2AQ9ULE3 1009 aa21.3■■□□□ 1
CDC42BPB-208ENST00000561271 DAGLAQ9Y4D2 1042 aa21.3■■□□□ 1
CDC42BPB-208ENST00000561271 SALL1Q9NSC2 1324 aa21.29■■□□□ 1
CDC42BPB-208ENST00000561271 PTPRFP10586 1907 aa21.29■■□□□ 1
CDC42BPB-208ENST00000561271 USP2O75604 605 aaPredicted RBP21.29■■□□□ 1
CDC42BPB-208ENST00000561271 SLC10A4Q96EP9 437 aa21.29■■□□□ 1
CDC42BPB-208ENST00000561271 XAGE2Q96GT9 111 aa21.29■■□□□ 1
CDC42BPB-208ENST00000561271 WNK4Q96J92 1243 aa21.29■■□□□ 1
CDC42BPB-208ENST00000561271 AKAP2Q9Y2D5 859 aa21.29■■□□□ 1
CDC42BPB-208ENST00000561271 DOCK1Q14185 1865 aa21.28■■□□□ 1
CDC42BPB-208ENST00000561271 RPAP1Q9BWH6 1393 aaPredicted RBP21.28■■□□□ 1
CDC42BPB-208ENST00000561271 LDHBP07195 334 aaKnown RBP21.28■■□□□ 1
CDC42BPB-208ENST00000561271 SREBF2Q12772 1141 aa21.28■■□□□ 1
CDC42BPB-208ENST00000561271 MRIQ9BWK5 157 aa21.28■■□□□ 1
CDC42BPB-208ENST00000561271 MVPQ14764 893 aaKnown RBP21.27■■□□□ 1
CDC42BPB-208ENST00000561271 NEUROD6Q96NK8 337 aa21.27■■□□□ 1
CDC42BPB-208ENST00000561271 MCOLN1Q9GZU1 580 aa21.27■■□□□ 1
CDC42BPB-208ENST00000561271 TM4SF4P48230 202 aa21.26■□□□□ 0.99
CDC42BPB-208ENST00000561271 G3BP1Q13283 466 aaKnown RBP eCLIP21.26■□□□□ 0.99
CDC42BPB-208ENST00000561271 DGKZQ13574 1117 aa21.26■□□□□ 0.99
CDC42BPB-208ENST00000561271 POLA2Q14181 598 aa21.26■□□□□ 0.99
CDC42BPB-208ENST00000561271 ANKRD13AQ8IZ07 590 aa21.26■□□□□ 0.99
CDC42BPB-208ENST00000561271 PANK1Q8TE04 598 aa21.26■□□□□ 0.99
CDC42BPB-208ENST00000561271 PDS5AQ29RF7 1337 aaKnown RBP21.26■□□□□ 0.99
CDC42BPB-208ENST00000561271 PHIPQ8WWQ0 1821 aa21.25■□□□□ 0.99
CDC42BPB-208ENST00000561271 ZBTB48P10074 688 aaPredicted RBP21.25■□□□□ 0.99
CDC42BPB-208ENST00000561271 GJA5P36382 358 aa21.25■□□□□ 0.99
CDC42BPB-208ENST00000561271 FAM83AQ86UY5 434 aa21.25■□□□□ 0.99
CDC42BPB-208ENST00000561271 SSH3Q8TE77 659 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms